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CAN33_2780-T1, CAN33_2780-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2780-T1
Unique NameCAN33_2780-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1723122..1727279-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2780-T1 ID=CAN33_2780-T1|Name=CAN33_2780-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=4158bp|location=Sequence derived from alignment at NKJJ01000004.1:1723122..1727279- (Aspergillus niger FDAARGOS_311)
ATGTCCGCCACCGCGGAGGTCCTGGTGATTTCCTCCTCGCCGGAGCGCAA
CCCAGTTCACACGCCAGCGCCGCCTGCGTATGATCCCGAAAGACTCTTTG
GATTGTCCCCAGTAGACGTTGAAACGACTCCGCTGCCGTCTCCGTCGGAC
TTGTTTTGTCCTCCGACGCATTCTAGGTTTTTCGAGGTTGGGAATCAGGT
CGACGAATTGCGCCGAGATGAAACCCGCAAGAAGTCTAGTACCTTGACGA
ATGATGATTCCGCTGTTACAACGCTAGAGGGAGAACCGGCGACAGATAAA
CCGAAGCGAAGGGGTAGGCCAAAGAAGGAGCAGAAAAGAGCTACGGAGGA
GCTGGGGCCCTGTGTTACGGGCAACGAGAAGACTACTACGAAAAAGACTA
TCACAGGAACTAGTAAGAAACGCGCTCAACCTGCGACAAAGCGCTCGAAG
CAGGCGAATAAGACTATTTCTGGGAGGGTTGCGAAGGCGGGCACTCCGCA
AGTCAAGGAGGCGGGCGAGAAGGCTATTTGTCCGTCGACACCAACGACTG
CTCTGCCCCTGAAGGCTACGAATGATGTGCTGGAATGGGAAAGGGATGGC
TTACAGCTTGAGCAAGCGATGACGCGGAGATTGGACTGGACACCTACAGT
CAATAAGGTTAAGGAAGTCGTTGAGTTGGAAGGGAAGTCAGGGTCAGATG
ATAATACAAGGGGTTTTGGTAACCTGCTGTCGGAGTATGGGTTTAATGGA
GCTGCTGCTCCTGTAAACGACTTTATGGCCTCTGTCGAAGGTGGACCGAC
GAAGCGAAGGCGGATAGAGCTGGTTGATCCCGGAGTATATCCTGCTCCCA
GACAAAGTGTCGCCGACGATAGTGAGAAGGATAACACAGAGGGAACCCGC
AAATCAACACCAGCTGCGCGAAAGAAGCCGACGAAGCGTGCCAACAAATT
TACCACTCTCACTGCCCGCGTGACAGCGAAGTATATCAACGAGTCTACGG
AGGGTTCAGATGTCGTAGACGAAGAGACACCGAAAGCGAAGCCTAAAGTT
TCAAGATCCAAGAAAAAGGGCCAGGCAAGCAAGTCTTACGAACCCGAGTT
CGTGGTGCTTTCTCCCGAAGAAGCTGCTAAGTCCCTCGATGATCAAGAGC
TGGTATTTGGCACATGCAGCCAGCTGGAGCGGGAAGACTCACCCACTACT
ATAAGAGAGCTGCAGGCAGCTATTAGCGAGTCGGAACGAAGCATGACGTT
GGAAGCCAGCGGTCGTCCGCATCGAACGCAAAGCAAGGGCTCATCCTCTA
CAGTCTCACGCTTCAATGGCTCAGGAAACTTGTGGTCGGTCGCATCTCGG
GATGTTGACGGTTCACTAATGCAGGTAGAAGTGGTGGATCTGGTGAATTC
GCCTGATAGATCTGGGACTATCACTCTGGATGAGCGACCTAGCAACGCCA
AGAGAGTAGCTGAAGCCGAATGCAATACCAGCGACATCAACCCTACCCAG
AAAGGTAGCGACCAGGCAAAAGCTGCTTCGACAAGCGAAACACAGCCTGT
TGTACCTTCAACCACTCAGTCAAAGAACAAAAAGGCCGAGAATACCACAT
CCATTGCCCGCAAGCCCGACCCTAAGATGCCGCAATACGACAACTTCACA
GATGCCCAGCTATCGAAACAAGCCGCCTCATTCGGCTTCAAACCGCTCAA
AAACCGGAAGAAGATGATTGAGCTGCTTGAAAAGTGCTGGAAAGCAAAGA
ACAGCATATCATCAGAGGCAAACAACGAGAATACAGATCAGGAAACGCCT
GCTGAACCTGAATCAGCACCTGAGCCTGGTAATAAGCCAAAGGGGAAAGG
AACAACACGGAAAACCACCACGAAGGCGAAAGCCAAAACTCAACCTAGTA
CATCATCAAAGTCAACAACCGAAGCCATCTCAACAACAAAATCTCCAAGC
AATCCCAACTCTAACACCACAACCTCAACCTCAACCTCAATTTCCAAACC
TACCCCTTCCTACGCCAACGTCGAGGAAATCGAAGACTCCGAAGAAGACT
CCGACCCCATCTCCTTCCCCTCTCCCAGCCGCCTCCTACCCCAGACCCTC
CAAACAAATCACAAACACGCCCACACCCTCCCTACATCCAACTTACCATC
AAGTCCTAATCGAACCACATCCACATCCGTTCCCAAAGAACCAGAACCCC
CCGCCATACTTCTCCCCCTAACTGAGCAAATCACCAAAGCCGTGCGTGCC
CAATCCGCAGCCCACCCTGCATCATCCAACAGCAATAAGACTCACACAAG
GAAACAAACATGGCACGAGAAAATTCTCATGTACGACCCTATTCCTTTGG
AGGAGTTCACCACTTGGTTAAACACAGAGGGACTGGGTCTCGTGAATGAG
GATCGGGAGGTCGGGGCGGGGTTCGTGAGGAGGTGGTGTGAGAGTAAGGG
GGTGGTTTGTTGTTATAGGCCGAGGAAGAAGGAGTGATGCGTTCTCAGTT
GAATATAGATTATTTGGATTTGGAGTGGGTATTGGGGCTGAGTATTTTTT
GGGAGATTACGTTATTTTATTACTGTATTGATTTTTGGGAAGGGGTGGGT
TCATAAGTTTGAGGTGGTTATTGGAGTCATGGATGCATGTATAGTTAGTA
GGAGCCTTGGATTTTAGGTTAGGGTTTGGGTTGATATGGCTCGGTGTAGT
TGGTTTGATTGGTTCAGAGGATGGGAATACTACTACTACTACTACTACTA
CTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACT
ACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTAC
TACTACTACTACTACTACTACTACTACTAGTGTAGTAGAAGAAATTTTTC
GGGTTTTATAGAGTAATCAAATACTGCAAAGAATGGTAACGGTACAAGTA
TCATTGAAAATGTGCATACTTGACTCATAAACAATAAAAAAAATAATATT
AACAAAACATTAAGTCATAACAACTAGTAACAAATGAAACAATATTTGCT
CCCCAACATTACCTATTCGTAATCACTTTTTCATCGTAGTTTTCCAATAA
TTAAACATCATTCCGTCGTATATAACCCCTACCCCCAAGGCATAAGAGGA
AGAGTCCTCCCTTCTACTACTATGCCACACGTCCCACTTAAGCAAGAGGG
GAGGGCCTAAAGAGGAGAGTCGATCAATAGCAAAGCAAGTAGATAACTAT
TTGGAGATAGTATGTCCACAAGAAGAACTGAAAACAACTGTACATCTCCT
CAGATACCCCAGACTTAAAGTTACTCAAAAGCAAGTCCCAGTACCCCAAC
CTACTGCTGCGGCTGCTGCTGCTGCTGCTTCTTCTTCCTTCCACCACCCC
TCTTCGCCCTCTTATGAGACGTAGCATCAGAAGCAGTGGCAGTAGTGGCA
GTAGTAGTCGCCGCCGAGGTCGGAGGCTGCGAAACACCTGCCGATGAAGA
AGGCACACCAGCCAAGCTCATATCTTCAGGCGGGTAGGCCGAGACCCCGG
GTATGTTCGACCATCCTATAGCGGGGTCAGTACCATAGTAACTATATTCA
TTTGCAGTGAGAAGCCGTTCGAAATTAGGATCAGATAGATCGGCATATGC
AGCGGCAGCGAGTTGGGCGTCGTCTTGACCTGTGTTACCCTGCTCGTAGG
GGTAATGGGATGAGTATCCGGGAGTGTTGATTTGGGGGAGGGTTTCGTAG
TTGGTGGGCTGCTTGGGGGTGGCGGGGAGGTTGGCGTTGGCCATCTGCTG
CTGCTGTTGCTGCTGCTGGTATTGGTATCTGGCGAGGTCTTCAAGGGCAC
TGGAGTGTACCTGTCGGGCAGCATGGGCGAACATGTTGTTGTTGCCCTGC
ATGGAGGAGGTCTCGGATCGGGGCCAACGTGTTGAGATGGAGGATTCGGT
CGCAGGTGGTGCTGGAACGGTGGTGGAGGGCTGAGCAGCATGACGTTGCT
GTTTCAGCTGCTGCTGCTGCTGCTGCTGGGGTTGTGGCCGGGGTTGCTGA
TAACCCCGGGGAAGGGCGAAGAAGGGCTGATTAGCTAGGTAAGGCGTAGT
GGGTGGAAAGTTGGGTGGGAATTGGCCCGACGGCAGCTGATTGAATTGAG
CGTTGTAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1723122..1727279-

>CAN33_2780-T1 ID=CAN33_2780-T1|Name=CAN33_2780-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3672bp|location=Sequence derived from alignment at NKJJ01000004.1:1723122..1727279- (Aspergillus niger FDAARGOS_311)
CGTTGTAGATGTCCGCCACCGCGGAGGTCCTGGTGATTTCCTCCTCGCCG
GAGCGCAACCCAGTTCACACGCCAGCGCCGCCTGCGTATGATCCCGAAAG
ACTCTTTGGATTGTCCCCAGTAGACGTTGAAACGACTCCGCTGCCGTCTC
CGTCGGACTTGTTTTGTCCTCCGACGCATTCTAGGTTTTTCGAGGTTGGG
AATCAGGTCGACGAATTGCGCCGAGATGAAACCCGCAAGAAGTCTAGTAC
CTTGACGAATGATGATTCCGCTGTTACAACGCTAGAGGGAGAACCGGCGA
CAGATAAACCGAAGCGAAGGGGTAGGCCAAAGAAGGAGCAGAAAAGAGCT
ACGGAGGAGCTGGGGCCCTGTGTTACGGGCAACGAGAAGACTACTACGAA
AAAGACTATCACAGGAACTAGTAAGAAACGCGCTCAACCTGCGACAAAGC
GCTCGAAGCAGGCGAATAAGACTATTTCTGGGAGGGTTGCGAAGGCGGGC
ACTCCGCAAGTCAAGGAGGCGGGCGAGAAGGCTATTTGTCCGTCGACACC
AACGACTGCTCTGCCCCTGAAGGCTACGAATGATGTGCTGGAATGGGAAA
GGGATGGCTTACAGCTTGAGCAAGCGATGACGCGGAGATTGGACTGGACA
CCTACAGTCAATAAGGTTAAGGAAGTCGTTGAGTTGGAAGGGAAGTCAGG
GTCAGATGATAATACAAGGGGTTTTGGTAACCTGCTGTCGGAGTATGGGT
TTAATGGAGCTGCTGCTCCTGTAAACGACTTTATGGCCTCTGTCGAAGGT
GGACCGACGAAGCGAAGGCGGATAGAGCTGGTTGATCCCGGAGTATATCC
TGCTCCCAGACAAAGTGTCGCCGACGATAGTGAGAAGGATAACACAGAGG
GAACCCGCAAATCAACACCAGCTGCGCGAAAGAAGCCGACGAAGCGTGCC
AACAAATTTACCACTCTCACTGCCCGCGTGACAGCGAAGTATATCAACGA
GTCTACGGAGGGTTCAGATGTCGTAGACGAAGAGACACCGAAAGCGAAGC
CTAAAGTTTCAAGATCCAAGAAAAAGGGCCAGGCAAGCAAGTCTTACGAA
CCCGAGTTCGTGGTGCTTTCTCCCGAAGAAGCTGCTAAGTCCCTCGATGA
TCAAGAGCTGGTATTTGGCACATGCAGCCAGCTGGAGCGGGAAGACTCAC
CCACTACTATAAGAGAGCTGCAGGCAGCTATTAGCGAGTCGGAACGAAGC
ATGACGTTGGAAGCCAGCGGTCGTCCGCATCGAACGCAAAGCAAGGGCTC
ATCCTCTACAGTCTCACGCTTCAATGGCTCAGGAAACTTGTGGTCGGTCG
CATCTCGGGATGTTGACGGTTCACTAATGCAGGTAGAAGTGGTGGATCTG
GTGAATTCGCCTGATAGATCTGGGACTATCACTCTGGATGAGCGACCTAG
CAACGCCAAGAGAGTAGCTGAAGCCGAATGCAATACCAGCGACATCAACC
CTACCCAGAAAGGTAGCGACCAGGCAAAAGCTGCTTCGACAAGCGAAACA
CAGCCTGTTGTACCTTCAACCACTCAGTCAAAGAACAAAAAGGCCGAGAA
TACCACATCCATTGCCCGCAAGCCCGACCCTAAGATGCCGCAATACGACA
ACTTCACAGATGCCCAGCTATCGAAACAAGCCGCCTCATTCGGCTTCAAA
CCGCTCAAAAACCGGAAGAAGATGATTGAGCTGCTTGAAAAGTGCTGGAA
AGCAAAGAACAGCATATCATCAGAGGCAAACAACGAGAATACAGATCAGG
AAACGCCTGCTGAACCTGAATCAGCACCTGAGCCTGCGTTGTAGATGTCC
GCCACCGCGGAGGTCCTGGTGATTTCCTCCTCGCCGGAGCGCAACCCAGT
TCACACGCCAGCGCCGCCTGCGTATGATCCCGAAAGACTCTTTGGATTGT
CCCCAGTAGACGTTGAAACGACTCCGCTGCCGTCTCCGTCGGACTTGTTT
TGTCCTCCGACGCATTCTAGGTTTTTCGAGGTTGGGAATCAGGTCGACGA
ATTGCGCCGAGATGAAACCCGCAAGAAGTCTAGTACCTTGACGAATGATG
ATTCCGCTGTTACAACGCTAGAGGGAGAACCGGCGACAGATAAACCGAAG
CGAAGGGGTAGGCCAAAGAAGGAGCAGAAAAGAGCTACGGAGGAGCTGGG
GCCCTGTGTTACGGGCAACGAGAAGACTACTACGAAAAAGACTATCACAG
GAACTAGTAAGAAACGCGCTCAACCTGCGACAAAGCGCTCGAAGCAGGCG
AATAAGACTATTTCTGGGAGGGTTGCGAAGGCGGGCACTCCGCAAGTCAA
GGAGGCGGGCGAGAAGGCTATTTGTCCGTCGACACCAACGACTGCTCTGC
CCCTGAAGGCTACGAATGATGTGCTGGAATGGGAAAGGGATGGCTTACAG
CTTGAGCAAGCGATGACGCGGAGATTGGACTGGACACCTACAGTCAATAA
GGTTAAGGAAGTCGTTGAGTTGGAAGGGAAGTCAGGGTCAGATGATAATA
CAAGGGGTTTTGGTAACCTGCTGTCGGAGTATGGGTTTAATGGAGCTGCT
GCTCCTGTAAACGACTTTATGGCCTCTGTCGAAGGTGGACCGACGAAGCG
AAGGCGGATAGAGCTGGTTGATCCCGGAGTATATCCTGCTCCCAGACAAA
GTGTCGCCGACGATAGTGAGAAGGATAACACAGAGGGAACCCGCAAATCA
ACACCAGCTGCGCGAAAGAAGCCGACGAAGCGTGCCAACAAATTTACCAC
TCTCACTGCCCGCGTGACAGCGAAGTATATCAACGAGTCTACGGAGGGTT
CAGATGTCGTAGACGAAGAGACACCGAAAGCGAAGCCTAAAGTTTCAAGA
TCCAAGAAAAAGGGCCAGGCAAGCAAGTCTTACGAACCCGAGTTCGTGGT
GCTTTCTCCCGAAGAAGCTGCTAAGTCCCTCGATGATCAAGAGCTGGTAT
TTGGCACATGCAGCCAGCTGGAGCGGGAAGACTCACCCACTACTATAAGA
GAGCTGCAGGCAGCTATTAGCGAGTCGGAACGAAGCATGACGTTGGAAGC
CAGCGGTCGTCCGCATCGAACGCAAAGCAAGGGCTCATCCTCTACAGTCT
CACGCTTCAATGGCTCAGGAAACTTGTGGTCGGTCGCATCTCGGGATGTT
GACGGTTCACTAATGCAGGTAGAAGTGGTGGATCTGGTGAATTCGCCTGA
TAGATCTGGGACTATCACTCTGGATGAGCGACCTAGCAACGCCAAGAGAG
TAGCTGAAGCCGAATGCAATACCAGCGACATCAACCCTACCCAGAAAGGT
AGCGACCAGGCAAAAGCTGCTTCGACAAGCGAAACACAGCCTGTTGTACC
TTCAACCACTCAGTCAAAGAACAAAAAGGCCGAGAATACCACATCCATTG
CCCGCAAGCCCGACCCTAAGATGCCGCAATACGACAACTTCACAGATGCC
CAGCTATCGAAACAAGCCGCCTCATTCGGCTTCAAACCGCTCAAAAACCG
GAAGAAGATGATTGAGCTGCTTGAAAAGTGCTGGAAAGCAAAGAACAGCA
TATCATCAGAGGCAAACAACGAGAATACAGATCAGGAAACGCCTGCTGAA
CCTGAATCAGCACCTGAGCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0033557Slx1-Slx4 complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:00171085'-flap endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SLX4CAN33_2780Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2780-T1CAN33_2780-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2780-T1.cdsCAN33_2780-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2780-T1.exon2CAN33_2780-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2780-T1.exon1CAN33_2780-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027784
Product5'-flap endonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1723122..1727279 -
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