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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:4088519..4090031- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_28205-T1 ID=CAN33_28205-T1|Name=CAN33_28205-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1513bp|location=Sequence derived from alignment at NKJJ01000002.1:4088519..4090031- (Aspergillus niger FDAARGOS_311)
ATGCCTCACTCAGAAGCCCCTCAGGAGCAAACGATTGCCAGTGCCGACGT
GACGAGCGGCGCTCAGGGCGTACGTATACCGTATACATTAGTTTCAGGGA
ATATGCTAATAACTAGACCAGCAACAAACCCAGATTCGGGTCCTAGTCGC
CTGCCCTCGTTCGGGCTCCACACTCTTCATGCGTATCTTTCGCGAACTCC
CTCGTTGTGCGGTTACGAGTCGCTTGATTCTGCAAGGCAACTACCACAAA
TTCAGCGACCAAACTCTAGCTCGAATCAAGCCCGACTATACTATCTTCTC
TCATCCAGAAGCCCATCCCGTCTACCATCAAGCGGTGTCAGAAGGCTTCA
CCACTCTGGTCACGAAAGAGGAATTGGGTCACGAGTTCTTCAAGGGTGAA
TGCGACTTCAACATCCTGCCCGATCGAGCAGCCTACGAGATGACGCGGCC
CGCGTTTCTTGTCCGGGACCCAGTGCGTGTCTTTGATAGCTGGAAAAATA
TGGGCTGGGGCGACCTATACAGCTTTTTCATTTGCTATCGTTCACTTTTC
AGAATGCTCAATGCTAGCCCAGCACCTCAAGTTGTCCTGTATGAACAATT
GGTGGCCGACCCCAGAGACACAGTAACCGCACTGGCACAGTACTGGGGCA
TCGCATACGATGAAGGCTGTTTGGAATTTAGGCAGCCGTTTGGGGATTAC
CTATTCAACGGTGACCGAGAACAATCGATCTATCAGGGTGCCGTTCCTGC
CGGCCTCTTCAACCGCGTCAAGTCCCACACCCATGTTGAAGACTTCCAGG
GCCATGGTCTGCTATCCGCACTGGAAATTGAACATATCGAAGCCGAAGTA
GGCGGCCTGTACCTTGAGGCTTATGGCTCACAGCTAGACCCCATTTCAAG
TCTTCTCTTCAAAAAGACGTGGTTTGGTTTCGATCTAGATGACACACTGC
ACGAGTTTCGCAAGGCGTCTGCCCATGCATCCCAATCAGTCTTCGCGGCA
ATTCGAGTCAACCATCCCGAGAGCAAAGACACAATTGACGATCTCCAGGC
GACCTATCGTGACATCCTTCGGTCAAATTCTTCAAATGCGTTCACAGATG
GAAAGTCATCCGAAGATTACCGCAGTGATAGATTTCAACGTTTGCTCGAA
GCCCACGGGCATGAGCCTTCCCGGGTAGAAGTGGAAGAGCTGTTGGCAAT
ATACAAAAGCAGTCTCCGTGCCGCCCTGACACTGAAGGCTGGGGCACTTC
GTCTCCTACAGAAGCTCAAGTCCCATGGGAAGAAAGTTATTATTATCACC
GAGGGTCCACAAGATGCACAGGAATGGACGGTGTCAGAGCTTGGGTTACA
GCCATTCATAGATATCCTCGTCACCACCAATGAGGTCGGAGTGTCCAAGG
TGGATGGTCTATTTTCCGCTGTTCTGGAAAGGCATAGCATCGTCCCAACT
GACATGGTCTATGTGGGGATAGCGAACAGCGTGACATCGGACCAGCACGG
GCTGCAGGGATAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:4088519..4090031- >CAN33_28205-T1 ID=CAN33_28205-T1|Name=CAN33_28205-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2922bp|location=Sequence derived from alignment at NKJJ01000002.1:4088519..4090031- (Aspergillus niger FDAARGOS_311)
CAACAAACCCAGATTCGGGTCCTAGTCGCCTGCCCTCGTTCGGGCTCCAC
ACTCTTCATGCGTATCTTTCGCGAACTCCCTCGTTGTGCGGTTACGAGTC
GCTTGATTCTGCAAGGCAACTACCACAAATTCAGCGACCAAACTCTAGCT
CGAATCAAGCCCGACTATACTATCTTCTCTCATCCAGAAGCCCATCCCGT
CTACCATCAAGCGGTGTCAGAAGGCTTCACCACTCTGGTCACGAAAGAGG
AATTGGGTCACGAGTTCTTCAAGGGTGAATGCGACTTCAACATCCTGCCC
GATCGAGCAGCCTACGAGATGACGCGGCCCGCGTTTCTTGTCCGGGACCC
AGTGCGTGTCTTTGATAGCTGGAAAAATATGGGCTGGGGCGACCTATACA
GCTTTTTCATTTGCTATCGTTCACTTTTCAGAATGCTCAATGCTAGCCCA
GCACCTCAAGTTGTCCTGTATGAACAATTGGTGGCCGACCCCAGAGACAC
AGTAACCGCACTGGCACAGTACTGGGGCATCGCATACGATGAAGGCTGTT
TGGAATTTAGGCAGCCGTTTGGGGATTACCTATTCAACGGTGACCGAGAA
CAATCGATCTATCAGGGTGCCGTTCCTGCCGGCCTCTTCAACCGCGTCAA
GTCCCACACCCATGTTGAAGACTTCCAGGGCCATGGTCTGCTATCCGCAC
TGGAAATTGAACATATCGAAGCCGAAGTAGGCGGCCTGTACCTTGAGGCT
TATGGCTCACAGCTAGACCCCATTTCAAGTCTTCTCTTCAAAAAGACGTG
GTTTGGTTTCGATCTAGATGACACACTGCACGAGTTTCGCAAGGCGTCTG
CCCATGCATCCCAATCAGTCTTCGCGGCAATTCGAGTCAACCATCCCGAG
AGCAAAGACACAATTGACGATCTCCAGGCGACCTATCGTGACATCCTTCG
GTCAAATTCTTCAAATGCGTTCACAGATGGAAAGTCATCCGAAGATTACC
GCAGTGATAGATTTCAACGTTTGCTCGAAGCCCACGGGCATGAGCCTTCC
CGGGTAGAAGTGGAAGAGCTGTTGGCAATATACAAAAGCAGTCTCCGTGC
CGCCCTGACACTGAAGGCTGGGGCACTTCGTCTCCTACAGAAGCTCAAGT
CCCATGGGAAGAAAGTTATTATTATCACCGAGGGTCCACAAGATGCACAG
GAATGGACGGTGTCAGAGCTTGGGTTACAGCCATTCATAGATATCCTCGT
CACCACCAATGAGGTCGGAGTGTCCAAGGTGGATGGTCTATTTTCCGCTG
TTCTGGAAAGGCATAGCATCGTCCCAACTGACATGGTCTATGTGGGGATA
GCGAACAGCGTGACATCGGACCAGCACGGGCTGCAGGGATAGATGCCTCA
CTCAGAAGCCCCTCAGGAGCAAACGATTGCCAGTGCCGACGTGACGAGCG
GCGCTCAGGGCCAACAAACCCAGATTCGGGTCCTAGTCGCCTGCCCTCGT
TCGGGCTCCACACTCTTCATGCGTATCTTTCGCGAACTCCCTCGTTGTGC
GGTTACGAGTCGCTTGATTCTGCAAGGCAACTACCACAAATTCAGCGACC
AAACTCTAGCTCGAATCAAGCCCGACTATACTATCTTCTCTCATCCAGAA
GCCCATCCCGTCTACCATCAAGCGGTGTCAGAAGGCTTCACCACTCTGGT
CACGAAAGAGGAATTGGGTCACGAGTTCTTCAAGGGTGAATGCGACTTCA
ACATCCTGCCCGATCGAGCAGCCTACGAGATGACGCGGCCCGCGTTTCTT
GTCCGGGACCCAGTGCGTGTCTTTGATAGCTGGAAAAATATGGGCTGGGG
CGACCTATACAGCTTTTTCATTTGCTATCGTTCACTTTTCAGAATGCTCA
ATGCTAGCCCAGCACCTCAAGTTGTCCTGTATGAACAATTGGTGGCCGAC
CCCAGAGACACAGTAACCGCACTGGCACAGTACTGGGGCATCGCATACGA
TGAAGGCTGTTTGGAATTTAGGCAGCCGTTTGGGGATTACCTATTCAACG
GTGACCGAGAACAATCGATCTATCAGGGTGCCGTTCCTGCCGGCCTCTTC
AACCGCGTCAAGTCCCACACCCATGTTGAAGACTTCCAGGGCCATGGTCT
GCTATCCGCACTGGAAATTGAACATATCGAAGCCGAAGTAGGCGGCCTGT
ACCTTGAGGCTTATGGCTCACAGCTAGACCCCATTTCAAGTCTTCTCTTC
AAAAAGACGTGGTTTGGTTTCGATCTAGATGACACACTGCACGAGTTTCG
CAAGGCGTCTGCCCATGCATCCCAATCAGTCTTCGCGGCAATTCGAGTCA
ACCATCCCGAGAGCAAAGACACAATTGACGATCTCCAGGCGACCTATCGT
GACATCCTTCGGTCAAATTCTTCAAATGCGTTCACAGATGGAAAGTCATC
CGAAGATTACCGCAGTGATAGATTTCAACGTTTGCTCGAAGCCCACGGGC
ATGAGCCTTCCCGGGTAGAAGTGGAAGAGCTGTTGGCAATATACAAAAGC
AGTCTCCGTGCCGCCCTGACACTGAAGGCTGGGGCACTTCGTCTCCTACA
GAAGCTCAAGTCCCATGGGAAGAAAGTTATTATTATCACCGAGGGTCCAC
AAGATGCACAGGAATGGACGGTGTCAGAGCTTGGGTTACAGCCATTCATA
GATATCCTCGTCACCACCAATGAGGTCGGAGTGTCCAAGGTGGATGGTCT
ATTTTCCGCTGTTCTGGAAAGGCATAGCATCGTCCCAACTGACATGGTCT
ATGTGGGGATAGCGAACAGCGTGACATCGGACCAGCACGGGCTGCAGGGA
TAGATGCCTCACTCAGAAGCCCCTCAGGAGCAAACGATTGCCAGTGCCGA
CGTGACGAGCGGCGCTCAGGGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR023214 |
| DBxref | InterPro:IPR023198 |
| DBxref | InterPro:IPR041492 |
| DBxref | PFAM:PF13419 |
| Product | Haloacid dehalogenase-like hydrolase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:4088519..4090031 - |
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