You are here

Home

CAN33_2805-T1, CAN33_2805-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2805-T1
Unique NameCAN33_2805-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1735467..1737326+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2805-T1 ID=CAN33_2805-T1|Name=CAN33_2805-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1860bp|location=Sequence derived from alignment at NKJJ01000004.1:1735467..1737326+ (Aspergillus niger FDAARGOS_311)
ATGCGTGCGTTATTTGCTATTCATAGGTTGCTCTGCTTGCTTGCAGTCTT
CTCTGAGACCAATGCGCTGGCGTTGCGGTCGCAGGACGTCCTTGCGCCAT
TGTCTCCAAATGCGCAGATTCCGCTGGAGGATTCAACCGATCCCCCATCA
AAGCAGTTTCCCCTTCCTGCTCCAGAGAAGCCTAGTGAACCGATCGGCTC
GATAAGTCGCACTTATGACGATTTGCTGGATGCTCTCAAGGTGATGCAGG
ATGACTACTTCCAGCTTTGGCAAGGCACTTGGCCTACTAGTATCGATTGG
ACTGCTGCCGTGCTTGGGACTCATGTCTCCGCCACCCTCTCCTCACTGAC
TTCTACTGCGGGGGATGTATTGGCAGACATTCTTTCAGCGAGTGCTAGCG
GGGATCACAGACAGTCGGAAGAAATAACCGAACAGTATACGTTGGGATTC
GAGAATCTCATTAACCATTATTTTGACCAAACCTCGGCATTCTACTTTGG
CGAGGATGCCTTTGCCGTAAGAAATCAGGCCTTTGATGATATGTTATGGG
TCGTTTTGGGATGGCTGGAGAACATAAAGTTCCAAGTCTTGCACAGCGAC
CTGCATTACGATGACCCCTTCTCACCCAACGAGACAACGAAGCGCCTCTG
GCATGGAACCCAGTTTCAGTCCCCGGCGGCTCATCGGGCACGTGTGTTCT
ATGGACTTGCGTCCGGGGGCTGGGACGTTTCCTTGTGTAATGGCGGGATG
ATCTGGAGCCCTTACCTGACGCCGTACAAAAATGCCATCACCAATGAGCT
GTACATAGCCGCTAGCATCGGGATGTATCTCTACTTTCCCGGAGACTTTA
TTGATTCACCCTTTATGGGAACCACACTGGACGACGAGAACTGGTCAGAC
GGTTACCCTCACGATCCAACCCATCTGCAGGCCGCCATCGAGGGATATTC
GTGGCTAAATGCCTCCAACATGACGGGTTCCAATGGCCTCTATGGCGATG
GCTTCCATATCAGTGGTTGGAAGAGTGCCGATGATCCTGGCACGCGCAAG
TGTGATGTCCTCAATACTATGGTATATACATACAACCAGGGAGTGATCCT
TAGCGGGCTAAGGGGACTTTGGTTAGCTACTGGTTCGCAGCAATATTTAT
CTGACGGACACCGATTGGTCAATGATGTGCTCTTGGCTACCGGATGGCCT
AACAAAGGCAGTCAGCAGTGGGAAGGGCTTGGCCGCGGAGGTGTGTTGGA
GGATGCGTGCGACTCTTCCGGGAGCTGCTCCCAAAATGGACAAACCTTCA
AAGGCATCTTCTTTCATCATTTGGCCGAGTTCTGCCGAGACATCCGGCCG
CAGGAATTGCGTTTCCTGGCCAGTGCCAACCGCACAGGGGACGGGGAAGA
CGGCTGGCAGTACGTATACGAGTGGCACCAAGCACGATGCCGGACATACC
GCCCCTGGCTCGAGCACAACGCCAACGCAGCTCTGTTGACCAAGAATGGC
GACGGCAAGATCGGGGAGTGGTGGGGAAACACCACCGCCACCGACGTGAG
TCCTCTGCCGCAGGGGGCGATCGACTATCAAAATTATGGGGCGCAGGCTG
AGGGCTCGGAGGCGTTGACGGGCCTTCTCCGCAGCCGTGGCTCTAAGGGT
CCCAGCAACGAGGAGACGCTGGGACTTGATTCCACACGACAGCTGCAGGG
CTGGGGAGCTGCACCCGAGCGGTCGGGTTTCACAGAGCGTGACTATGTGC
CAAACGACTACAACGATCGTGGTCGCGGACGCACTGTTGAGACACAGTCA
GGAGGTGTCGCGGTGCTGCGGGCATTGTACCAGTGGAAGACGACTTCGTC
TCTTGCATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:1735467..1737326+

>CAN33_2805-T1 ID=CAN33_2805-T1|Name=CAN33_2805-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1860bp|location=Sequence derived from alignment at NKJJ01000004.1:1735467..1737326+ (Aspergillus niger FDAARGOS_311)
ATGCGTGCGTTATTTGCTATTCATAGGTTGCTCTGCTTGCTTGCAGTCTT
CTCTGAGACCAATGCGCTGGCGTTGCGGTCGCAGGACGTCCTTGCGCCAT
TGTCTCCAAATGCGCAGATTCCGCTGGAGGATTCAACCGATCCCCCATCA
AAGCAGTTTCCCCTTCCTGCTCCAGAGAAGCCTAGTGAACCGATCGGCTC
GATAAGTCGCACTTATGACGATTTGCTGGATGCTCTCAAGGTGATGCAGG
ATGACTACTTCCAGCTTTGGCAAGGCACTTGGCCTACTAGTATCGATTGG
ACTGCTGCCGTGCTTGGGACTCATGTCTCCGCCACCCTCTCCTCACTGAC
TTCTACTGCGGGGGATGTATTGGCAGACATTCTTTCAGCGAGTGCTAGCG
GGGATCACAGACAGTCGGAAGAAATAACCGAACAGTATACGTTGGGATTC
GAGAATCTCATTAACCATTATTTTGACCAAACCTCGGCATTCTACTTTGG
CGAGGATGCCTTTGCCGTAAGAAATCAGGCCTTTGATGATATGTTATGGG
TCGTTTTGGGATGGCTGGAGAACATAAAGTTCCAAGTCTTGCACAGCGAC
CTGCATTACGATGACCCCTTCTCACCCAACGAGACAACGAAGCGCCTCTG
GCATGGAACCCAGTTTCAGTCCCCGGCGGCTCATCGGGCACGTGTGTTCT
ATGGACTTGCGTCCGGGGGCTGGGACGTTTCCTTGTGTAATGGCGGGATG
ATCTGGAGCCCTTACCTGACGCCGTACAAAAATGCCATCACCAATGAGCT
GTACATAGCCGCTAGCATCGGGATGTATCTCTACTTTCCCGGAGACTTTA
TTGATTCACCCTTTATGGGAACCACACTGGACGACGAGAACTGGTCAGAC
GGTTACCCTCACGATCCAACCCATCTGCAGGCCGCCATCGAGGGATATTC
GTGGCTAAATGCCTCCAACATGACGGGTTCCAATGGCCTCTATGGCGATG
GCTTCCATATCAGTGGTTGGAAGAGTGCCGATGATCCTGGCACGCGCAAG
TGTGATGTCCTCAATACTATGGTATATACATACAACCAGGGAGTGATCCT
TAGCGGGCTAAGGGGACTTTGGTTAGCTACTGGTTCGCAGCAATATTTAT
CTGACGGACACCGATTGGTCAATGATGTGCTCTTGGCTACCGGATGGCCT
AACAAAGGCAGTCAGCAGTGGGAAGGGCTTGGCCGCGGAGGTGTGTTGGA
GGATGCGTGCGACTCTTCCGGGAGCTGCTCCCAAAATGGACAAACCTTCA
AAGGCATCTTCTTTCATCATTTGGCCGAGTTCTGCCGAGACATCCGGCCG
CAGGAATTGCGTTTCCTGGCCAGTGCCAACCGCACAGGGGACGGGGAAGA
CGGCTGGCAGTACGTATACGAGTGGCACCAAGCACGATGCCGGACATACC
GCCCCTGGCTCGAGCACAACGCCAACGCAGCTCTGTTGACCAAGAATGGC
GACGGCAAGATCGGGGAGTGGTGGGGAAACACCACCGCCACCGACGTGAG
TCCTCTGCCGCAGGGGGCGATCGACTATCAAAATTATGGGGCGCAGGCTG
AGGGCTCGGAGGCGTTGACGGGCCTTCTCCGCAGCCGTGGCTCTAAGGGT
CCCAGCAACGAGGAGACGCTGGGACTTGATTCCACACGACAGCTGCAGGG
CTGGGGAGCTGCACCCGAGCGGTCGGGTTTCACAGAGCGTGACTATGTGC
CAAACGACTACAACGATCGTGGTCGCGGACGCACTGTTGAGACACAGTCA
GGAGGTGTCGCGGTGCTGCGGGCATTGTACCAGTGGAAGACGACTTCGTC
TCTTGCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2805CAN33_2805Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2805-T1.exon1CAN33_2805-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2805-T1.cdsCAN33_2805-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2805-T1CAN33_2805-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-22)
NoteCAZy:GH76
DBxrefInterPro:IPR005198
ProductGlycosyl hydrolase family 76 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1735467..1737326 +
Powered by Drupal