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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:4003869..4004732- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_28035-T1 ID=CAN33_28035-T1|Name=CAN33_28035-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=864bp|location=Sequence derived from alignment at NKJJ01000002.1:4003869..4004732- (Aspergillus niger FDAARGOS_311)
ATGGCTCTACCAGCTTGCAATCTGCTCAAGGGCAAAACAGCTGCCATCAC
CGGCGGCACGACAGGAATCGGGCGTGCGATCGCATTGGCCTTCATCACCC
AAGGCTGCAATGTTGCAGTCAACCATCTGGGTCTCCCCCAAGACGAGGTG
CATCGGCACAGTCTGCTTGACGAAGTCAAGTCCATCCAACAAGGCGGCAT
TGCGGCTGGCAAGATTCTCGAGATTCCGGGCGATGTGACTGCCCCGGAGA
CCAGCATAAACCTCGTCAAAGAAGCCGTTTCTCAATGGGGGAAGCTAGAT
ATTTTTGTCGCCAACGCAGGCGTGTTCAAACAAGCTGAATTTCTCCAGTG
AGTCTATTATCCTATAGTGAACGACAGAGAAGTGGTCACTAACATACCCA
GGATCGAGTCGTCTCTTCTCGACCACAGCATCGACGTCAACATCAAAGGC
TGCTTCTACTCCTGCCAAGCAGCTGCCCGGCAGATGGTCAAGCAGGGCCA
TGGCGGCTCCATCATCGGTATCTCCTCCGTCAGCGCGCTGGTCGGTGGAG
GCCTCCAGACCCACTACACGCCCACTAAGGCCGCTGTGCTTTCCATGATG
CAGTCCATGGCCATTTCTCTGGGCAAGGATCGGATCAGATGCAATGCTCT
GATGCCTGGGACCATCGCTACTCAGTTGGCTGATCATGATATGAAGAACC
CTACCAAGAAGGCTGCGCTCGAGGCGCGCATTCCGTTGGGGCGGATCGGA
AACCCGGACGATATGGCTGGCCCAGCGGTATTTCTGGCTTGTGAGGAGAT
GAGTCGATATGTAAATGCCACAGGGCTGTTGGCAGACGGTGGGATGTTTA
GTAACTTGCAATAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:4003869..4004732- >CAN33_28035-T1 ID=CAN33_28035-T1|Name=CAN33_28035-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1620bp|location=Sequence derived from alignment at NKJJ01000002.1:4003869..4004732- (Aspergillus niger FDAARGOS_311)
GATCGAGTCGTCTCTTCTCGACCACAGCATCGACGTCAACATCAAAGGCT
GCTTCTACTCCTGCCAAGCAGCTGCCCGGCAGATGGTCAAGCAGGGCCAT
GGCGGCTCCATCATCGGTATCTCCTCCGTCAGCGCGCTGGTCGGTGGAGG
CCTCCAGACCCACTACACGCCCACTAAGGCCGCTGTGCTTTCCATGATGC
AGTCCATGGCCATTTCTCTGGGCAAGGATCGGATCAGATGCAATGCTCTG
ATGCCTGGGACCATCGCTACTCAGTTGGCTGATCATGATATGAAGAACCC
TACCAAGAAGGCTGCGCTCGAGGCGCGCATTCCGTTGGGGCGGATCGGAA
ACCCGGACGATATGGCTGGCCCAGCGGTATTTCTGGCTTGTGAGGAGATG
AGTCGATATGTAAATGCCACAGGGCTGTTGGCAGACGGTGGGATGTTTAG
TAACTTGCAATAGATGGCTCTACCAGCTTGCAATCTGCTCAAGGGCAAAA
CAGCTGCCATCACCGGCGGCACGACAGGAATCGGGCGTGCGATCGCATTG
GCCTTCATCACCCAAGGCTGCAATGTTGCAGTCAACCATCTGGGTCTCCC
CCAAGACGAGGTGCATCGGCACAGTCTGCTTGACGAAGTCAAGTCCATCC
AACAAGGCGGCATTGCGGCTGGCAAGATTCTCGAGATTCCGGGCGATGTG
ACTGCCCCGGAGACCAGCATAAACCTCGTCAAAGAAGCCGTTTCTCAATG
GGGGAAGCTAGATATTTTTGTCGCCAACGCAGGCGTGTTCAAACAAGCTG
AATTTCTCCAGATCGAGTCGTCTCTTCTCGACCACAGCATCGACGTCAAC
ATCAAAGGCTGCTTCTACTCCTGCCAAGCAGCTGCCCGGCAGATGGTCAA
GCAGGGCCATGGCGGCTCCATCATCGGTATCTCCTCCGTCAGCGCGCTGG
TCGGTGGAGGCCTCCAGACCCACTACACGCCCACTAAGGCCGCTGTGCTT
TCCATGATGCAGTCCATGGCCATTTCTCTGGGCAAGGATCGGATCAGATG
CAATGCTCTGATGCCTGGGACCATCGCTACTCAGTTGGCTGATCATGATA
TGAAGAACCCTACCAAGAAGGCTGCGCTCGAGGCGCGCATTCCGTTGGGG
CGGATCGGAAACCCGGACGATATGGCTGGCCCAGCGGTATTTCTGGCTTG
TGAGGAGATGAGTCGATATGTAAATGCCACAGGGCTGTTGGCAGACGGTG
GGATGTTTAGTAACTTGCAATAGATGGCTCTACCAGCTTGCAATCTGCTC
AAGGGCAAAACAGCTGCCATCACCGGCGGCACGACAGGAATCGGGCGTGC
GATCGCATTGGCCTTCATCACCCAAGGCTGCAATGTTGCAGTCAACCATC
TGGGTCTCCCCCAAGACGAGGTGCATCGGCACAGTCTGCTTGACGAAGTC
AAGTCCATCCAACAAGGCGGCATTGCGGCTGGCAAGATTCTCGAGATTCC
GGGCGATGTGACTGCCCCGGAGACCAGCATAAACCTCGTCAAAGAAGCCG
TTTCTCAATGGGGGAAGCTAGATATTTTTGTCGCCAACGCAGGCGTGTTC
AAACAAGCTGAATTTCTCCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:4003869..4004732 - |
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