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CAN33_28880-T1, CAN33_28880-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28880-T1
Unique NameCAN33_28880-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:433946..434742+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28880-T1 ID=CAN33_28880-T1|Name=CAN33_28880-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=797bp|location=Sequence derived from alignment at NKJJ01000008.1:433946..434742+ (Aspergillus niger FDAARGOS_311)
ATGAACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGTTCCTGC
GCTAGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCACCAAGA
ACAACATCATCACCACCGACGACTTCATCCTCTACAATAATCTCTGGGGC
GAGGACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTATGACAG
CGGCAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCGGCGACG
ACTATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCCAAGCAG
CTGAGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAGGTGAGCCAA
TCTTTCCTGTCACGAATGAAGCTATTGTCTAATAATCTTAGCTACACGGG
CAACGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCTCCACCACTG
ACTCCACAACCGCCACTCACGAATACGAAATCATGATCTGGCTCGCCGCC
TACGGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTATCGCCAGCCC
CACTATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCAACGACTGGA
CAGTGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTCTCGGCCGAC
GTCTTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGCGTCTCTTCCAG
CTTGTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGACTGGCTCTG
ATGCTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAATACTTAG
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Coding sequence (CDS) from alignment at NKJJ01000008.1:433946..434742+

>CAN33_28880-T1 ID=CAN33_28880-T1|Name=CAN33_28880-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1494bp|location=Sequence derived from alignment at NKJJ01000008.1:433946..434742+ (Aspergillus niger FDAARGOS_311)
ATGAACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGTTCCTGC
GCTAGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCACCAAGA
ACAACATCATCACCACCGACGACTTCATCCTCTACAATAATCTCTGGGGC
GAGGACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTATGACAG
CGGCAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCGGCGACG
ACTATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCCAAGCAG
CTGAGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAGCTACACGGG
CAACGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCTCCACCACTG
ACTCCACAACCGCCACTCACGAATACGAAATCATGATCTGGCTCGCCGCC
TACGGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTATCGCCAGCCC
CACTATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCAACGACTGGA
CAGTGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTCTCGGCCGAC
GTCTTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGCGTCTCTTCCAG
CTTGTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGACTGGCTCTG
ATGCTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAATACTTAGATG
AACCGGTACCTGTCTATCCCCCTGTGCTTGGCGAGCGCTGTTCCTGCGCT
AGCGGGTCTGGCGGCCCGCGACCCCATCGGTACCATCTGCACCAAGAACA
ACATCATCACCACCGACGACTTCATCCTCTACAATAATCTCTGGGGCGAG
GACTATGCCACTTCCGGCTCCGAGTGTACCTACCTCGACTATGACAGCGG
CAACTCCATCTCATGGCAGACGTCGTGGACCTGGGCTGGCGGCGACGACT
ATGTCAAGAGCTATCCCAATGCCGTCCTGAACGTCGGTGCCAAGCAGCTG
AGCACGATCACCAGTATTCCCTCGACCTGGAAATGGAGCTACACGGGCAA
CGACCTCGTCGCCGACGTCTCCTACGATGCCTTCCTCTCCACCACTGACT
CCACAACCGCCACTCACGAATACGAAATCATGATCTGGCTCGCCGCCTAC
GGTGGCATTGAGCCCATCGGCAACTCGGACGGTCCTATCGCCAGCCCCAC
TATCGGTGGCTACACCTGGGATCTCTACAAGGGTCCCAACGACTGGACAG
TGTATAGTTTCGTGGCCCGCGAGACTATCACGGACTTCTCGGCCGACGTC
TTGGAGTTCTTTACTTATTTGGTTGATAACGAGGGCGTCTCTTCCAGCTT
GTATTTGCAGACCCTGGGTGCGGGCACTGAACCGAAGACTGGCTCTGATG
CTTGGTTCACGGTTTCGCCGTATACTGTTAGCATCAATACTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008810cellulase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28880CAN33_28880Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28880-T1.exon1CAN33_28880-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_28880-T1.exon2CAN33_28880-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28880-T1.cdsCAN33_28880-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28880-T1CAN33_28880-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.4
NoteSECRETED:SignalP(1-22)
NoteCAZy:GH12
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR002594
DBxrefInterPro:IPR013319
DBxrefPFAM:PF01670
ProductGlycosyl hydrolase family 12 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:433946..434742 +
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