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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3852163..3853226- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_27755-T1 ID=CAN33_27755-T1|Name=CAN33_27755-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1064bp|location=Sequence derived from alignment at NKJJ01000002.1:3852163..3853226- (Aspergillus niger FDAARGOS_311)
ATGACGAACTGCACTACCGATTGGAGCAATGTCACGCTCGCTACTTTCAA
CCAGACTCTACTCAATGATACCTCATTGTGTACGAAATGCACCTGTCCTC
TCGTCCTGGACGGCGAGCAGCTGTCATGGGTGCGATACTACCCGAATCTG
GCGGGCAACGTCCTCTACGCAGTCCTCTTCGGCCTCTTTCTCGTGCTGCA
GCTCTTCTTCGGCATCTCGCGCAAGACCCGGGGATACATGATTGGCATGA
CACTTGGTTTGATTCTTGAAGTCTTGGGCTACGTCGGACGGATTCTCCTC
CGCTACTCGATGTTCGAATTCTCATGGTTCCTGATGTGAGTTTCCCTCTA
AAATAAAACCTAAGGTGTGAAAATTAACAACCATGACAGGTATCTCGTTC
CTCTCACCATCGCCCCGGCCTTCATCTCCGCAGCCATCTATCTGACCCTA
TCGCGGATCATCACGATCTATGGCGCCGAGCACGCTCGCTTCCGCCCCCA
GGTCTACACCTACATCTTCATCACCTTCGACATCATCGCCCTTCTTCTGC
AAGCCGTGGGCGGCGCCGTCGCCTCCGTCGCTGACGCCTACTCATCCATG
CAGGACCAGGGTGTGCACGTCATGGTCGGCGGCCTTGCGTGGCAGGTGGT
GTCGCTGTTCATCTTCTCGTGCCTGGGTCTGGACTTCTATCTGCGCGTGA
GCCGGGCTAGCCGCAAAGGAGTCCCTCTCAACCCGGCGTTTGATTCGCTA
CGCGCACAGCGGTCCTTCGAGCCGTGGTTCATTGTGTCCCTGTCTCTGGC
CGTCTTGTTTATCTTTGTGCGGAGTGTGTTCCGGTGTGCTGAGCTACAGG
GTGGATTTGGCGGCAAGTTGGCCAATGAGGAGATTACGTTCATGGTGCTG
GAGGGAGCGATGATGGTGCTGGCTTGTGGGTTGTTGACTTTCTTCCACCC
CGGGTTGATTTTGGGGGCTAGGGAATGGGCGCTGGCTAAGTGGAGTCGCG
GTGGTAAGGGGGTCTAGATCAGATTCATTTTCTTTGGGGAATGAGGCTGA
GTGCAGGGGATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3852163..3853226- >CAN33_27755-T1 ID=CAN33_27755-T1|Name=CAN33_27755-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3000bp|location=Sequence derived from alignment at NKJJ01000002.1:3852163..3853226- (Aspergillus niger FDAARGOS_311)
GGGATTGAGACCAGGGTGTGCACGTCATGGTCGGCGGCCTTGCGTGGCAG
GTGGTGTCGCTGTTCATCTTCTCGTGCCTGGGTCTGGACTTCTATCTGCG
CGTGAGCCGGGCTAGCCGCAAAGGAGTCCCTCTCAACCCGGCGTTTGATT
CGCTACGCGCACAGCGGTCCTTCGAGCCGTGGTTCATTGTGTCCCTGTCT
CTGGCCGTCTTGTTTATCTTTGTGCGGAGTGTGTTCCGGTGTGCTGAGCT
ACAGGGTGGATTTGGCGGCAAGTTGGCCAATGAGGAGATTACGTTCATGG
TGCTGGAGGGAGCGATGATGGTGCTGGCTTGTGGGTTGTTGACTTTCTTC
CACCCCGGGTTGATTTTGGGGGCTAGGGAATGGGCGCTGGCTAAGTGGAG
TCGCGGTGGTATCTCATGACGAACTGCACTACCGATTGGAGCAATGTCAC
GCTCGCTACTTTCAACCAGACTCTACTCAATGATACCTCATTGTGTACGA
AATGCACCTGTCCTCTCGTCCTGGACGGCGAGCAGCTGTCATGGGTGCGA
TACTACCCGAATCTGGCGGGCAACGTCCTCTACGCAGTCCTCTTCGGCCT
CTTTCTCGTGCTGCAGCTCTTCTTCGGCATCTCGCGCAAGACCCGGGGAT
ACATGATTGGCATGACACTTGGTTTGATTCTTGAAGTCTTGGGCTACGTC
GGACGGATTCTCCTCCGCTACTCGATGTTCGAATTCTCATGGTTCCTGAT
GGGATTGAGACCAGGGTGTGCACGTCATGGTCGGCGGCCTTGCGTGGCAG
GTGGTGTCGCTGTTCATCTTCTCGTGCCTGGGTCTGGACTTCTATCTGCG
CGTGAGCCGGGCTAGCCGCAAAGGAGTCCCTCTCAACCCGGCGTTTGATT
CGCTACGCGCACAGCGGTCCTTCGAGCCGTGGTTCATTGTGTCCCTGTCT
CTGGCCGTCTTGTTTATCTTTGTGCGGAGTGTGTTCCGGTGTGCTGAGCT
ACAGGGTGGATTTGGCGGCAAGTTGGCCAATGAGGAGATTACGTTCATGG
TGCTGGAGGGAGCGATGATGGTGCTGGCTTGTGGGTTGTTGACTTTCTTC
CACCCCGGGTTGATTTTGGGGGCTAGGGAATGGGCGCTGGCTAAGTGGAG
TCGCGGTGGTATCTCATGACGAACTGCACTACCGATTGGAGCAATGTCAC
GCTCGCTACTTTCAACCAGACTCTACTCAATGATACCTCATTGTGTACGA
AATGCACCTGTCCTCTCGTCCTGGACGGCGAGCAGCTGTCATGGGTGCGA
TACTACCCGAATCTGGCGGGCAACGTCCTCTACGCAGTCCTCTTCGGCCT
CTTTCTCGTGCTGCAGCTCTTCTTCGGCATCTCGCGCAAGACCCGGGGAT
ACATGATTGGCATGACACTTGGTTTGATTCTTGAAGTCTTGGGCTACGTC
GGACGGATTCTCCTCCGCTACTCGATGTTCGAATTCTCATGGTTCCTGAT
GGGATTGAGACCAGGGTGTGCACGTCATGGTCGGCGGCCTTGCGTGGCAG
GTGGTGTCGCTGTTCATCTTCTCGTGCCTGGGTCTGGACTTCTATCTGCG
CGTGAGCCGGGCTAGCCGCAAAGGAGTCCCTCTCAACCCGGCGTTTGATT
CGCTACGCGCACAGCGGTCCTTCGAGCCGTGGTTCATTGTGTCCCTGTCT
CTGGCCGTCTTGTTTATCTTTGTGCGGAGTGTGTTCCGGTGTGCTGAGCT
ACAGGGTGGATTTGGCGGCAAGTTGGCCAATGAGGAGATTACGTTCATGG
TGCTGGAGGGAGCGATGATGGTGCTGGCTTGTGGGTTGTTGACTTTCTTC
CACCCCGGGTTGATTTTGGGGGCTAGGGAATGGGCGCTGGCTAAGTGGAG
TCGCGGTGGTATCTCATGACGAACTGCACTACCGATTGGAGCAATGTCAC
GCTCGCTACTTTCAACCAGACTCTACTCAATGATACCTCATTGTGTACGA
AATGCACCTGTCCTCTCGTCCTGGACGGCGAGCAGCTGTCATGGGTGCGA
TACTACCCGAATCTGGCGGGCAACGTCCTCTACGCAGTCCTCTTCGGCCT
CTTTCTCGTGCTGCAGCTCTTCTTCGGCATCTCGCGCAAGACCCGGGGAT
ACATGATTGGCATGACACTTGGTTTGATTCTTGAAGTCTTGGGCTACGTC
GGACGGATTCTCCTCCGCTACTCGATGTTCGAATTCTCATGGTTCCTGAT
GGGATTGAGACCAGGGTGTGCACGTCATGGTCGGCGGCCTTGCGTGGCAG
GTGGTGTCGCTGTTCATCTTCTCGTGCCTGGGTCTGGACTTCTATCTGCG
CGTGAGCCGGGCTAGCCGCAAAGGAGTCCCTCTCAACCCGGCGTTTGATT
CGCTACGCGCACAGCGGTCCTTCGAGCCGTGGTTCATTGTGTCCCTGTCT
CTGGCCGTCTTGTTTATCTTTGTGCGGAGTGTGTTCCGGTGTGCTGAGCT
ACAGGGTGGATTTGGCGGCAAGTTGGCCAATGAGGAGATTACGTTCATGG
TGCTGGAGGGAGCGATGATGGTGCTGGCTTGTGGGTTGTTGACTTTCTTC
CACCCCGGGTTGATTTTGGGGGCTAGGGAATGGGCGCTGGCTAAGTGGAG
TCGCGGTGGTATCTCATGACGAACTGCACTACCGATTGGAGCAATGTCAC
GCTCGCTACTTTCAACCAGACTCTACTCAATGATACCTCATTGTGTACGA
AATGCACCTGTCCTCTCGTCCTGGACGGCGAGCAGCTGTCATGGGTGCGA
TACTACCCGAATCTGGCGGGCAACGTCCTCTACGCAGTCCTCTTCGGCCT
CTTTCTCGTGCTGCAGCTCTTCTTCGGCATCTCGCGCAAGACCCGGGGAT
ACATGATTGGCATGACACTTGGTTTGATTCTTGAAGTCTTGGGCTACGTC
GGACGGATTCTCCTCCGCTACTCGATGTTCGAATTCTCATGGTTCCTGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000021.19 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3852163..3853226 - |
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