You are here

Home

CAN33_28945-T1, CAN33_28945-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28945-T1
Unique NameCAN33_28945-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:475798..477541+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28945-T1 ID=CAN33_28945-T1|Name=CAN33_28945-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1744bp|location=Sequence derived from alignment at NKJJ01000008.1:475798..477541+ (Aspergillus niger FDAARGOS_311)
ATGCCCACGCGCGCAGAGTTGGCAACCCAGGCTTGTGACATCTGCCGGAA
GCGCAAGGTCAAATGCAATGTGACTTCGTCATCGACCGATGTCCCTTCCA
GATGTGGGCGCTGCGCTAGACTGGACCTGCCATGCACCTTTCTGTCTCCA
TCCCGGACGCGAGGCCCGAAGAAACGGTACGTTGCTCGGTTCTGATTTGG
CAGTGAGTGGTGTCAATTGCTAACGCACACTCCAAGCTCACGTACAGGAT
CTCCGGCACAAGAACAGCCAGATTGGGGGACGGGGAGCAGCCGGGCTTCG
GGTGCCGTCAATTATCCCACGGATGATGTATGCGATCGGCGCATGTTTTC
CTGCATCATGCAGGACTATTTGGACTACCTGTACCCCTTGATTCCAATCG
TACATCGTCCGTCTTTCCAACAGTCCTTGCAGCAGGACCGGGATCGTGAG
GACAGCGGATTCCTCGGGCTCGTCACCGCCATCGCTGCGGTGGTTATCGC
CACTATGCCTAGCAGATTTCATTTCTATCGATCTGCGACCCCGCCCTTGA
GATTTACCTCGCGCAGGGACATGGTCCGTCACTGCTATGACAAAATCCTG
CGGCTGAGGGACTCTACCTACTTTGACCACATCAACTTCCAGAAGTTTGC
CATCTCATACTTGCTGTATGCTGCCTTTCGGCAGTTGGGTGATCATAACT
GGTCCCGCATGCTAGATGTGGAGGCGACACAAATTGCTCGCTTGCTAAAT
CTTCATCGAATCTCTGAATACGATGGACTTAACTGCATTGAGACTCAACT
GCGGAAAAAGGGCTTCTGGTTGATCTTCTACGGATTTGTGTAAGTGTGCA
TCACCCGGAGCGTAGCCGTCAGTCTCGCTCATTCAATCCAGTCATAATCA
ATTGCAGAATGTGCTAGGAGAGCGGTTGTCGTATCTTGACCCCATCCTTC
TCCATTCCATTAACCCGGAAGATCTCATGCCACTCGAAGTCGATGACGAA
ATGATCTTCGAGAACGAGGTGCTCATGCCACCGTCCCATACTCCATGCCT
GGTAACGGGGTTTATCCTCCATTCCAGGGTTTTCTGGGCTGCGATTAGGA
GCACCTGTCCAGAATCACCGGCTGAGCCGTGCCCCTGTGTGAGGGCCCGC
GATGCAGCCGTGCAGGTTGCTTACATCCAGGATCGTCTTCATAGTCTACG
GTTCTTACTGGAGGATATCCCTCCTCTCCTCCGGCCATGGCAGCCACCGG
ATAGCCAGGCTATCGCCCATGAAGGTGGCAGCACTGGTGTGACGGAGATG
ACGCAGTCACACTTTGCTTCTATGCGAGCAAATTTACACGTCACGCACCT
GTGGCTACAAAGCTTGCTTGTTGATCAGTTGGAGGCGGCGCAGGCGCACA
AATCAGAGCCGTCACTAGTTTCTACCAACCACGTACAACCCATGGTTGAC
GCAAAAGCGTTGTGGCTCCAGAGGGAGGGCCTTTGTCGTCAACTATTCTG
CATCCTATACAGCCTGCCCCAGATCAATCTGGAAGCGAACGGTCTACATT
TGGCGTACAAAGTGCGTGATATTGCGGCGGGCCTGCTGGTATGCCCATTT
CATGCCGCCGGCCCGGAAGCGGAGCGAGCAACCGAGTATCTACGACAATC
GACCGACATCTTGTCCCGCCTGGACAGCAGCGAAGGCATGGTCACGATGC
ATCTGCAGACTTGGATAGATACAGATCGAATAAAAAGTAGTTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000008.1:475798..477541+

>CAN33_28945-T1 ID=CAN33_28945-T1|Name=CAN33_28945-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4896bp|location=Sequence derived from alignment at NKJJ01000008.1:475798..477541+ (Aspergillus niger FDAARGOS_311)
ATGCCCACGCGCGCAGAGTTGGCAACCCAGGCTTGTGACATCTGCCGGAA
GCGCAAGGTCAAATGCAATGTGACTTCGTCATCGACCGATGTCCCTTCCA
GATGTGGGCGCTGCGCTAGACTGGACCTGCCATGCACCTTTCTGTCTCCA
TCCCGGACGCGAGGCCCGAAGAAACGCTCACGTACAGGATCTCCGGCACA
AGAACAGCCAGATTGGGGGACGGGGAGCAGCCGGGCTTCGGGTGCCGTCA
ATTATCCCACGGATGATGTATGCGATCGGCGCATGTTTTCCTGCATCATG
CAGGACTATTTGGACTACCTGTACCCCTTGATTCCAATCGTACATCGTCC
GTCTTTCCAACAGTCCTTGCAGCAGGACCGGGATCGTGAGGACAGCGGAT
TCCTCGGGCTCGTCACCGCCATCGCTGCGGTGGTTATCGCCACTATGCCT
AGCAGATTTCATTTCTATCGATCTGCGACCCCGCCCTTGAGATTTACCTC
GCGCAGGGACATGGTCCGTCACTGCTATGACAAAATCCTGCGGCTGAGGG
ACTCTACCTACTTTGACCACATCAACTTCCAGAAGTTTGCCATCTCATAC
TTGCTGTATGCTGCCTTTCGGCAGTTGGGTGATCATAACTGGTCCCGCAT
GCTAGATGTGGAGGCGACACAAATTGCTCGCTTGCTAAATCTTCATCGAA
TCTCTGAATACGATGGACTTAACTGCATTGAGACTCAACTGCGGAAAAAG
GGCTTCTGGTTGATCTTCTACGGATTTGTTCATAATCAATTGCAGAATGT
GCTAGGAGAGCGGTTGTCGTATCTTGACCCCATCCTTCTCCATTCCATTA
ACCCGGAAGATCTCATGCCACTCGAAGTCGATGACGAAATGATCTTCGAG
AACGAGGTGCTCATGCCACCGTCCCATACTCCATGCCTGGTAACGGGGTT
TATCCTCCATTCCAGGGTTTTCTGGGCTGCGATTAGGAGCACCTGTCCAG
AATCACCGGCTGAGCCGTGCCCCTGTGTGAGGGCCCGCGATGCAGCCGTG
CAGGTTGCTTACATCCAGGATCGTCTTCATAGTCTACGGTTCTTACTGGA
GGATATCCCTCCTCTCCTCCGGCCATGGCAGCCACCGGATAGCCAGGCTA
TCGCCCATGAAGGTGGCAGCACTGGTGTGACGGAGATGACGCAGTCACAC
TTTGCTTCTATGCGAGCAAATTTACACGTCACGCACCTGTGGCTACAAAG
CTTGCTTGTTGATCAGTTGGAGGCGGCGCAGGCGCACAAATCAGAGCCGT
CACTAGTTTCTACCAACCACGTACAACCCATGGTTGACGCAAAAGCGTTG
TGGCTCCAGAGGGAGGGCCTTTGTCGTCAACTATTCTGCATCCTATACAG
CCTGCCCCAGATCAATCTGGAAGCGAACGGTCTACATTTGGCGTACAAAG
TGCGTGATATTGCGGCGGGCCTGCTGGTATGCCCATTTCATGCCGCCGGC
CCGGAAGCGGAGCGAGCAACCGAGTATCTACGACAATCGACCGACATCTT
GTCCCGCCTGGACAGCAGCGAAGGCATGGTCACGATGCATCTGCAGACTT
GGATAGATACAGATCGAATAAAAAGTAGTTAAATGCCCACGCGCGCAGAG
TTGGCAACCCAGGCTTGTGACATCTGCCGGAAGCGCAAGGTCAAATGCAA
TGTGACTTCGTCATCGACCGATGTCCCTTCCAGATGTGGGCGCTGCGCTA
GACTGGACCTGCCATGCACCTTTCTGTCTCCATCCCGGACGCGAGGCCCG
AAGAAACGCTCACGTACAGGATCTCCGGCACAAGAACAGCCAGATTGGGG
GACGGGGAGCAGCCGGGCTTCGGGTGCCGTCAATTATCCCACGGATGATG
TATGCGATCGGCGCATGTTTTCCTGCATCATGCAGGACTATTTGGACTAC
CTGTACCCCTTGATTCCAATCGTACATCGTCCGTCTTTCCAACAGTCCTT
GCAGCAGGACCGGGATCGTGAGGACAGCGGATTCCTCGGGCTCGTCACCG
CCATCGCTGCGGTGGTTATCGCCACTATGCCTAGCAGATTTCATTTCTAT
CGATCTGCGACCCCGCCCTTGAGATTTACCTCGCGCAGGGACATGGTCCG
TCACTGCTATGACAAAATCCTGCGGCTGAGGGACTCTACCTACTTTGACC
ACATCAACTTCCAGAAGTTTGCCATCTCATACTTGCTGTATGCTGCCTTT
CGGCAGTTGGGTGATCATAACTGGTCCCGCATGCTAGATGTGGAGGCGAC
ACAAATTGCTCGCTTGCTAAATCTTCATCGAATCTCTGAATACGATGGAC
TTAACTGCATTGAGACTCAACTGCGGAAAAAGGGCTTCTGGTTGATCTTC
TACGGATTTGTTCATAATCAATTGCAGAATGTGCTAGGAGAGCGGTTGTC
GTATCTTGACCCCATCCTTCTCCATTCCATTAACCCGGAAGATCTCATGC
CACTCGAAGTCGATGACGAAATGATCTTCGAGAACGAGGTGCTCATGCCA
CCGTCCCATACTCCATGCCTGGTAACGGGGTTTATCCTCCATTCCAGGGT
TTTCTGGGCTGCGATTAGGAGCACCTGTCCAGAATCACCGGCTGAGCCGT
GCCCCTGTGTGAGGGCCCGCGATGCAGCCGTGCAGGTTGCTTACATCCAG
GATCGTCTTCATAGTCTACGGTTCTTACTGGAGGATATCCCTCCTCTCCT
CCGGCCATGGCAGCCACCGGATAGCCAGGCTATCGCCCATGAAGGTGGCA
GCACTGGTGTGACGGAGATGACGCAGTCACACTTTGCTTCTATGCGAGCA
AATTTACACGTCACGCACCTGTGGCTACAAAGCTTGCTTGTTGATCAGTT
GGAGGCGGCGCAGGCGCACAAATCAGAGCCGTCACTAGTTTCTACCAACC
ACGTACAACCCATGGTTGACGCAAAAGCGTTGTGGCTCCAGAGGGAGGGC
CTTTGTCGTCAACTATTCTGCATCCTATACAGCCTGCCCCAGATCAATCT
GGAAGCGAACGGTCTACATTTGGCGTACAAAGTGCGTGATATTGCGGCGG
GCCTGCTGGTATGCCCATTTCATGCCGCCGGCCCGGAAGCGGAGCGAGCA
ACCGAGTATCTACGACAATCGACCGACATCTTGTCCCGCCTGGACAGCAG
CGAAGGCATGGTCACGATGCATCTGCAGACTTGGATAGATACAGATCGAA
TAAAAAGTAGTTAAATGCCCACGCGCGCAGAGTTGGCAACCCAGGCTTGT
GACATCTGCCGGAAGCGCAAGGTCAAATGCAATGTGACTTCGTCATCGAC
CGATGTCCCTTCCAGATGTGGGCGCTGCGCTAGACTGGACCTGCCATGCA
CCTTTCTGTCTCCATCCCGGACGCGAGGCCCGAAGAAACGCTCACGTACA
GGATCTCCGGCACAAGAACAGCCAGATTGGGGGACGGGGAGCAGCCGGGC
TTCGGGTGCCGTCAATTATCCCACGGATGATGTATGCGATCGGCGCATGT
TTTCCTGCATCATGCAGGACTATTTGGACTACCTGTACCCCTTGATTCCA
ATCGTACATCGTCCGTCTTTCCAACAGTCCTTGCAGCAGGACCGGGATCG
TGAGGACAGCGGATTCCTCGGGCTCGTCACCGCCATCGCTGCGGTGGTTA
TCGCCACTATGCCTAGCAGATTTCATTTCTATCGATCTGCGACCCCGCCC
TTGAGATTTACCTCGCGCAGGGACATGGTCCGTCACTGCTATGACAAAAT
CCTGCGGCTGAGGGACTCTACCTACTTTGACCACATCAACTTCCAGAAGT
TTGCCATCTCATACTTGCTGTATGCTGCCTTTCGGCAGTTGGGTGATCAT
AACTGGTCCCGCATGCTAGATGTGGAGGCGACACAAATTGCTCGCTTGCT
AAATCTTCATCGAATCTCTGAATACGATGGACTTAACTGCATTGAGACTC
AACTGCGGAAAAAGGGCTTCTGGTTGATCTTCTACGGATTTGTTCATAAT
CAATTGCAGAATGTGCTAGGAGAGCGGTTGTCGTATCTTGACCCCATCCT
TCTCCATTCCATTAACCCGGAAGATCTCATGCCACTCGAAGTCGATGACG
AAATGATCTTCGAGAACGAGGTGCTCATGCCACCGTCCCATACTCCATGC
CTGGTAACGGGGTTTATCCTCCATTCCAGGGTTTTCTGGGCTGCGATTAG
GAGCACCTGTCCAGAATCACCGGCTGAGCCGTGCCCCTGTGTGAGGGCCC
GCGATGCAGCCGTGCAGGTTGCTTACATCCAGGATCGTCTTCATAGTCTA
CGGTTCTTACTGGAGGATATCCCTCCTCTCCTCCGGCCATGGCAGCCACC
GGATAGCCAGGCTATCGCCCATGAAGGTGGCAGCACTGGTGTGACGGAGA
TGACGCAGTCACACTTTGCTTCTATGCGAGCAAATTTACACGTCACGCAC
CTGTGGCTACAAAGCTTGCTTGTTGATCAGTTGGAGGCGGCGCAGGCGCA
CAAATCAGAGCCGTCACTAGTTTCTACCAACCACGTACAACCCATGGTTG
ACGCAAAAGCGTTGTGGCTCCAGAGGGAGGGCCTTTGTCGTCAACTATTC
TGCATCCTATACAGCCTGCCCCAGATCAATCTGGAAGCGAACGGTCTACA
TTTGGCGTACAAAGTGCGTGATATTGCGGCGGGCCTGCTGGTATGCCCAT
TTCATGCCGCCGGCCCGGAAGCGGAGCGAGCAACCGAGTATCTACGACAA
TCGACCGACATCTTGTCCCGCCTGGACAGCAGCGAAGGCATGGTCACGAT
GCATCTGCAGACTTGGATAGATACAGATCGAATAAAAAGTAGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28945CAN33_28945Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28945-T1.exon1CAN33_28945-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_28945-T1.exon2CAN33_28945-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28945-T1.exon3CAN33_28945-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28945-T1.cdsCAN33_28945-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28945-T1CAN33_28945-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.4
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
ProductFungal Zn(2)-Cys(6) binuclear cluster domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:475798..477541 +
Powered by Drupal