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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3884840..3885649- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_27800-T1 ID=CAN33_27800-T1|Name=CAN33_27800-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=810bp|location=Sequence derived from alignment at NKJJ01000002.1:3884840..3885649- (Aspergillus niger FDAARGOS_311)
ATGCTACGTCTTGACGGCAAAGTCGCCCTTATCACCGGCCTCGGCCAGAC
CACCGACGAAGGCTGGGGTATCGGTGCCGCCATCGCCATGAAACTCTCCC
AGCAAGGCGCAATTATTTTCGGAGGCAATCGCACATTATCCAGTGCCGAA
AGAACAAAAGCCCGAATTGAAAAGGAGGGCGGAACATGCGAAGTCCAAGA
AACAAACGTCACAGATTCCACATCCGTCAAAGCTCTCGTGGATAGCTGCA
TGCAACGCCACGGGCGCATCGACATCCTGATCAACAACGTGGGAAAATCG
GAGCCAGGTGGCCCTGCCGAGCTAAGCGAGGAAACGTGGGACCAACAAGT
TGATCTGAACCTGAAAAGCGTCTATCTGACGAGTCATTTTGTGCTTCCTA
TTATGGAGAAGCAGGAGACGGGCGGCACGGTGATAAATGTGTCGAGCATT
GCAGGGCTGCGGTATATCGGGAAGCCGCAGGTTGCATATTCGGCTACGAA
AGCGGCCATTATGCAGTTCACGAAGGCCACGGCGGTGATATATGCGGGGA
AGGGAGTGAGGTTGAATACTGTTGTTCCTGGGCTGATTTATACGCCGTAC
ACTCGTGACCTTGCGAAGCGGTATGCTCCTGGGGGTGATGAAGAGGCGTA
CATGAAGAAGCGCGATGAACAGGTGCCAATGGGACGCATGGGAGATGCTT
GGGATGTGGCTAATGCCACGGTGTTTCTCGCTTCGGATGAGGCACGGTAT
ATCACGGGACAGGAGCTGGTGGTGGATGGAGGGATTACTTCTTCTACAGG
GAGAGTATAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3884840..3885649- >CAN33_27800-T1 ID=CAN33_27800-T1|Name=CAN33_27800-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=810bp|location=Sequence derived from alignment at NKJJ01000002.1:3884840..3885649- (Aspergillus niger FDAARGOS_311)
ATGCTACGTCTTGACGGCAAAGTCGCCCTTATCACCGGCCTCGGCCAGAC
CACCGACGAAGGCTGGGGTATCGGTGCCGCCATCGCCATGAAACTCTCCC
AGCAAGGCGCAATTATTTTCGGAGGCAATCGCACATTATCCAGTGCCGAA
AGAACAAAAGCCCGAATTGAAAAGGAGGGCGGAACATGCGAAGTCCAAGA
AACAAACGTCACAGATTCCACATCCGTCAAAGCTCTCGTGGATAGCTGCA
TGCAACGCCACGGGCGCATCGACATCCTGATCAACAACGTGGGAAAATCG
GAGCCAGGTGGCCCTGCCGAGCTAAGCGAGGAAACGTGGGACCAACAAGT
TGATCTGAACCTGAAAAGCGTCTATCTGACGAGTCATTTTGTGCTTCCTA
TTATGGAGAAGCAGGAGACGGGCGGCACGGTGATAAATGTGTCGAGCATT
GCAGGGCTGCGGTATATCGGGAAGCCGCAGGTTGCATATTCGGCTACGAA
AGCGGCCATTATGCAGTTCACGAAGGCCACGGCGGTGATATATGCGGGGA
AGGGAGTGAGGTTGAATACTGTTGTTCCTGGGCTGATTTATACGCCGTAC
ACTCGTGACCTTGCGAAGCGGTATGCTCCTGGGGGTGATGAAGAGGCGTA
CATGAAGAAGCGCGATGAACAGGTGCCAATGGGACGCATGGGAGATGCTT
GGGATGTGGCTAATGCCACGGTGTTTCTCGCTTCGGATGAGGCACGGTAT
ATCACGGGACAGGAGCTGGTGGTGGATGGAGGGATTACTTCTTCTACAGG
GAGAGTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000021.19 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3884840..3885649 - |
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