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CAN33_28060-T1, CAN33_28060-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28060-T1
Unique NameCAN33_28060-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:4021406..4022440+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28060-T1 ID=CAN33_28060-T1|Name=CAN33_28060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1035bp|location=Sequence derived from alignment at NKJJ01000002.1:4021406..4022440+ (Aspergillus niger FDAARGOS_311)
ATGTCCGGAATATGGGTTGTCGTAGGTGCATCCAGAGGCATCGGCCTTGA
GTTCGTTCGGCAGCTAGCAAACTCTGGACAACGGGTTATCGCCGGAGTGC
GCAGCCTATCAAGTGCTGAACAGCTCTTCGAACTAGTTTCCCGGAATACT
CGGGACGGTGCTTCTCTGATCACCGTAGAGGAATGTGACGTTACGAAGGC
TGAAAGTATCGACGTAAGTTAAGCGCCGTAAAGCATCTAATGGTGATCAG
GTAAGAGCTAACATATAGGACTAGGACTTTTCTCGCAGAGTCCAAAGAGC
CGTGCGAGATGGAGGGCTACGATTAACGAATGTTATTTTGAATGCCGGCA
TCAATCAATATCCGAATCGTGCTACGGAGATGTACGCCTGCCATCAAAGT
ACACCGTTATAGCTTATACTCACACACATTGTTGTATCTTTTAGTTCCTT
CGAGTCATTTGCCCACCACCTGCAAACCAACACAATTGGCCCCATAATTG
TCGCTCAAAAAATGCTTACCATCGACCCGACCACACCGTTAGAGAAGCTC
ATATTCATTTCCTCTGACTCCGGCTCAGCGAGCCAATTTCGGGGCCACGA
AGACGGATTTGCCGTATATGCAGCTACTAAAGCAGCCCTGAATCAGTCGT
TGAGGCATATGGCGGCGGAAATTTCCCGAAAGGGTGGCAGGACGTGCGTG
TTGGCGCTGCATCCGGGCGAGGTGGAAACGTGAGTACCAGTATATCGTCT
AGTTATTTTTAGTCTCTCTGGTAGTTGGCTGCGTTTGTTCGAAGTGAGGC
TTGTTGCGCTAATCTGTTGCGGCAGTGATATGGCAAATGTGCAGTTGGGA
TGGGTAGTTGAGGGCGTAATTCAGCCAGACGAGAGTGTAGAGGGGATGCT
GAGGGTCATTAAAGAGAAAGGTGAAGGGGACCATGGGACATTCTGGTGTT
GGAATGGCAGGGTGAGTTTAATATTAAAGTCACTCTTCGGTTGGGCCAGG
ACCTTTCTAACAATAACCAGAGTCATCCATGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:4021406..4022440+

>CAN33_28060-T1 ID=CAN33_28060-T1|Name=CAN33_28060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3780bp|location=Sequence derived from alignment at NKJJ01000002.1:4021406..4022440+ (Aspergillus niger FDAARGOS_311)
ATGTCCGGAATATGGGTTGTCGTAGGTGCATCCAGAGGCATCGGCCTTGA
GTTCGTTCGGCAGCTAGCAAACTCTGGACAACGGGTTATCGCCGGAGTGC
GCAGCCTATCAAGTGCTGAACAGCTCTTCGAACTAGTTTCCCGGAATACT
CGGGACGGTGCTTCTCTGATCACCGTAGAGGAATGTGACGTTACGAAGGC
TGAAAGTATCGACGACTTTTCTCGCAGAGTCCAAAGAGCCGTGCGAGATG
GAGGGCTACGATTAACGAATGTTATTTTGAATGCCGGCATCAATCAATAT
CCGAATCGTGCTACGGAGATTTCCTTCGAGTCATTTGCCCACCACCTGCA
AACCAACACAATTGGCCCCATAATTGTCGCTCAAAAAATGCTTACCATCG
ACCCGACCACACCGTTAGAGAAGCTCATATTCATTTCCTCTGACTCCGGC
TCAGCGAGCCAATTTCGGGGCCACGAAGACGGATTTGCCGTATATGCAGC
TACTAAAGCAGCCCTGAATCAGTCGTTGAGGCATATGGCGGCGGAAATTT
CCCGAAAGGGTGGCAGGACGTGCGTGTTGGCGCTGCATCCGGGCGAGGTG
GAAACTGATATGGCAAATGTGCAGTTGGGATGGGTAGTTGAGGGCGTAAT
TCAGCCAGACGAGAGTGTAGAGGGGATGCTGAGGGTCATTAAAGAGAAAG
GTGAAGGGGACCATGGGACATTCTGGTGTTGGAATGGCAGGAGTCATCCA
TGGTGAATGTCCGGAATATGGGTTGTCGTAGGTGCATCCAGAGGCATCGG
CCTTGAGTTCGTTCGGCAGCTAGCAAACTCTGGACAACGGGTTATCGCCG
GAGTGCGCAGCCTATCAAGTGCTGAACAGCTCTTCGAACTAGTTTCCCGG
AATACTCGGGACGGTGCTTCTCTGATCACCGTAGAGGAATGTGACGTTAC
GAAGGCTGAAAGTATCGACGACTTTTCTCGCAGAGTCCAAAGAGCCGTGC
GAGATGGAGGGCTACGATTAACGAATGTTATTTTGAATGCCGGCATCAAT
CAATATCCGAATCGTGCTACGGAGATTTCCTTCGAGTCATTTGCCCACCA
CCTGCAAACCAACACAATTGGCCCCATAATTGTCGCTCAAAAAATGCTTA
CCATCGACCCGACCACACCGTTAGAGAAGCTCATATTCATTTCCTCTGAC
TCCGGCTCAGCGAGCCAATTTCGGGGCCACGAAGACGGATTTGCCGTATA
TGCAGCTACTAAAGCAGCCCTGAATCAGTCGTTGAGGCATATGGCGGCGG
AAATTTCCCGAAAGGGTGGCAGGACGTGCGTGTTGGCGCTGCATCCGGGC
GAGGTGGAAACTGATATGGCAAATGTGCAGTTGGGATGGGTAGTTGAGGG
CGTAATTCAGCCAGACGAGAGTGTAGAGGGGATGCTGAGGGTCATTAAAG
AGAAAGGTGAAGGGGACCATGGGACATTCTGGTGTTGGAATGGCAGGAGT
CATCCATGGTGAATGTCCGGAATATGGGTTGTCGTAGGTGCATCCAGAGG
CATCGGCCTTGAGTTCGTTCGGCAGCTAGCAAACTCTGGACAACGGGTTA
TCGCCGGAGTGCGCAGCCTATCAAGTGCTGAACAGCTCTTCGAACTAGTT
TCCCGGAATACTCGGGACGGTGCTTCTCTGATCACCGTAGAGGAATGTGA
CGTTACGAAGGCTGAAAGTATCGACGACTTTTCTCGCAGAGTCCAAAGAG
CCGTGCGAGATGGAGGGCTACGATTAACGAATGTTATTTTGAATGCCGGC
ATCAATCAATATCCGAATCGTGCTACGGAGATTTCCTTCGAGTCATTTGC
CCACCACCTGCAAACCAACACAATTGGCCCCATAATTGTCGCTCAAAAAA
TGCTTACCATCGACCCGACCACACCGTTAGAGAAGCTCATATTCATTTCC
TCTGACTCCGGCTCAGCGAGCCAATTTCGGGGCCACGAAGACGGATTTGC
CGTATATGCAGCTACTAAAGCAGCCCTGAATCAGTCGTTGAGGCATATGG
CGGCGGAAATTTCCCGAAAGGGTGGCAGGACGTGCGTGTTGGCGCTGCAT
CCGGGCGAGGTGGAAACTGATATGGCAAATGTGCAGTTGGGATGGGTAGT
TGAGGGCGTAATTCAGCCAGACGAGAGTGTAGAGGGGATGCTGAGGGTCA
TTAAAGAGAAAGGTGAAGGGGACCATGGGACATTCTGGTGTTGGAATGGC
AGGAGTCATCCATGGTGAATGTCCGGAATATGGGTTGTCGTAGGTGCATC
CAGAGGCATCGGCCTTGAGTTCGTTCGGCAGCTAGCAAACTCTGGACAAC
GGGTTATCGCCGGAGTGCGCAGCCTATCAAGTGCTGAACAGCTCTTCGAA
CTAGTTTCCCGGAATACTCGGGACGGTGCTTCTCTGATCACCGTAGAGGA
ATGTGACGTTACGAAGGCTGAAAGTATCGACGACTTTTCTCGCAGAGTCC
AAAGAGCCGTGCGAGATGGAGGGCTACGATTAACGAATGTTATTTTGAAT
GCCGGCATCAATCAATATCCGAATCGTGCTACGGAGATTTCCTTCGAGTC
ATTTGCCCACCACCTGCAAACCAACACAATTGGCCCCATAATTGTCGCTC
AAAAAATGCTTACCATCGACCCGACCACACCGTTAGAGAAGCTCATATTC
ATTTCCTCTGACTCCGGCTCAGCGAGCCAATTTCGGGGCCACGAAGACGG
ATTTGCCGTATATGCAGCTACTAAAGCAGCCCTGAATCAGTCGTTGAGGC
ATATGGCGGCGGAAATTTCCCGAAAGGGTGGCAGGACGTGCGTGTTGGCG
CTGCATCCGGGCGAGGTGGAAACTGATATGGCAAATGTGCAGTTGGGATG
GGTAGTTGAGGGCGTAATTCAGCCAGACGAGAGTGTAGAGGGGATGCTGA
GGGTCATTAAAGAGAAAGGTGAAGGGGACCATGGGACATTCTGGTGTTGG
AATGGCAGGAGTCATCCATGGTGAATGTCCGGAATATGGGTTGTCGTAGG
TGCATCCAGAGGCATCGGCCTTGAGTTCGTTCGGCAGCTAGCAAACTCTG
GACAACGGGTTATCGCCGGAGTGCGCAGCCTATCAAGTGCTGAACAGCTC
TTCGAACTAGTTTCCCGGAATACTCGGGACGGTGCTTCTCTGATCACCGT
AGAGGAATGTGACGTTACGAAGGCTGAAAGTATCGACGACTTTTCTCGCA
GAGTCCAAAGAGCCGTGCGAGATGGAGGGCTACGATTAACGAATGTTATT
TTGAATGCCGGCATCAATCAATATCCGAATCGTGCTACGGAGATTTCCTT
CGAGTCATTTGCCCACCACCTGCAAACCAACACAATTGGCCCCATAATTG
TCGCTCAAAAAATGCTTACCATCGACCCGACCACACCGTTAGAGAAGCTC
ATATTCATTTCCTCTGACTCCGGCTCAGCGAGCCAATTTCGGGGCCACGA
AGACGGATTTGCCGTATATGCAGCTACTAAAGCAGCCCTGAATCAGTCGT
TGAGGCATATGGCGGCGGAAATTTCCCGAAAGGGTGGCAGGACGTGCGTG
TTGGCGCTGCATCCGGGCGAGGTGGAAACTGATATGGCAAATGTGCAGTT
GGGATGGGTAGTTGAGGGCGTAATTCAGCCAGACGAGAGTGTAGAGGGGA
TGCTGAGGGTCATTAAAGAGAAAGGTGAAGGGGACCATGGGACATTCTGG
TGTTGGAATGGCAGGAGTCATCCATGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28060CAN33_28060Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28060-T1CAN33_28060-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28060-T1.exon1CAN33_28060-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_28060-T1.exon2CAN33_28060-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28060-T1.exon3CAN33_28060-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_28060-T1.exon4CAN33_28060-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_28060-T1.exon5CAN33_28060-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28060-T1.cdsCAN33_28060-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:4021406..4022440 +
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