You are here

Home

CAN33_28875-T1, CAN33_28875-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28875-T1
Unique NameCAN33_28875-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:431672..432812-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28875-T1 ID=CAN33_28875-T1|Name=CAN33_28875-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1141bp|location=Sequence derived from alignment at NKJJ01000008.1:431672..432812- (Aspergillus niger FDAARGOS_311)
ATGTCCATCCACCAAGCCGGCACCGCCGACGGCTGGCACGGCATCGTCCC
GAGTACCGCCTTCCCCGCCGAACCCGACCGCTACCACCTGTACATCGGAC
ACTTCTGCCCATTCGCCCACCGCGTCAACATCGTCCGACACCTCAAGGGC
CTCACCGACCTCATTAAAGTCAGCGTTGTGCGAGCATACCCGAAGGGAGA
TTTAAAGGGTTGGCCAGGATGGAAGTTCCCTGCTTCGGACGACGAGTACC
CCGGGGCAACGGTGGATCATCTTTACGGGGAGGATTACCTGCACAAGGTA
TATTTCCGGGCGGATCCAGAATATAAGGGCCGGTATTCGGTACCCTTGTT
GTGGGATACGAAGACGGGGACGGCGGTTTGTAATGTATGTATACTACCGA
CTCTAATCTCTGTGTTGATCGGAGGAATCTAGTAACTGATGCATGCTGGA
TGCGACGTATAGGAAAGTCTAGAAATGCTCCGCTGGCTCCCCAAAGCATT
CAACTCCCAGATCTCGCCGTCGCTGGCTGAGATTGACCTCTACCCTAGCC
ATCTCCAAGCAAAGATTGACGCCATCAGTCCGTGGATGCAATCGGATGTG
AACTCTGGGGTGTACAAGGCCGGATTTACAGACTCGCAGGAGGAATACAA
CGACAAGGTGGTTCGCGTATTCGGGGCGCTGAACAAGCTTGAGCGCATTA
TCGCGCAGAATGGAGGCCCGTTCGTGCTAGGAAAAGAGATCACAGAGTTG
GATGTGATGCTGTATACAACATTGATTCGATTCGACGTGGTGTATGTGGA
GCACTTCAAGTGTAATCTGGGGACCATCCGTCATGATTATCCGGTGCTGC
ATAACTGGTTGAAGGGGATGTATTGGGATGTGGAGGCTGCGAGAGATACT
ACAGATTTCAAGCATATCAAGGAGAATGTGAGTCATCCAATCACGTCCAG
AAGGTATGTGCTAATTGGACTAGTATACGAAGAGCCACTGGCACATCAAC
CCCAGGGCGATCACACCGCTGGGCCCGTATCCAGACATCGAGGAGGGGGT
GGAGAGGGATTGGACCAAGTTGCGTGTCGGAGGGGTGAAGCATCCAGCCG
TGTTGGAACATGAGGCCAGTATTCCCGATCTAAGTCAGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000008.1:431672..432812-

>CAN33_28875-T1 ID=CAN33_28875-T1|Name=CAN33_28875-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3051bp|location=Sequence derived from alignment at NKJJ01000008.1:431672..432812- (Aspergillus niger FDAARGOS_311)
TATACGAAGAGCCACTGGCACATCAACCCCAGGGCGATCACACCGCTGGG
CCCGTATCCAGACATCGAGGAGGGGGTGGAGAGGGATTGGACCAAGTTGC
GTGTCGGAGGGGTGAAGCATCCAGCCGTGTTGGAACATGAGGCCAGTATT
CCCGATCTAAGTCAGTAGGAAAGTCTAGAAATGCTCCGCTGGCTCCCCAA
AGCATTCAACTCCCAGATCTCGCCGTCGCTGGCTGAGATTGACCTCTACC
CTAGCCATCTCCAAGCAAAGATTGACGCCATCAGTCCGTGGATGCAATCG
GATGTGAACTCTGGGGTGTACAAGGCCGGATTTACAGACTCGCAGGAGGA
ATACAACGACAAGGTGGTTCGCGTATTCGGGGCGCTGAACAAGCTTGAGC
GCATTATCGCGCAGAATGGAGGCCCGTTCGTGCTAGGAAAAGAGATCACA
GAGTTGGATGTGATGCTGTATACAACATTGATTCGATTCGACGTGGTGTA
TGTGGAGCACTTCAAGTGTAATCTGGGGACCATCCGTCATGATTATCCGG
TGCTGCATAACTGGTTGAAGGGGATGTATTGGGATGTGGAGGCTGCGAGA
GATACTACAGATTTCAAGCATATCAAGGAGAATATGTCCATCCACCAAGC
CGGCACCGCCGACGGCTGGCACGGCATCGTCCCGAGTACCGCCTTCCCCG
CCGAACCCGACCGCTACCACCTGTACATCGGACACTTCTGCCCATTCGCC
CACCGCGTCAACATCGTCCGACACCTCAAGGGCCTCACCGACCTCATTAA
AGTCAGCGTTGTGCGAGCATACCCGAAGGGAGATTTAAAGGGTTGGCCAG
GATGGAAGTTCCCTGCTTCGGACGACGAGTACCCCGGGGCAACGGTGGAT
CATCTTTACGGGGAGGATTACCTGCACAAGGTATATTTCCGGGCGGATCC
AGAATATAAGGGCCGGTATTCGGTACCCTTGTTGTGGGATACGAAGACGG
GGACGGCGGTTTGTAATTATACGAAGAGCCACTGGCACATCAACCCCAGG
GCGATCACACCGCTGGGCCCGTATCCAGACATCGAGGAGGGGGTGGAGAG
GGATTGGACCAAGTTGCGTGTCGGAGGGGTGAAGCATCCAGCCGTGTTGG
AACATGAGGCCAGTATTCCCGATCTAAGTCAGTAGGAAAGTCTAGAAATG
CTCCGCTGGCTCCCCAAAGCATTCAACTCCCAGATCTCGCCGTCGCTGGC
TGAGATTGACCTCTACCCTAGCCATCTCCAAGCAAAGATTGACGCCATCA
GTCCGTGGATGCAATCGGATGTGAACTCTGGGGTGTACAAGGCCGGATTT
ACAGACTCGCAGGAGGAATACAACGACAAGGTGGTTCGCGTATTCGGGGC
GCTGAACAAGCTTGAGCGCATTATCGCGCAGAATGGAGGCCCGTTCGTGC
TAGGAAAAGAGATCACAGAGTTGGATGTGATGCTGTATACAACATTGATT
CGATTCGACGTGGTGTATGTGGAGCACTTCAAGTGTAATCTGGGGACCAT
CCGTCATGATTATCCGGTGCTGCATAACTGGTTGAAGGGGATGTATTGGG
ATGTGGAGGCTGCGAGAGATACTACAGATTTCAAGCATATCAAGGAGAAT
ATGTCCATCCACCAAGCCGGCACCGCCGACGGCTGGCACGGCATCGTCCC
GAGTACCGCCTTCCCCGCCGAACCCGACCGCTACCACCTGTACATCGGAC
ACTTCTGCCCATTCGCCCACCGCGTCAACATCGTCCGACACCTCAAGGGC
CTCACCGACCTCATTAAAGTCAGCGTTGTGCGAGCATACCCGAAGGGAGA
TTTAAAGGGTTGGCCAGGATGGAAGTTCCCTGCTTCGGACGACGAGTACC
CCGGGGCAACGGTGGATCATCTTTACGGGGAGGATTACCTGCACAAGGTA
TATTTCCGGGCGGATCCAGAATATAAGGGCCGGTATTCGGTACCCTTGTT
GTGGGATACGAAGACGGGGACGGCGGTTTGTAATTATACGAAGAGCCACT
GGCACATCAACCCCAGGGCGATCACACCGCTGGGCCCGTATCCAGACATC
GAGGAGGGGGTGGAGAGGGATTGGACCAAGTTGCGTGTCGGAGGGGTGAA
GCATCCAGCCGTGTTGGAACATGAGGCCAGTATTCCCGATCTAAGTCAGT
AGGAAAGTCTAGAAATGCTCCGCTGGCTCCCCAAAGCATTCAACTCCCAG
ATCTCGCCGTCGCTGGCTGAGATTGACCTCTACCCTAGCCATCTCCAAGC
AAAGATTGACGCCATCAGTCCGTGGATGCAATCGGATGTGAACTCTGGGG
TGTACAAGGCCGGATTTACAGACTCGCAGGAGGAATACAACGACAAGGTG
GTTCGCGTATTCGGGGCGCTGAACAAGCTTGAGCGCATTATCGCGCAGAA
TGGAGGCCCGTTCGTGCTAGGAAAAGAGATCACAGAGTTGGATGTGATGC
TGTATACAACATTGATTCGATTCGACGTGGTGTATGTGGAGCACTTCAAG
TGTAATCTGGGGACCATCCGTCATGATTATCCGGTGCTGCATAACTGGTT
GAAGGGGATGTATTGGGATGTGGAGGCTGCGAGAGATACTACAGATTTCA
AGCATATCAAGGAGAATATGTCCATCCACCAAGCCGGCACCGCCGACGGC
TGGCACGGCATCGTCCCGAGTACCGCCTTCCCCGCCGAACCCGACCGCTA
CCACCTGTACATCGGACACTTCTGCCCATTCGCCCACCGCGTCAACATCG
TCCGACACCTCAAGGGCCTCACCGACCTCATTAAAGTCAGCGTTGTGCGA
GCATACCCGAAGGGAGATTTAAAGGGTTGGCCAGGATGGAAGTTCCCTGC
TTCGGACGACGAGTACCCCGGGGCAACGGTGGATCATCTTTACGGGGAGG
ATTACCTGCACAAGGTATATTTCCGGGCGGATCCAGAATATAAGGGCCGG
TATTCGGTACCCTTGTTGTGGGATACGAAGACGGGGACGGCGGTTTGTAA
T
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004364glutathione transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28875CAN33_28875Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28875-T1CAN33_28875-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28875-T1.cdsCAN33_28875-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28875-T1.exon3CAN33_28875-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_28875-T1.exon2CAN33_28875-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28875-T1.exon1CAN33_28875-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.4
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR016639
DBxrefPFAM:PF13409
DBxrefPFAM:PF13410
ProductGlutathione S-transferase N-terminal domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:431672..432812 -
Powered by Drupal