You are here

Home

CAN33_28268-T1, CAN33_28268-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28268-T1
Unique NameCAN33_28268-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2020820..2022720-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28268-T1 ID=CAN33_28268-T1|Name=CAN33_28268-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1901bp|location=Sequence derived from alignment at NKJJ01000002.1:2020820..2022720- (Aspergillus niger FDAARGOS_311)
ATGGACGTCGTATTCAATTCATTCACGCTGTTAACAATACTTGCGATGAA
AGAACTAATAAGAGACACAGCCTTTGGGAAGCTCGTCCGAATCTTGAGCG
GTCGGCGGCTCTTGCTGTACCCTGAAGAACGGGACCTGGAATTGACCTTC
ATGCAAGAACCGCCTGATGTCGCGGCTAAAGAGGAGGTCGCTTTGCCAGA
TATTACTCGCAATGAAAGCATCATTGAGCCCAACAGATTGGAAACTATCA
TGTCTCAGGCGTCTTACCGGTCACATCGAGGATCCTGGCCGGCACCTGCT
CCTCAAGACAAAAGGCCTATAATCGTAGGGTGGAGACCAGGTGATAGTGA
GGTATTATGCTTATCATTCGCGTGTATTTTTCAGGGTTACAGAGACTGAC
AGGTGATAGAATCCGCAAAACTGGAGTACTATCAAAAAGTTCCTAGTCAG
CTGCCTAGTATGGATCTTGACTTTTGCAATCTACATCGGCTCGGCTATCT
ACTCACCAGGCATTCCCGATGTAGCGGAGCAATTTGGAGTCAGCAATGTA
GCTGCCACTCTGGGCCTTACACTGTTCGTGCTAGGCTATGGCATCGGTAA
GATCATTGACAGCCTCAGAAATAACACTACAACTCACTAACACTTGAATT
ATCTGTCAGGCCCCATGATATGGTCGCCTCTTTCTGAGCTTCCCATGGTT
GGAAGAAGTCCAATCTACGTGCTGACGCTTTTCGTGTTTGTATTCCTCAA
CTTCGCAGTCGTATATGCGAAAAATTTTGGGATGTTACTGGCATTTCGCT
TTCTGACTGGATTAATCGGCTCGCCAGCCCTAGCAACCGGGGGCGCTTCA
ATGGCAGATCTATGGAGCCCCAGGGCTCGCGACTATATGATCGTCATATG
GGGTGCATTTGCCATCGCCGCACCGGTTCTTGGGCCCCTGGTTGGTGGAT
TTGCTTCATCTGCCAATGGTTGGACGTGGACAATCTGGCAGTTGATCTGG
GTCTCTGGGCTTGTTCTTGTTTTACTATTTTTCTTGTTGCCGGAGACTTA
TGGTCCAAACATTCTTTATCGTCGCGCACGGCGGATGCGCCAACTGAGCA
AGTTGAATGTTTACTCCGGGGCCGAGCTTGAGCTTCGCCAAATACCATCT
ACGGTATGCTATCGGTATGTAGTTCTTTTCTAAACCAGCGCTCACAAAAT
ATCAGGATATCGTGTATGAAGCTCTAGTTCGTCCGTTTCAATTGTGCTTT
CTAGAGCCAATCGTTCTCGCCATGAACATCTACATCTCCCTCGTTTACGG
TATCCTCTACATATGGTTCGAGGCTTTCCCTATCGTCTTTCAGGAAATTC
ATGGATTCAATCCGGGTGAAAGCGGGATGTCGTTCCTAGGAATTATAACT
GGTACTGTAGCTTTTGCTATCCCTGGCTACTTCACATGGAAATACTTCTA
CCAGTCGAAGCTGGTTGGGGACAACGACGAGTCATTCCCACCTGAATATG
AGCTACCTCCAGCCTGTGTGGGCAGCATCTGCTTACCCATCTCTCTATTT
TGGTTTGGATGGACCGGTAACTTCGAGTCTGTTCACTGGATAGCCCCGAT
TGCTGCTGCGGCGCTATTCTCAGTGGGTGGATGCTTGATCTTTAACCCAA
TATTTTGCTACCTGGCCCGTGCCTATCCAAGGTATGCAGCATCGGTGCTT
GCCGGCAACGACTTCATGCGTTCGTCGTTTGGAGCCGGCTTTCCCTTGTT
CGCAGCTGCTATGTTTCATCATCTTGGGGTAGGTTGGGCTTGTACGTTGC
TGGGCTGTTTGACTTGTCTTTTCGTGCCATTTCCATTTGTTCTTTATTGG
CGTGGGAAGCAGCTCCGCTTGAGGAGCAAGTTTGCGCGGCATGACATCTG
A
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:2020820..2022720-

>CAN33_28268-T1 ID=CAN33_28268-T1|Name=CAN33_28268-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6912bp|location=Sequence derived from alignment at NKJJ01000002.1:2020820..2022720- (Aspergillus niger FDAARGOS_311)
GATATCGTGTATGAAGCTCTAGTTCGTCCGTTTCAATTGTGCTTTCTAGA
GCCAATCGTTCTCGCCATGAACATCTACATCTCCCTCGTTTACGGTATCC
TCTACATATGGTTCGAGGCTTTCCCTATCGTCTTTCAGGAAATTCATGGA
TTCAATCCGGGTGAAAGCGGGATGTCGTTCCTAGGAATTATAACTGGTAC
TGTAGCTTTTGCTATCCCTGGCTACTTCACATGGAAATACTTCTACCAGT
CGAAGCTGGTTGGGGACAACGACGAGTCATTCCCACCTGAATATGAGCTA
CCTCCAGCCTGTGTGGGCAGCATCTGCTTACCCATCTCTCTATTTTGGTT
TGGATGGACCGGTAACTTCGAGTCTGTTCACTGGATAGCCCCGATTGCTG
CTGCGGCGCTATTCTCAGTGGGTGGATGCTTGATCTTTAACCCAATATTT
TGCTACCTGGCCCGTGCCTATCCAAGGTATGCAGCATCGGTGCTTGCCGG
CAACGACTTCATGCGTTCGTCGTTTGGAGCCGGCTTTCCCTTGTTCGCAG
CTGCTATGTTTCATCATCTTGGGGTAGGTTGGGCTTGTACGTTGCTGGGC
TGTTTGACTTGTCTTTTCGTGCCATTTCCATTTGTTCTTTATTGGCGTGG
GAAGCAGCTCCGCTTGAGGAGCAAGTTTGCGCGGCATGACATCTGAGCCC
CATGATATGGTCGCCTCTTTCTGAGCTTCCCATGGTTGGAAGAAGTCCAA
TCTACGTGCTGACGCTTTTCGTGTTTGTATTCCTCAACTTCGCAGTCGTA
TATGCGAAAAATTTTGGGATGTTACTGGCATTTCGCTTTCTGACTGGATT
AATCGGCTCGCCAGCCCTAGCAACCGGGGGCGCTTCAATGGCAGATCTAT
GGAGCCCCAGGGCTCGCGACTATATGATCGTCATATGGGGTGCATTTGCC
ATCGCCGCACCGGTTCTTGGGCCCCTGGTTGGTGGATTTGCTTCATCTGC
CAATGGTTGGACGTGGACAATCTGGCAGTTGATCTGGGTCTCTGGGCTTG
TTCTTGTTTTACTATTTTTCTTGTTGCCGGAGACTTATGGTCCAAACATT
CTTTATCGTCGCGCACGGCGGATGCGCCAACTGAGCAAGTTGAATGTTTA
CTCCGGGGCCGAGCTTGAGCTTCGCCAAATACCATCTACGAATCCGCAAA
ACTGGAGTACTATCAAAAAGTTCCTAGTCAGCTGCCTAGTATGGATCTTG
ACTTTTGCAATCTACATCGGCTCGGCTATCTACTCACCAGGCATTCCCGA
TGTAGCGGAGCAATTTGGAGTCAGCAATGTAGCTGCCACTCTGGGCCTTA
CACTGTTCGTGCTAGGCTATGGCATCGATGGACGTCGTATTCAATTCATT
CACGCTGTTAACAATACTTGCGATGAAAGAACTAATAAGAGACACAGCCT
TTGGGAAGCTCGTCCGAATCTTGAGCGGTCGGCGGCTCTTGCTGTACCCT
GAAGAACGGGACCTGGAATTGACCTTCATGCAAGAACCGCCTGATGTCGC
GGCTAAAGAGGAGGTCGCTTTGCCAGATATTACTCGCAATGAAAGCATCA
TTGAGCCCAACAGATTGGAAACTATCATGTCTCAGGCGTCTTACCGGTCA
CATCGAGGATCCTGGCCGGCACCTGCTCCTCAAGACAAAAGGCCTATAAT
CGTAGGGTGGAGACCAGGTGATAGTGAGGATATCGTGTATGAAGCTCTAG
TTCGTCCGTTTCAATTGTGCTTTCTAGAGCCAATCGTTCTCGCCATGAAC
ATCTACATCTCCCTCGTTTACGGTATCCTCTACATATGGTTCGAGGCTTT
CCCTATCGTCTTTCAGGAAATTCATGGATTCAATCCGGGTGAAAGCGGGA
TGTCGTTCCTAGGAATTATAACTGGTACTGTAGCTTTTGCTATCCCTGGC
TACTTCACATGGAAATACTTCTACCAGTCGAAGCTGGTTGGGGACAACGA
CGAGTCATTCCCACCTGAATATGAGCTACCTCCAGCCTGTGTGGGCAGCA
TCTGCTTACCCATCTCTCTATTTTGGTTTGGATGGACCGGTAACTTCGAG
TCTGTTCACTGGATAGCCCCGATTGCTGCTGCGGCGCTATTCTCAGTGGG
TGGATGCTTGATCTTTAACCCAATATTTTGCTACCTGGCCCGTGCCTATC
CAAGGTATGCAGCATCGGTGCTTGCCGGCAACGACTTCATGCGTTCGTCG
TTTGGAGCCGGCTTTCCCTTGTTCGCAGCTGCTATGTTTCATCATCTTGG
GGTAGGTTGGGCTTGTACGTTGCTGGGCTGTTTGACTTGTCTTTTCGTGC
CATTTCCATTTGTTCTTTATTGGCGTGGGAAGCAGCTCCGCTTGAGGAGC
AAGTTTGCGCGGCATGACATCTGAGCCCCATGATATGGTCGCCTCTTTCT
GAGCTTCCCATGGTTGGAAGAAGTCCAATCTACGTGCTGACGCTTTTCGT
GTTTGTATTCCTCAACTTCGCAGTCGTATATGCGAAAAATTTTGGGATGT
TACTGGCATTTCGCTTTCTGACTGGATTAATCGGCTCGCCAGCCCTAGCA
ACCGGGGGCGCTTCAATGGCAGATCTATGGAGCCCCAGGGCTCGCGACTA
TATGATCGTCATATGGGGTGCATTTGCCATCGCCGCACCGGTTCTTGGGC
CCCTGGTTGGTGGATTTGCTTCATCTGCCAATGGTTGGACGTGGACAATC
TGGCAGTTGATCTGGGTCTCTGGGCTTGTTCTTGTTTTACTATTTTTCTT
GTTGCCGGAGACTTATGGTCCAAACATTCTTTATCGTCGCGCACGGCGGA
TGCGCCAACTGAGCAAGTTGAATGTTTACTCCGGGGCCGAGCTTGAGCTT
CGCCAAATACCATCTACGAATCCGCAAAACTGGAGTACTATCAAAAAGTT
CCTAGTCAGCTGCCTAGTATGGATCTTGACTTTTGCAATCTACATCGGCT
CGGCTATCTACTCACCAGGCATTCCCGATGTAGCGGAGCAATTTGGAGTC
AGCAATGTAGCTGCCACTCTGGGCCTTACACTGTTCGTGCTAGGCTATGG
CATCGATGGACGTCGTATTCAATTCATTCACGCTGTTAACAATACTTGCG
ATGAAAGAACTAATAAGAGACACAGCCTTTGGGAAGCTCGTCCGAATCTT
GAGCGGTCGGCGGCTCTTGCTGTACCCTGAAGAACGGGACCTGGAATTGA
CCTTCATGCAAGAACCGCCTGATGTCGCGGCTAAAGAGGAGGTCGCTTTG
CCAGATATTACTCGCAATGAAAGCATCATTGAGCCCAACAGATTGGAAAC
TATCATGTCTCAGGCGTCTTACCGGTCACATCGAGGATCCTGGCCGGCAC
CTGCTCCTCAAGACAAAAGGCCTATAATCGTAGGGTGGAGACCAGGTGAT
AGTGAGGATATCGTGTATGAAGCTCTAGTTCGTCCGTTTCAATTGTGCTT
TCTAGAGCCAATCGTTCTCGCCATGAACATCTACATCTCCCTCGTTTACG
GTATCCTCTACATATGGTTCGAGGCTTTCCCTATCGTCTTTCAGGAAATT
CATGGATTCAATCCGGGTGAAAGCGGGATGTCGTTCCTAGGAATTATAAC
TGGTACTGTAGCTTTTGCTATCCCTGGCTACTTCACATGGAAATACTTCT
ACCAGTCGAAGCTGGTTGGGGACAACGACGAGTCATTCCCACCTGAATAT
GAGCTACCTCCAGCCTGTGTGGGCAGCATCTGCTTACCCATCTCTCTATT
TTGGTTTGGATGGACCGGTAACTTCGAGTCTGTTCACTGGATAGCCCCGA
TTGCTGCTGCGGCGCTATTCTCAGTGGGTGGATGCTTGATCTTTAACCCA
ATATTTTGCTACCTGGCCCGTGCCTATCCAAGGTATGCAGCATCGGTGCT
TGCCGGCAACGACTTCATGCGTTCGTCGTTTGGAGCCGGCTTTCCCTTGT
TCGCAGCTGCTATGTTTCATCATCTTGGGGTAGGTTGGGCTTGTACGTTG
CTGGGCTGTTTGACTTGTCTTTTCGTGCCATTTCCATTTGTTCTTTATTG
GCGTGGGAAGCAGCTCCGCTTGAGGAGCAAGTTTGCGCGGCATGACATCT
GAGCCCCATGATATGGTCGCCTCTTTCTGAGCTTCCCATGGTTGGAAGAA
GTCCAATCTACGTGCTGACGCTTTTCGTGTTTGTATTCCTCAACTTCGCA
GTCGTATATGCGAAAAATTTTGGGATGTTACTGGCATTTCGCTTTCTGAC
TGGATTAATCGGCTCGCCAGCCCTAGCAACCGGGGGCGCTTCAATGGCAG
ATCTATGGAGCCCCAGGGCTCGCGACTATATGATCGTCATATGGGGTGCA
TTTGCCATCGCCGCACCGGTTCTTGGGCCCCTGGTTGGTGGATTTGCTTC
ATCTGCCAATGGTTGGACGTGGACAATCTGGCAGTTGATCTGGGTCTCTG
GGCTTGTTCTTGTTTTACTATTTTTCTTGTTGCCGGAGACTTATGGTCCA
AACATTCTTTATCGTCGCGCACGGCGGATGCGCCAACTGAGCAAGTTGAA
TGTTTACTCCGGGGCCGAGCTTGAGCTTCGCCAAATACCATCTACGAATC
CGCAAAACTGGAGTACTATCAAAAAGTTCCTAGTCAGCTGCCTAGTATGG
ATCTTGACTTTTGCAATCTACATCGGCTCGGCTATCTACTCACCAGGCAT
TCCCGATGTAGCGGAGCAATTTGGAGTCAGCAATGTAGCTGCCACTCTGG
GCCTTACACTGTTCGTGCTAGGCTATGGCATCGATGGACGTCGTATTCAA
TTCATTCACGCTGTTAACAATACTTGCGATGAAAGAACTAATAAGAGACA
CAGCCTTTGGGAAGCTCGTCCGAATCTTGAGCGGTCGGCGGCTCTTGCTG
TACCCTGAAGAACGGGACCTGGAATTGACCTTCATGCAAGAACCGCCTGA
TGTCGCGGCTAAAGAGGAGGTCGCTTTGCCAGATATTACTCGCAATGAAA
GCATCATTGAGCCCAACAGATTGGAAACTATCATGTCTCAGGCGTCTTAC
CGGTCACATCGAGGATCCTGGCCGGCACCTGCTCCTCAAGACAAAAGGCC
TATAATCGTAGGGTGGAGACCAGGTGATAGTGAGGATATCGTGTATGAAG
CTCTAGTTCGTCCGTTTCAATTGTGCTTTCTAGAGCCAATCGTTCTCGCC
ATGAACATCTACATCTCCCTCGTTTACGGTATCCTCTACATATGGTTCGA
GGCTTTCCCTATCGTCTTTCAGGAAATTCATGGATTCAATCCGGGTGAAA
GCGGGATGTCGTTCCTAGGAATTATAACTGGTACTGTAGCTTTTGCTATC
CCTGGCTACTTCACATGGAAATACTTCTACCAGTCGAAGCTGGTTGGGGA
CAACGACGAGTCATTCCCACCTGAATATGAGCTACCTCCAGCCTGTGTGG
GCAGCATCTGCTTACCCATCTCTCTATTTTGGTTTGGATGGACCGGTAAC
TTCGAGTCTGTTCACTGGATAGCCCCGATTGCTGCTGCGGCGCTATTCTC
AGTGGGTGGATGCTTGATCTTTAACCCAATATTTTGCTACCTGGCCCGTG
CCTATCCAAGGTATGCAGCATCGGTGCTTGCCGGCAACGACTTCATGCGT
TCGTCGTTTGGAGCCGGCTTTCCCTTGTTCGCAGCTGCTATGTTTCATCA
TCTTGGGGTAGGTTGGGCTTGTACGTTGCTGGGCTGTTTGACTTGTCTTT
TCGTGCCATTTCCATTTGTTCTTTATTGGCGTGGGAAGCAGCTCCGCTTG
AGGAGCAAGTTTGCGCGGCATGACATCTGAGCCCCATGATATGGTCGCCT
CTTTCTGAGCTTCCCATGGTTGGAAGAAGTCCAATCTACGTGCTGACGCT
TTTCGTGTTTGTATTCCTCAACTTCGCAGTCGTATATGCGAAAAATTTTG
GGATGTTACTGGCATTTCGCTTTCTGACTGGATTAATCGGCTCGCCAGCC
CTAGCAACCGGGGGCGCTTCAATGGCAGATCTATGGAGCCCCAGGGCTCG
CGACTATATGATCGTCATATGGGGTGCATTTGCCATCGCCGCACCGGTTC
TTGGGCCCCTGGTTGGTGGATTTGCTTCATCTGCCAATGGTTGGACGTGG
ACAATCTGGCAGTTGATCTGGGTCTCTGGGCTTGTTCTTGTTTTACTATT
TTTCTTGTTGCCGGAGACTTATGGTCCAAACATTCTTTATCGTCGCGCAC
GGCGGATGCGCCAACTGAGCAAGTTGAATGTTTACTCCGGGGCCGAGCTT
GAGCTTCGCCAAATACCATCTACGAATCCGCAAAACTGGAGTACTATCAA
AAAGTTCCTAGTCAGCTGCCTAGTATGGATCTTGACTTTTGCAATCTACA
TCGGCTCGGCTATCTACTCACCAGGCATTCCCGATGTAGCGGAGCAATTT
GGAGTCAGCAATGTAGCTGCCACTCTGGGCCTTACACTGTTCGTGCTAGG
CTATGGCATCGATGGACGTCGTATTCAATTCATTCACGCTGTTAACAATA
CTTGCGATGAAAGAACTAATAAGAGACACAGCCTTTGGGAAGCTCGTCCG
AATCTTGAGCGGTCGGCGGCTCTTGCTGTACCCTGAAGAACGGGACCTGG
AATTGACCTTCATGCAAGAACCGCCTGATGTCGCGGCTAAAGAGGAGGTC
GCTTTGCCAGATATTACTCGCAATGAAAGCATCATTGAGCCCAACAGATT
GGAAACTATCATGTCTCAGGCGTCTTACCGGTCACATCGAGGATCCTGGC
CGGCACCTGCTCCTCAAGACAAAAGGCCTATAATCGTAGGGTGGAGACCA
GGTGATAGTGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28268CAN33_28268Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28268-T1CAN33_28268-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28268-T1.cdsCAN33_28268-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28268-T1.exon4CAN33_28268-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_28268-T1.exon3CAN33_28268-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_28268-T1.exon2CAN33_28268-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28268-T1.exon1CAN33_28268-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2020820..2022720 -
Powered by Drupal