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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000008.1:179165..180443+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_28470-T1 ID=CAN33_28470-T1|Name=CAN33_28470-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1279bp|location=Sequence derived from alignment at NKJJ01000008.1:179165..180443+ (Aspergillus niger FDAARGOS_311)
ATGGGCACCCCGATAAATCGTGAAGAGATTGACCGCGTGCTGCGAATGAA
ACGCAATCAGCGCGAGGCTCGAGCGTGTTATCCTTGCCGCCAGCGCAAGG
TGAAATGCGACAGCACTCAGCCGTGTCGAACATGTCGCCGACGAGGCCAT
CCCCAAATATGTGTGTATGACCAAGATTCGTCTGGGTCTAAAAAGGCTCG
TAGCACCGGCCAAAGACGTTCCTCTGCTGCTTCTCGTGGAACAAATCAGA
CACCAACCGCCGAGCAGGCATTCGATGCCGAACCACAATCTCTGCCCTCA
GCGCGCAGTTTACCAGAAGTCCAGCCAGAAACAAGACAGTACTATAGTAC
TCGAATCCCGTCTTCCGATGGCCCCGATAATGATCTTATCTACTCGGGCG
ACAACTCGGTATTGTCTTATTTGCGCAACCGGACGCAAGATACCAATGGC
TCCATGACCCGTGAGGTGGGCTCTGTTCTAGGCCTGCAAAATACCTACGG
CAGTTATCCATTTATGGACTTTCGGACACCCCAGGACCGGTGGAAGGAGC
TTCTACGTATTATTCCGCAGCGAGCGGAACTGTTGAAGTAAGCACATCTT
ATTGTTGTTTTTGATAACCTCTAACGGATAGCAGGTTCTTCCATTTCTAC
AGAATATCAGCTTACCCTTTCAATCCGATCATACTTGACATTGAGAGATT
TGAGCAAGATGTGTGTTCATACCTCAATGATCTTGCAGCAGGAGAGCTGC
AGAACACTTCAAAGATTTGCGAACGTTGGGCCACTGATCGGTCTGTCGGG
CTGATCAGCCTGCTACTTGCGGCCTTGGCTTCCGGTGCGCATTATTCTGA
CCTGGATTACATGCAAAGAACAGAGCTATGCCAGGATTTTGGTACGTAAC
CAGTATCTTTACCTATGCATGTTTGACTAAACAGGAGAAGCAAAACGATC
CTTTCAAGCTCTTCGACTAGCCAATTTTCTTTTCCGTCCGACGATGGATA
TAATACAAGCACTTCTAATCATAGGAAACACTCTGCAAAACAATGGCCAG
TCTGATGCAGCATGGGTTTTGTTAGGGACAACAGTCCGTCTCGCGCAGAC
ATTAGGTCTTCACACAGAAAAGAGTGTAGCACGCCTACCGGATCATGTCA
AATACAAAGCACGAAAGCTATGGTACATAAACCATGCTACAGGTAACGAC
ACAAGCTGACGCGGCTACAGGTACACTGTCGTTTGGCAAGATTGCCTGCT
CTGTTTATGTTACGACCGGCCTCGCGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000008.1:179165..180443+ >CAN33_28470-T1 ID=CAN33_28470-T1|Name=CAN33_28470-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2709bp|location=Sequence derived from alignment at NKJJ01000008.1:179165..180443+ (Aspergillus niger FDAARGOS_311)
ATGGGCACCCCGATAAATCGTGAAGAGATTGACCGCGTGCTGCGAATGAA
ACGCAATCAGCGCGAGGCTCGAGCGTGTTATCCTTGCCGCCAGCGCAAGG
TGAAATGCGACAGCACTCAGCCGTGTCGAACATGTCGCCGACGAGGCCAT
CCCCAAATATGTGTGTATGACCAAGATTCGTCTGGGTCTAAAAAGGCTCG
TAGCACCGGCCAAAGACGTTCCTCTGCTGCTTCTCGTGGAACAAATCAGA
CACCAACCGCCGAGCAGGCATTCGATGCCGAACCACAATCTCTGCCCTCA
GCGCGCAGTTTACCAGAAGTCCAGCCAGAAACAAGACAGTACTATAGTAC
TCGAATCCCGTCTTCCGATGGCCCCGATAATGATCTTATCTACTCGGGCG
ACAACTCGGTATTGTCTTATTTGCGCAACCGGACGCAAGATACCAATGGC
TCCATGACCCGTGAGGTGGGCTCTGTTCTAGGCCTGCAAAATACCTACGG
CAGTTATCCATTTATGGACTTTCGGACACCCCAGGACCGGTGGAAGGAGC
TTCTACGTATTATTCCGCAGCGAGCGGAACTGTTGAAGTTCTTCCATTTC
TACAGAATATCAGCTTACCCTTTCAATCCGATCATACTTGACATTGAGAG
ATTTGAGCAAGATGTGTGTTCATACCTCAATGATCTTGCAGCAGGAGAGC
TGCAGAACACTTCAAAGATTTGCGAACGTTGGGCCACTGATCGGTCTGTC
GGGCTGATCAGCCTGCTACTTGCGGCCTTGGCTTCCGGTGCGCATTATTC
TGACCTGGATTACATGCAAAGAACAGAGCTATGCCAGGATTTTGGTACAC
TGTCGTTTGGCAAGATTGCCTGCTCTGTTTATGTTACGACCGGCCTCGCG
TAGATGGGCACCCCGATAAATCGTGAAGAGATTGACCGCGTGCTGCGAAT
GAAACGCAATCAGCGCGAGGCTCGAGCGTGTTATCCTTGCCGCCAGCGCA
AGGTGAAATGCGACAGCACTCAGCCGTGTCGAACATGTCGCCGACGAGGC
CATCCCCAAATATGTGTGTATGACCAAGATTCGTCTGGGTCTAAAAAGGC
TCGTAGCACCGGCCAAAGACGTTCCTCTGCTGCTTCTCGTGGAACAAATC
AGACACCAACCGCCGAGCAGGCATTCGATGCCGAACCACAATCTCTGCCC
TCAGCGCGCAGTTTACCAGAAGTCCAGCCAGAAACAAGACAGTACTATAG
TACTCGAATCCCGTCTTCCGATGGCCCCGATAATGATCTTATCTACTCGG
GCGACAACTCGGTATTGTCTTATTTGCGCAACCGGACGCAAGATACCAAT
GGCTCCATGACCCGTGAGGTGGGCTCTGTTCTAGGCCTGCAAAATACCTA
CGGCAGTTATCCATTTATGGACTTTCGGACACCCCAGGACCGGTGGAAGG
AGCTTCTACGTATTATTCCGCAGCGAGCGGAACTGTTGAAGTTCTTCCAT
TTCTACAGAATATCAGCTTACCCTTTCAATCCGATCATACTTGACATTGA
GAGATTTGAGCAAGATGTGTGTTCATACCTCAATGATCTTGCAGCAGGAG
AGCTGCAGAACACTTCAAAGATTTGCGAACGTTGGGCCACTGATCGGTCT
GTCGGGCTGATCAGCCTGCTACTTGCGGCCTTGGCTTCCGGTGCGCATTA
TTCTGACCTGGATTACATGCAAAGAACAGAGCTATGCCAGGATTTTGGTA
CACTGTCGTTTGGCAAGATTGCCTGCTCTGTTTATGTTACGACCGGCCTC
GCGTAGATGGGCACCCCGATAAATCGTGAAGAGATTGACCGCGTGCTGCG
AATGAAACGCAATCAGCGCGAGGCTCGAGCGTGTTATCCTTGCCGCCAGC
GCAAGGTGAAATGCGACAGCACTCAGCCGTGTCGAACATGTCGCCGACGA
GGCCATCCCCAAATATGTGTGTATGACCAAGATTCGTCTGGGTCTAAAAA
GGCTCGTAGCACCGGCCAAAGACGTTCCTCTGCTGCTTCTCGTGGAACAA
ATCAGACACCAACCGCCGAGCAGGCATTCGATGCCGAACCACAATCTCTG
CCCTCAGCGCGCAGTTTACCAGAAGTCCAGCCAGAAACAAGACAGTACTA
TAGTACTCGAATCCCGTCTTCCGATGGCCCCGATAATGATCTTATCTACT
CGGGCGACAACTCGGTATTGTCTTATTTGCGCAACCGGACGCAAGATACC
AATGGCTCCATGACCCGTGAGGTGGGCTCTGTTCTAGGCCTGCAAAATAC
CTACGGCAGTTATCCATTTATGGACTTTCGGACACCCCAGGACCGGTGGA
AGGAGCTTCTACGTATTATTCCGCAGCGAGCGGAACTGTTGAAGTTCTTC
CATTTCTACAGAATATCAGCTTACCCTTTCAATCCGATCATACTTGACAT
TGAGAGATTTGAGCAAGATGTGTGTTCATACCTCAATGATCTTGCAGCAG
GAGAGCTGCAGAACACTTCAAAGATTTGCGAACGTTGGGCCACTGATCGG
TCTGTCGGGCTGATCAGCCTGCTACTTGCGGCCTTGGCTTCCGGTGCGCA
TTATTCTGACCTGGATTACATGCAAAGAACAGAGCTATGCCAGGATTTTG
GTACACTGTCGTTTGGCAAGATTGCCTGCTCTGTTTATGTTACGACCGGC
CTCGCGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal Zn(2)-Cys(6) binuclear cluster domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000008.1 | supercontig | NKJJ01000008.1:179165..180443 + |
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