|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:4075503..4077606- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_28185-T1 ID=CAN33_28185-T1|Name=CAN33_28185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2104bp|location=Sequence derived from alignment at NKJJ01000002.1:4075503..4077606- (Aspergillus niger FDAARGOS_311)
ATGGCCGCATATCCTCGTCCTGACTTCCAGCGCCCAGCCCTCAATTGGCT
TTCCCTTGACGGTTCCTGGGACTTTATCTTCGACGATGCTGATACAGGCC
TAAGCCAACGGTGGCATCAACAGGGTCTCCCTGCCCAAGAGGCCGCACAA
TCGAAGCGTCAGATCAATGTCCCGTACGCATTCCAAACCCCGGCGTCAGG
TATTGGTCTATATGAGGTTCATGAAGTGCTCTGGTATGAACGAACGGTCC
CGGACATACGCACCACAGATGAACAGACGAAAGGGAACCGACTAATCCTT
CGTTTCGGGGCGGTGGACTACGAATGTACTGTCTGGGTCGATGGACAATT
GGTTGGCGCTCACCGAGGAGGCCATGTACCTTTTGAGATCGATGTCTCGG
ACGCATTTGGTGCCCAGGGAGGCTCGGCCACCCGGCGCCTCACCATTCGC
GTTCGCGACTCTGCAACCGATCTCGGTCAACTGCGAGGGAAGCAATACTG
GGGGCCCGTTCCACAGGAGATCTTCTATACCCCTACTAGTGGCATCTGGC
TGTCTGTCTGGTTGGAGAGTGTGCCCCGGACGCGGCTGGGAAGCAGCAGT
GACGGGACGGTCCTACGGTCGGATGACATTCAAGGTGGCCTCTTACATGC
ACGACTCACGGTACTAGGTCGCCCCGTGGCCGCCGGTTGTAGCGTTGAAA
TCGAGGCTAGTCTTGCAGGAAACTTGGTCAGTCATCGCAGAAAAGATCTG
CCCCGTGACAAGGACTGGGTAGACCTTGACATAGACATGCGCGTTCCACA
AGTCGATTCATTGAAGCAACAGAGCCCCTTCAACATTGATGGTTGTTGGC
GAGGTAATGTAGCTCTCTGGGCACCGGAACACCCAATCCTGTATGACCTG
GTTCTGCGTCTCTACGACTCCTCGGGCAATCAAGTGGATACTATCGAGAC
GACGACGGGCATGCGGAGCGTTTCATGGACTTACGGTGATGGAACCTTCC
GACTGAATGGAAAGCCGTGCTTCCAGACACTCGTGCTGGACCAGGGATAC
TGGCCAGAGACAGGCCTGACCCCACCATCACAAGATGCTCTCCGAGCGGA
CATTGAAATGGCGAAGAATATGGGTATCAATGGCTGCCGCAAGCACCAGA
AGGTCGAAGACCCCGTATTTCACTACTGGGCCGATCGGCTTGGGTTCCTG
GTCTGGGGAGAGATAGCCAATGCGTACGAGTTCAGCGACGAATATATCTC
GCGCTTCAACAGCGAGTGGGTGGAGGCCGTGCGAAGGGATATCAATCACC
CGTGCATAGTGGCATGGACCCCGTTCAACGAGAGCTGGGGCTATCCCTCC
CTGAAGGACAATATTGACCAGCGCAACCATATCCGGTCAGTGTACTACCT
CACCAAGTAAGTCAATGTTTGTTCTATCCTTAAAAATGTAACATCGCTCA
TAAGTTTAGAACGCTGGATCCAACTCGGCCGATCAACGATAATTGCGGCT
GGGAACATGTGGCAACCGATCTGACGACTTGCCACGACTACTCCGACTTC
CCTGCGCTGACAGAAACTTGTGCGGACTTCAAGACTGGTATCCTAGGCAA
GAAGTCCAACCGAGACATGTTTGTACCTCCTATCCCGGCCACTCCATCCA
CTCCTTCGGACGCTGGTGCACAGCATGCCTCTGGGGCTCCCGTCATCTGT
TCAGAATTCGGTGGAGTCAATATCATCCCCGCAAAGGGGACCGCAGCCGG
GGAGCGGGACTGGGGATACACCACCGCGACTGATCCGGAAGACCTGCTGA
GTCGCCTGGAAAAGCTTGTCATGGCAGTGGTGAAAGGGGGCCATTCGTGT
GGATTGGTCTATACCCAACTGTATGTCCCCTTCCTTACTGTTTTGCGAGA
TATAGGTTGTCTGCGACCGTGGTGGCTATCAGCAGCCGTGTCCATCATTA
CCCAATGGCTAATCTTCTTCATAGTTGTGACATTGAGCAAGAGGTAAATG
GTCTCTATTCGTACGATCGAAAAGAGAAGGTGCCAGCTTCCCGGGTCAAG
GCCATTATGGATTCCGCTCACCGCTACTACCACGAGCATGTGGCTCCTAA
ATAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:4075503..4077606- >CAN33_28185-T1 ID=CAN33_28185-T1|Name=CAN33_28185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5841bp|location=Sequence derived from alignment at NKJJ01000002.1:4075503..4077606- (Aspergillus niger FDAARGOS_311)
TTGTGACATTGAGCAAGAGGTAAATGGTCTCTATTCGTACGATCGAAAAG
AGAAGGTGCCAGCTTCCCGGGTCAAGGCCATTATGGATTCCGCTCACCGC
TACTACCACGAGCATGTGGCTCCTAAATAGAACGCTGGATCCAACTCGGC
CGATCAACGATAATTGCGGCTGGGAACATGTGGCAACCGATCTGACGACT
TGCCACGACTACTCCGACTTCCCTGCGCTGACAGAAACTTGTGCGGACTT
CAAGACTGGTATCCTAGGCAAGAAGTCCAACCGAGACATGTTTGTACCTC
CTATCCCGGCCACTCCATCCACTCCTTCGGACGCTGGTGCACAGCATGCC
TCTGGGGCTCCCGTCATCTGTTCAGAATTCGGTGGAGTCAATATCATCCC
CGCAAAGGGGACCGCAGCCGGGGAGCGGGACTGGGGATACACCACCGCGA
CTGATCCGGAAGACCTGCTGAGTCGCCTGGAAAAGCTTGTCATGGCAGTG
GTGAAAGGGGGCCATTCGTGTGGATTGGTCTATACCCAACTATGGCCGCA
TATCCTCGTCCTGACTTCCAGCGCCCAGCCCTCAATTGGCTTTCCCTTGA
CGGTTCCTGGGACTTTATCTTCGACGATGCTGATACAGGCCTAAGCCAAC
GGTGGCATCAACAGGGTCTCCCTGCCCAAGAGGCCGCACAATCGAAGCGT
CAGATCAATGTCCCGTACGCATTCCAAACCCCGGCGTCAGGTATTGGTCT
ATATGAGGTTCATGAAGTGCTCTGGTATGAACGAACGGTCCCGGACATAC
GCACCACAGATGAACAGACGAAAGGGAACCGACTAATCCTTCGTTTCGGG
GCGGTGGACTACGAATGTACTGTCTGGGTCGATGGACAATTGGTTGGCGC
TCACCGAGGAGGCCATGTACCTTTTGAGATCGATGTCTCGGACGCATTTG
GTGCCCAGGGAGGCTCGGCCACCCGGCGCCTCACCATTCGCGTTCGCGAC
TCTGCAACCGATCTCGGTCAACTGCGAGGGAAGCAATACTGGGGGCCCGT
TCCACAGGAGATCTTCTATACCCCTACTAGTGGCATCTGGCTGTCTGTCT
GGTTGGAGAGTGTGCCCCGGACGCGGCTGGGAAGCAGCAGTGACGGGACG
GTCCTACGGTCGGATGACATTCAAGGTGGCCTCTTACATGCACGACTCAC
GGTACTAGGTCGCCCCGTGGCCGCCGGTTGTAGCGTTGAAATCGAGGCTA
GTCTTGCAGGAAACTTGGTCAGTCATCGCAGAAAAGATCTGCCCCGTGAC
AAGGACTGGGTAGACCTTGACATAGACATGCGCGTTCCACAAGTCGATTC
ATTGAAGCAACAGAGCCCCTTCAACATTGATGGTTGTTGGCGAGGTAATG
TAGCTCTCTGGGCACCGGAACACCCAATCCTGTATGACCTGGTTCTGCGT
CTCTACGACTCCTCGGGCAATCAAGTGGATACTATCGAGACGACGACGGG
CATGCGGAGCGTTTCATGGACTTACGGTGATGGAACCTTCCGACTGAATG
GAAAGCCGTGCTTCCAGACACTCGTGCTGGACCAGGGATACTGGCCAGAG
ACAGGCCTGACCCCACCATCACAAGATGCTCTCCGAGCGGACATTGAAAT
GGCGAAGAATATGGGTATCAATGGCTGCCGCAAGCACCAGAAGGTCGAAG
ACCCCGTATTTCACTACTGGGCCGATCGGCTTGGGTTCCTGGTCTGGGGA
GAGATAGCCAATGCGTACGAGTTCAGCGACGAATATATCTCGCGCTTCAA
CAGCGAGTGGGTGGAGGCCGTGCGAAGGGATATCAATCACCCGTGCATAG
TGGCATGGACCCCGTTCAACGAGAGCTGGGGCTATCCCTCCCTGAAGGAC
AATATTGACCAGCGCAACCATATCCGGTCAGTGTACTACCTCACCAATTG
TGACATTGAGCAAGAGGTAAATGGTCTCTATTCGTACGATCGAAAAGAGA
AGGTGCCAGCTTCCCGGGTCAAGGCCATTATGGATTCCGCTCACCGCTAC
TACCACGAGCATGTGGCTCCTAAATAGAACGCTGGATCCAACTCGGCCGA
TCAACGATAATTGCGGCTGGGAACATGTGGCAACCGATCTGACGACTTGC
CACGACTACTCCGACTTCCCTGCGCTGACAGAAACTTGTGCGGACTTCAA
GACTGGTATCCTAGGCAAGAAGTCCAACCGAGACATGTTTGTACCTCCTA
TCCCGGCCACTCCATCCACTCCTTCGGACGCTGGTGCACAGCATGCCTCT
GGGGCTCCCGTCATCTGTTCAGAATTCGGTGGAGTCAATATCATCCCCGC
AAAGGGGACCGCAGCCGGGGAGCGGGACTGGGGATACACCACCGCGACTG
ATCCGGAAGACCTGCTGAGTCGCCTGGAAAAGCTTGTCATGGCAGTGGTG
AAAGGGGGCCATTCGTGTGGATTGGTCTATACCCAACTATGGCCGCATAT
CCTCGTCCTGACTTCCAGCGCCCAGCCCTCAATTGGCTTTCCCTTGACGG
TTCCTGGGACTTTATCTTCGACGATGCTGATACAGGCCTAAGCCAACGGT
GGCATCAACAGGGTCTCCCTGCCCAAGAGGCCGCACAATCGAAGCGTCAG
ATCAATGTCCCGTACGCATTCCAAACCCCGGCGTCAGGTATTGGTCTATA
TGAGGTTCATGAAGTGCTCTGGTATGAACGAACGGTCCCGGACATACGCA
CCACAGATGAACAGACGAAAGGGAACCGACTAATCCTTCGTTTCGGGGCG
GTGGACTACGAATGTACTGTCTGGGTCGATGGACAATTGGTTGGCGCTCA
CCGAGGAGGCCATGTACCTTTTGAGATCGATGTCTCGGACGCATTTGGTG
CCCAGGGAGGCTCGGCCACCCGGCGCCTCACCATTCGCGTTCGCGACTCT
GCAACCGATCTCGGTCAACTGCGAGGGAAGCAATACTGGGGGCCCGTTCC
ACAGGAGATCTTCTATACCCCTACTAGTGGCATCTGGCTGTCTGTCTGGT
TGGAGAGTGTGCCCCGGACGCGGCTGGGAAGCAGCAGTGACGGGACGGTC
CTACGGTCGGATGACATTCAAGGTGGCCTCTTACATGCACGACTCACGGT
ACTAGGTCGCCCCGTGGCCGCCGGTTGTAGCGTTGAAATCGAGGCTAGTC
TTGCAGGAAACTTGGTCAGTCATCGCAGAAAAGATCTGCCCCGTGACAAG
GACTGGGTAGACCTTGACATAGACATGCGCGTTCCACAAGTCGATTCATT
GAAGCAACAGAGCCCCTTCAACATTGATGGTTGTTGGCGAGGTAATGTAG
CTCTCTGGGCACCGGAACACCCAATCCTGTATGACCTGGTTCTGCGTCTC
TACGACTCCTCGGGCAATCAAGTGGATACTATCGAGACGACGACGGGCAT
GCGGAGCGTTTCATGGACTTACGGTGATGGAACCTTCCGACTGAATGGAA
AGCCGTGCTTCCAGACACTCGTGCTGGACCAGGGATACTGGCCAGAGACA
GGCCTGACCCCACCATCACAAGATGCTCTCCGAGCGGACATTGAAATGGC
GAAGAATATGGGTATCAATGGCTGCCGCAAGCACCAGAAGGTCGAAGACC
CCGTATTTCACTACTGGGCCGATCGGCTTGGGTTCCTGGTCTGGGGAGAG
ATAGCCAATGCGTACGAGTTCAGCGACGAATATATCTCGCGCTTCAACAG
CGAGTGGGTGGAGGCCGTGCGAAGGGATATCAATCACCCGTGCATAGTGG
CATGGACCCCGTTCAACGAGAGCTGGGGCTATCCCTCCCTGAAGGACAAT
ATTGACCAGCGCAACCATATCCGGTCAGTGTACTACCTCACCAATTGTGA
CATTGAGCAAGAGGTAAATGGTCTCTATTCGTACGATCGAAAAGAGAAGG
TGCCAGCTTCCCGGGTCAAGGCCATTATGGATTCCGCTCACCGCTACTAC
CACGAGCATGTGGCTCCTAAATAGAACGCTGGATCCAACTCGGCCGATCA
ACGATAATTGCGGCTGGGAACATGTGGCAACCGATCTGACGACTTGCCAC
GACTACTCCGACTTCCCTGCGCTGACAGAAACTTGTGCGGACTTCAAGAC
TGGTATCCTAGGCAAGAAGTCCAACCGAGACATGTTTGTACCTCCTATCC
CGGCCACTCCATCCACTCCTTCGGACGCTGGTGCACAGCATGCCTCTGGG
GCTCCCGTCATCTGTTCAGAATTCGGTGGAGTCAATATCATCCCCGCAAA
GGGGACCGCAGCCGGGGAGCGGGACTGGGGATACACCACCGCGACTGATC
CGGAAGACCTGCTGAGTCGCCTGGAAAAGCTTGTCATGGCAGTGGTGAAA
GGGGGCCATTCGTGTGGATTGGTCTATACCCAACTATGGCCGCATATCCT
CGTCCTGACTTCCAGCGCCCAGCCCTCAATTGGCTTTCCCTTGACGGTTC
CTGGGACTTTATCTTCGACGATGCTGATACAGGCCTAAGCCAACGGTGGC
ATCAACAGGGTCTCCCTGCCCAAGAGGCCGCACAATCGAAGCGTCAGATC
AATGTCCCGTACGCATTCCAAACCCCGGCGTCAGGTATTGGTCTATATGA
GGTTCATGAAGTGCTCTGGTATGAACGAACGGTCCCGGACATACGCACCA
CAGATGAACAGACGAAAGGGAACCGACTAATCCTTCGTTTCGGGGCGGTG
GACTACGAATGTACTGTCTGGGTCGATGGACAATTGGTTGGCGCTCACCG
AGGAGGCCATGTACCTTTTGAGATCGATGTCTCGGACGCATTTGGTGCCC
AGGGAGGCTCGGCCACCCGGCGCCTCACCATTCGCGTTCGCGACTCTGCA
ACCGATCTCGGTCAACTGCGAGGGAAGCAATACTGGGGGCCCGTTCCACA
GGAGATCTTCTATACCCCTACTAGTGGCATCTGGCTGTCTGTCTGGTTGG
AGAGTGTGCCCCGGACGCGGCTGGGAAGCAGCAGTGACGGGACGGTCCTA
CGGTCGGATGACATTCAAGGTGGCCTCTTACATGCACGACTCACGGTACT
AGGTCGCCCCGTGGCCGCCGGTTGTAGCGTTGAAATCGAGGCTAGTCTTG
CAGGAAACTTGGTCAGTCATCGCAGAAAAGATCTGCCCCGTGACAAGGAC
TGGGTAGACCTTGACATAGACATGCGCGTTCCACAAGTCGATTCATTGAA
GCAACAGAGCCCCTTCAACATTGATGGTTGTTGGCGAGGTAATGTAGCTC
TCTGGGCACCGGAACACCCAATCCTGTATGACCTGGTTCTGCGTCTCTAC
GACTCCTCGGGCAATCAAGTGGATACTATCGAGACGACGACGGGCATGCG
GAGCGTTTCATGGACTTACGGTGATGGAACCTTCCGACTGAATGGAAAGC
CGTGCTTCCAGACACTCGTGCTGGACCAGGGATACTGGCCAGAGACAGGC
CTGACCCCACCATCACAAGATGCTCTCCGAGCGGACATTGAAATGGCGAA
GAATATGGGTATCAATGGCTGCCGCAAGCACCAGAAGGTCGAAGACCCCG
TATTTCACTACTGGGCCGATCGGCTTGGGTTCCTGGTCTGGGGAGAGATA
GCCAATGCGTACGAGTTCAGCGACGAATATATCTCGCGCTTCAACAGCGA
GTGGGTGGAGGCCGTGCGAAGGGATATCAATCACCCGTGCATAGTGGCAT
GGACCCCGTTCAACGAGAGCTGGGGCTATCCCTCCCTGAAGGACAATATT
GACCAGCGCAACCATATCCGGTCAGTGTACTACCTCACCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | CAZy:GH2 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR036156 |
| DBxref | InterPro:IPR008979 |
| DBxref | InterPro:IPR006104 |
| DBxref | InterPro:IPR006102 |
| DBxref | InterPro:IPR006103 |
| DBxref | InterPro:IPR013783 |
| DBxref | PFAM:PF02837 |
| Product | Glycosyl hydrolases family 2 sugar binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:4075503..4077606 - |
|
