You are here

Home

CAN33_27750-T1, CAN33_27750-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27750-T1
Unique NameCAN33_27750-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3849944..3850438+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27750-T1 ID=CAN33_27750-T1|Name=CAN33_27750-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=495bp|location=Sequence derived from alignment at NKJJ01000002.1:3849944..3850438+ (Aspergillus niger FDAARGOS_311)
ATGCTAGGCGATGGACTGAGCTGGCCGACGGACCTGGACCACGACTTCAG
CAACTGCTTCGATAAAACAAAGGACGTTACAGCGGCTGTCACGAGCATGC
CGACCTCCGCGTCACCTTCGGCGATGGCCGCAACAGCGAGCGCCCAGAAC
GCGATGCGGTGGCTGGAGTCTGATGTCTACTATCCTTTTCCGCCGTCGCC
GCCCAACGTCGACCCCATGCTGCGCTCCGTGCCGAGCACCATCTCCGACA
CACATCAACGGATCGCCTCAGGGTGTTCCTTGTCCAGCCGTGATCCCGAG
GCGGACGAACCCTTGATCCACATCGCCATTTCGCGCGGCACAATTGACAC
TCTTCAATTGTTGCTCATGACCTACCCCATCTCAGTGAATGTCCGTGACC
GGGCGGGCTACACGCCGCTCCAACGAGCTGTCATCACTGGAAGGACAGAC
ATGATGAAACTGCTCATTGAACATGGTGCCGACGCGGGGCTATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:3849944..3850438+

>CAN33_27750-T1 ID=CAN33_27750-T1|Name=CAN33_27750-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=495bp|location=Sequence derived from alignment at NKJJ01000002.1:3849944..3850438+ (Aspergillus niger FDAARGOS_311)
ATGCTAGGCGATGGACTGAGCTGGCCGACGGACCTGGACCACGACTTCAG
CAACTGCTTCGATAAAACAAAGGACGTTACAGCGGCTGTCACGAGCATGC
CGACCTCCGCGTCACCTTCGGCGATGGCCGCAACAGCGAGCGCCCAGAAC
GCGATGCGGTGGCTGGAGTCTGATGTCTACTATCCTTTTCCGCCGTCGCC
GCCCAACGTCGACCCCATGCTGCGCTCCGTGCCGAGCACCATCTCCGACA
CACATCAACGGATCGCCTCAGGGTGTTCCTTGTCCAGCCGTGATCCCGAG
GCGGACGAACCCTTGATCCACATCGCCATTTCGCGCGGCACAATTGACAC
TCTTCAATTGTTGCTCATGACCTACCCCATCTCAGTGAATGTCCGTGACC
GGGCGGGCTACACGCCGCTCCAACGAGCTGTCATCACTGGAAGGACAGAC
ATGATGAAACTGCTCATTGAACATGGTGCCGACGCGGGGCTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27750CAN33_27750Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27750-T1.exon1CAN33_27750-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27750-T1.cdsCAN33_27750-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27750-T1CAN33_27750-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.19
NoteEggNog:ENOG41
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
ProductAnkyrin repeats (many copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3849944..3850438 +
Powered by Drupal