You are here

Home

CAN33_28475-T1, CAN33_28475-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28475-T1
Unique NameCAN33_28475-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:180542..181388+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28475-T1 ID=CAN33_28475-T1|Name=CAN33_28475-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=847bp|location=Sequence derived from alignment at NKJJ01000008.1:180542..181388+ (Aspergillus niger FDAARGOS_311)
ATGATCACAACAGACGGACCGGAGATATCGGAAAATGCGCGACAGCTTGA
CATTTTGGCCACGATTGATAGCCTCAACCAACGCACTCAGCCATATCTGC
GTGACCGCCAGGAATGCAAAACCCTCCAACACAATCTGGAGCACCTGGCG
TTACGAATGCACATGTCTCTAGTTATTTCCGTCCTGACACGTCCAGCACT
GAAGCGCACTGTAATGCAAGACGCGTCCTATGACATCTTGCGCACCCGCG
CCAAATTGAGCCTGATCGACGCCTCTAGGGCCTTTTTGGATTTTCAGGCT
CTGAGTGTGGTACCCCTCCGAAGCTGGTCAATGGTGCACACGGTGCTTAG
TTCCACTTTACTTCTCTGCATTTGGGAGGAGACCCGAAACGATCCCGAGT
GTCGTGATTTACAGCAAAAGGTGATTGAGGTCTTTTCTGCCGCTGGCACA
GTGGGCACAGTGGAGAACACAGCATCGGAGAATGGGCAATGGCTATCGGA
ACGGCATATACGAGCGCTAATCACACTGCGCAATTCGGTCCGAACGGCAG
TCGAACGTGAAAAGGGGGAGGCAAGCGTTGGGACAGAACGCGCGGAGCAG
CCCCAGCCTTTTTTTCCTGTCTATGGGTATGTGCACCCGCTATTGTCTGA
TAAGTGGAGCTGTGCGATGGATGCTGATTTTGCAGTATGCCGAACGGGAT
CCCGGATGACTTCGGTCAAGACTTCTCACCAGCAAGCTATCTTGACTCCA
TTATGAACGGTATGCTGAGGCTCCCGACTATTTATCGATCGAACTAACCG
TCGTAGTACCCATGTTTGACTTATCCCAAGAGCTGGGTTTTCTTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000008.1:180542..181388+

>CAN33_28475-T1 ID=CAN33_28475-T1|Name=CAN33_28475-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2223bp|location=Sequence derived from alignment at NKJJ01000008.1:180542..181388+ (Aspergillus niger FDAARGOS_311)
ATGATCACAACAGACGGACCGGAGATATCGGAAAATGCGCGACAGCTTGA
CATTTTGGCCACGATTGATAGCCTCAACCAACGCACTCAGCCATATCTGC
GTGACCGCCAGGAATGCAAAACCCTCCAACACAATCTGGAGCACCTGGCG
TTACGAATGCACATGTCTCTAGTTATTTCCGTCCTGACACGTCCAGCACT
GAAGCGCACTGTAATGCAAGACGCGTCCTATGACATCTTGCGCACCCGCG
CCAAATTGAGCCTGATCGACGCCTCTAGGGCCTTTTTGGATTTTCAGGCT
CTGAGTGTGGTACCCCTCCGAAGCTGGTCAATGGTGCACACGGTGCTTAG
TTCCACTTTACTTCTCTGCATTTGGGAGGAGACCCGAAACGATCCCGAGT
GTCGTGATTTACAGCAAAAGGTGATTGAGGTCTTTTCTGCCGCTGGCACA
GTGGGCACAGTGGAGAACACAGCATCGGAGAATGGGCAATGGCTATCGGA
ACGGCATATACGAGCGCTAATCACACTGCGCAATTCGGTCCGAACGGCAG
TCGAACGTGAAAAGGGGGAGGCAAGCGTTGGGACAGAACGCGCGGAGCAG
CCCCAGCCTTTTTTTCCTGTCTATGGTATGCCGAACGGGATCCCGGATGA
CTTCGGTCAAGACTTCTCACCAGCAAGCTATCTTGACTCCATTATGAACG
TACCCATGTTTGACTTATCCCAAGAGCTGGGTTTTCTTTGAATGATCACA
ACAGACGGACCGGAGATATCGGAAAATGCGCGACAGCTTGACATTTTGGC
CACGATTGATAGCCTCAACCAACGCACTCAGCCATATCTGCGTGACCGCC
AGGAATGCAAAACCCTCCAACACAATCTGGAGCACCTGGCGTTACGAATG
CACATGTCTCTAGTTATTTCCGTCCTGACACGTCCAGCACTGAAGCGCAC
TGTAATGCAAGACGCGTCCTATGACATCTTGCGCACCCGCGCCAAATTGA
GCCTGATCGACGCCTCTAGGGCCTTTTTGGATTTTCAGGCTCTGAGTGTG
GTACCCCTCCGAAGCTGGTCAATGGTGCACACGGTGCTTAGTTCCACTTT
ACTTCTCTGCATTTGGGAGGAGACCCGAAACGATCCCGAGTGTCGTGATT
TACAGCAAAAGGTGATTGAGGTCTTTTCTGCCGCTGGCACAGTGGGCACA
GTGGAGAACACAGCATCGGAGAATGGGCAATGGCTATCGGAACGGCATAT
ACGAGCGCTAATCACACTGCGCAATTCGGTCCGAACGGCAGTCGAACGTG
AAAAGGGGGAGGCAAGCGTTGGGACAGAACGCGCGGAGCAGCCCCAGCCT
TTTTTTCCTGTCTATGGTATGCCGAACGGGATCCCGGATGACTTCGGTCA
AGACTTCTCACCAGCAAGCTATCTTGACTCCATTATGAACGTACCCATGT
TTGACTTATCCCAAGAGCTGGGTTTTCTTTGAATGATCACAACAGACGGA
CCGGAGATATCGGAAAATGCGCGACAGCTTGACATTTTGGCCACGATTGA
TAGCCTCAACCAACGCACTCAGCCATATCTGCGTGACCGCCAGGAATGCA
AAACCCTCCAACACAATCTGGAGCACCTGGCGTTACGAATGCACATGTCT
CTAGTTATTTCCGTCCTGACACGTCCAGCACTGAAGCGCACTGTAATGCA
AGACGCGTCCTATGACATCTTGCGCACCCGCGCCAAATTGAGCCTGATCG
ACGCCTCTAGGGCCTTTTTGGATTTTCAGGCTCTGAGTGTGGTACCCCTC
CGAAGCTGGTCAATGGTGCACACGGTGCTTAGTTCCACTTTACTTCTCTG
CATTTGGGAGGAGACCCGAAACGATCCCGAGTGTCGTGATTTACAGCAAA
AGGTGATTGAGGTCTTTTCTGCCGCTGGCACAGTGGGCACAGTGGAGAAC
ACAGCATCGGAGAATGGGCAATGGCTATCGGAACGGCATATACGAGCGCT
AATCACACTGCGCAATTCGGTCCGAACGGCAGTCGAACGTGAAAAGGGGG
AGGCAAGCGTTGGGACAGAACGCGCGGAGCAGCCCCAGCCTTTTTTTCCT
GTCTATGGTATGCCGAACGGGATCCCGGATGACTTCGGTCAAGACTTCTC
ACCAGCAAGCTATCTTGACTCCATTATGAACGTACCCATGTTTGACTTAT
CCCAAGAGCTGGGTTTTCTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28475CAN33_28475Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28475-T1.exon1CAN33_28475-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_28475-T1.exon2CAN33_28475-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28475-T1.exon3CAN33_28475-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28475-T1.cdsCAN33_28475-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28475-T1CAN33_28475-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:180542..181388 +
Powered by Drupal