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CAN33_28675-T1, CAN33_28675-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28675-T1
Unique NameCAN33_28675-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:305676..306638-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28675-T1 ID=CAN33_28675-T1|Name=CAN33_28675-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=963bp|location=Sequence derived from alignment at NKJJ01000008.1:305676..306638- (Aspergillus niger FDAARGOS_311)
ATGTCTTCTTCATACGAGCTTTATCGCTACACCCCGTCCTTGGGGGCTGC
AATCCTCTTCTTAGTATTGTTCATATTCATAACAGCATACCATGTCTATC
AAATGGCCCAGGCGCGAGCCTGGTATTTTACCTGCTTTGTGCTGGGCGGA
ATTTGTTCGTGAAGCCACCTGCTGAATTCCCGGCTTATGCTGACTTAGTT
TATAGTCCAGATAATCGGATACATTACACGTGCGTTAGCGCATAGCAACA
CCCAAAGCGTAACCATATACGCTATACAAGATATCCTGATTCTACTCGCG
CCACCCCTCTACGCTGCGACAATCTACATGACCCTTGGGCGGCTTATTAC
TTTCCTCGACGCAGAAAGGCAGAGCCTTATCCCAATCAGGTGGCTTACAA
CAATCTTCGTTACCGGCGATGTACTATCTTTTCTTCTGCAGGGAGCTGGT
ATGATATACGCCTGATGAATATGCCTCTATTATACTAATATAGTGCTAGG
CGGCGGCATCATGGCCAGTGGCACTCTCAGCGGAATGACCACCGGTGAGA
ACGTTGTTATGGGCGGACTAGCTGTCCAGCTCATCTTCTTCAGTGTCTTT
GTGATTGTTGCGACGCTTTTCCACTTTCGTATCCATCAGAACCCTACAGA
AAAGTCGTTGTCTACGTGCATTGCGCGTAGTGGTTGGCGCAACCCAAATT
GGGAGACGACCATAGTAGGTTTATATATCGCCAGTATGCTTATCTTGATA
CGGTCGGTCTTTCGCATGATTGAGTATGCTGGTGGGAATGATGGGTATCT
TATGAGTCATGAGGCTTTTAGCTATGTCTTTGATGCGGTGTTGATGTTTT
TTGCGATGGTTGTGATTAGCGTGCTTCATCCGTCTAAGGTTCTGGGTTCG
GGCAAAGCGGGGGAGATGAATAAGAGGGAGAGTGTGCAGTTGCAGAGGTT
ATATTCTAGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000008.1:305676..306638-

>CAN33_28675-T1 ID=CAN33_28675-T1|Name=CAN33_28675-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2583bp|location=Sequence derived from alignment at NKJJ01000008.1:305676..306638- (Aspergillus niger FDAARGOS_311)
GCGGCGGCATCATGGCCAGTGGCACTCTCAGCGGAATGACCACCGGTGAG
AACGTTGTTATGGGCGGACTAGCTGTCCAGCTCATCTTCTTCAGTGTCTT
TGTGATTGTTGCGACGCTTTTCCACTTTCGTATCCATCAGAACCCTACAG
AAAAGTCGTTGTCTACGTGCATTGCGCGTAGTGGTTGGCGCAACCCAAAT
TGGGAGACGACCATAGTAGGTTTATATATCGCCAGTATGCTTATCTTGAT
ACGGTCGGTCTTTCGCATGATTGAGTATGCTGGTGGGAATGATGGGTATC
TTATGAGTCATGAGGCTTTTAGCTATGTCTTTGATGCGGTGTTGATGTTT
TTTGCGATGGTTGTGATTAGCGTGCTTCATCCGTCTAAGGTTCTGGGTTC
GGGCAAAGCGGGGGAGATGAATAAGAGGGAGAGTGTGCAGTTGCAGAGGT
TATATTCTAGGTGATCCAGATAATCGGATACATTACACGTGCGTTAGCGC
ATAGCAACACCCAAAGCGTAACCATATACGCTATACAAGATATCCTGATT
CTACTCGCGCCACCCCTCTACGCTGCGACAATCTACATGACCCTTGGGCG
GCTTATTACTTTCCTCGACGCAGAAAGGCAGAGCCTTATCCCAATCAGGT
GGCTTACAACAATCTTCGTTACCGGCGATGTACTATCTTTTCTTCTGCAG
GGAGCTGATGTCTTCTTCATACGAGCTTTATCGCTACACCCCGTCCTTGG
GGGCTGCAATCCTCTTCTTAGTATTGTTCATATTCATAACAGCATACCAT
GTCTATCAAATGGCCCAGGCGCGAGCCTGGTATTTTACCTGCTTTGTGCT
GGGCGGAATTTGCGGCGGCATCATGGCCAGTGGCACTCTCAGCGGAATGA
CCACCGGTGAGAACGTTGTTATGGGCGGACTAGCTGTCCAGCTCATCTTC
TTCAGTGTCTTTGTGATTGTTGCGACGCTTTTCCACTTTCGTATCCATCA
GAACCCTACAGAAAAGTCGTTGTCTACGTGCATTGCGCGTAGTGGTTGGC
GCAACCCAAATTGGGAGACGACCATAGTAGGTTTATATATCGCCAGTATG
CTTATCTTGATACGGTCGGTCTTTCGCATGATTGAGTATGCTGGTGGGAA
TGATGGGTATCTTATGAGTCATGAGGCTTTTAGCTATGTCTTTGATGCGG
TGTTGATGTTTTTTGCGATGGTTGTGATTAGCGTGCTTCATCCGTCTAAG
GTTCTGGGTTCGGGCAAAGCGGGGGAGATGAATAAGAGGGAGAGTGTGCA
GTTGCAGAGGTTATATTCTAGGTGATCCAGATAATCGGATACATTACACG
TGCGTTAGCGCATAGCAACACCCAAAGCGTAACCATATACGCTATACAAG
ATATCCTGATTCTACTCGCGCCACCCCTCTACGCTGCGACAATCTACATG
ACCCTTGGGCGGCTTATTACTTTCCTCGACGCAGAAAGGCAGAGCCTTAT
CCCAATCAGGTGGCTTACAACAATCTTCGTTACCGGCGATGTACTATCTT
TTCTTCTGCAGGGAGCTGATGTCTTCTTCATACGAGCTTTATCGCTACAC
CCCGTCCTTGGGGGCTGCAATCCTCTTCTTAGTATTGTTCATATTCATAA
CAGCATACCATGTCTATCAAATGGCCCAGGCGCGAGCCTGGTATTTTACC
TGCTTTGTGCTGGGCGGAATTTGCGGCGGCATCATGGCCAGTGGCACTCT
CAGCGGAATGACCACCGGTGAGAACGTTGTTATGGGCGGACTAGCTGTCC
AGCTCATCTTCTTCAGTGTCTTTGTGATTGTTGCGACGCTTTTCCACTTT
CGTATCCATCAGAACCCTACAGAAAAGTCGTTGTCTACGTGCATTGCGCG
TAGTGGTTGGCGCAACCCAAATTGGGAGACGACCATAGTAGGTTTATATA
TCGCCAGTATGCTTATCTTGATACGGTCGGTCTTTCGCATGATTGAGTAT
GCTGGTGGGAATGATGGGTATCTTATGAGTCATGAGGCTTTTAGCTATGT
CTTTGATGCGGTGTTGATGTTTTTTGCGATGGTTGTGATTAGCGTGCTTC
ATCCGTCTAAGGTTCTGGGTTCGGGCAAAGCGGGGGAGATGAATAAGAGG
GAGAGTGTGCAGTTGCAGAGGTTATATTCTAGGTGATCCAGATAATCGGA
TACATTACACGTGCGTTAGCGCATAGCAACACCCAAAGCGTAACCATATA
CGCTATACAAGATATCCTGATTCTACTCGCGCCACCCCTCTACGCTGCGA
CAATCTACATGACCCTTGGGCGGCTTATTACTTTCCTCGACGCAGAAAGG
CAGAGCCTTATCCCAATCAGGTGGCTTACAACAATCTTCGTTACCGGCGA
TGTACTATCTTTTCTTCTGCAGGGAGCTGATGTCTTCTTCATACGAGCTT
TATCGCTACACCCCGTCCTTGGGGGCTGCAATCCTCTTCTTAGTATTGTT
CATATTCATAACAGCATACCATGTCTATCAAATGGCCCAGGCGCGAGCCT
GGTATTTTACCTGCTTTGTGCTGGGCGGAATTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28675CAN33_28675Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28675-T1CAN33_28675-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28675-T1.cdsCAN33_28675-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28675-T1.exon3CAN33_28675-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_28675-T1.exon2CAN33_28675-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28675-T1.exon1CAN33_28675-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.2
NoteEggNog:ENOG41
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
ProductRTA1 like protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:305676..306638 -
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