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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000008.1:517691..518822- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_29020-T1 ID=CAN33_29020-T1|Name=CAN33_29020-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1132bp|location=Sequence derived from alignment at NKJJ01000008.1:517691..518822- (Aspergillus niger FDAARGOS_311)
ATGCCCAAACCTAGAGTCCTCCATATCGGCGACCCGATCAAATACAACCA
CGACGTGTACGCGCGCTTTGCTTCACAATTCGACATCATCCGACCCAGCA
CCGAAGAACGAGCCCGTGATGCCTTCAAACAAGCCCTCCAGGAGCGCCGC
TGGGGCGACTTTGACGCCATCTTTCGTCCCTTTTGGAACACGGGCGGCGA
AATGGGCCGCTGGGACGAAGAACTGATCTCGTTGCTGCCTTCCTCCGTCA
AGATTGTTGCCTCGGCAGGCGCAGGCTACGACTGGGCAGATGTAGACGTC
TTTGCTAAATATGGTACATCCATCTGCCTTCTCCTTTCCATCCTCATTCT
TTCCTCCCTCTGCCTCAGCGGAATACTCATACAAGTTGGTGACATGAACA
GGAATCCTCTACTGCAACGGCGCCGCGGCCTCCTCGGAATCCGTCGCCGA
CATGGCCCTACTCCTCATCCTCAGCGTATTCCGTAACCTGCGGTGGTCAC
ATAGCGCCGCGCACAGCATCAACGCTACGCAATTCCTCGACGCGCATACG
AACTCGCCCCTCACGGCGCGGAATCCCAGTACACAGGTGCTTGGTATCAT
CGGGCTAGGGCAGATCGGGTACACGATTGCGCGGAAAGTGCACGCTGCGT
TTGGGATGAAGATTCTCTATCATGATATTATCCGGAAGGATCGCGGGGTG
GAGGAGAAGGTTGGGGCAGAGTACGTGGGTAAGTTGGAGGAGATGTTGGG
GAAGGTGGATTGTGTGGTTGTGGCGACGCCGTTCGCGGGACGGGTGTTGA
TGGATAGGGAGATGTTCGGAAAGATGAAGCAGGGGAGTCGGTTTGTGAAT
GTTGCCAGGGGAGGACTTGTGGATGAGGAGGCGTTGGTAGAGGCTGTTGA
GAGTGGGAGGTTGAGTGGGGTGGGGATGGATGTGCATGCTAATGAGCCGT
ATGTGCATCCGAGGTTGGCGGGTAATGCGAGGGTTATGATGATGAGCCAT
AATGCGGGAGGCACGGTGGATACGCACATTGGGTTTGAGAGGTTGGCGAT
GGAGAACATCGAGGGGTTTTTGGTGAAGGGGAGGGCGTTGACGCCGGTGA
ATGCGCATTTGTTCAAGCAGAGTAAGTTGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000008.1:517691..518822- >CAN33_29020-T1 ID=CAN33_29020-T1|Name=CAN33_29020-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2088bp|location=Sequence derived from alignment at NKJJ01000008.1:517691..518822- (Aspergillus niger FDAARGOS_311)
GAATCCTCTACTGCAACGGCGCCGCGGCCTCCTCGGAATCCGTCGCCGAC
ATGGCCCTACTCCTCATCCTCAGCGTATTCCGTAACCTGCGGTGGTCACA
TAGCGCCGCGCACAGCATCAACGCTACGCAATTCCTCGACGCGCATACGA
ACTCGCCCCTCACGGCGCGGAATCCCAGTACACAGGTGCTTGGTATCATC
GGGCTAGGGCAGATCGGGTACACGATTGCGCGGAAAGTGCACGCTGCGTT
TGGGATGAAGATTCTCTATCATGATATTATCCGGAAGGATCGCGGGGTGG
AGGAGAAGGTTGGGGCAGAGTACGTGGGTAAGTTGGAGGAGATGTTGGGG
AAGGTGGATTGTGTGGTTGTGGCGACGCCGTTCGCGGGACGGGTGTTGAT
GGATAGGGAGATGTTCGGAAAGATGAAGCAGGGGAGTCGGTTTGTGAATG
TTGCCAGGGGAGGACTTGTGGATGAGGAGGCGTTGGTAGAGGCTGTTGAG
AGTGGGAGGTTGAGTGGGGTGGGGATGGATGTGCATGCTAATGAGCCGTA
TGTGCATCCGAGGTTGGCGGGTAATGCGAGGGTTATGATGATGAGCCATA
ATGCGGGAGGCACGGTGGATACGCACATTGGGTTTGAGAGGTTGGCGATG
GAGAACATCGAGGGGTTTTTGGTGAAGGGGAGGGCGTTGACGCCGGTGAA
TGCGCATTTGTTCAAGCAGAGTAAGTTGTAAATGCCCAAACCTAGAGTCC
TCCATATCGGCGACCCGATCAAATACAACCACGACGTGTACGCGCGCTTT
GCTTCACAATTCGACATCATCCGACCCAGCACCGAAGAACGAGCCCGTGA
TGCCTTCAAACAAGCCCTCCAGGAGCGCCGCTGGGGCGACTTTGACGCCA
TCTTTCGTCCCTTTTGGAACACGGGCGGCGAAATGGGCCGCTGGGACGAA
GAACTGATCTCGTTGCTGCCTTCCTCCGTCAAGATTGTTGCCTCGGCAGG
CGCAGGCTACGACTGGGCAGATGTAGACGTCTTTGCTAAATATGGAATCC
TCTACTGCAACGGCGCCGCGGCCTCCTCGGAATCCGTCGCCGACATGGCC
CTACTCCTCATCCTCAGCGTATTCCGTAACCTGCGGTGGTCACATAGCGC
CGCGCACAGCATCAACGCTACGCAATTCCTCGACGCGCATACGAACTCGC
CCCTCACGGCGCGGAATCCCAGTACACAGGTGCTTGGTATCATCGGGCTA
GGGCAGATCGGGTACACGATTGCGCGGAAAGTGCACGCTGCGTTTGGGAT
GAAGATTCTCTATCATGATATTATCCGGAAGGATCGCGGGGTGGAGGAGA
AGGTTGGGGCAGAGTACGTGGGTAAGTTGGAGGAGATGTTGGGGAAGGTG
GATTGTGTGGTTGTGGCGACGCCGTTCGCGGGACGGGTGTTGATGGATAG
GGAGATGTTCGGAAAGATGAAGCAGGGGAGTCGGTTTGTGAATGTTGCCA
GGGGAGGACTTGTGGATGAGGAGGCGTTGGTAGAGGCTGTTGAGAGTGGG
AGGTTGAGTGGGGTGGGGATGGATGTGCATGCTAATGAGCCGTATGTGCA
TCCGAGGTTGGCGGGTAATGCGAGGGTTATGATGATGAGCCATAATGCGG
GAGGCACGGTGGATACGCACATTGGGTTTGAGAGGTTGGCGATGGAGAAC
ATCGAGGGGTTTTTGGTGAAGGGGAGGGCGTTGACGCCGGTGAATGCGCA
TTTGTTCAAGCAGAGTAAGTTGTAAATGCCCAAACCTAGAGTCCTCCATA
TCGGCGACCCGATCAAATACAACCACGACGTGTACGCGCGCTTTGCTTCA
CAATTCGACATCATCCGACCCAGCACCGAAGAACGAGCCCGTGATGCCTT
CAAACAAGCCCTCCAGGAGCGCCGCTGGGGCGACTTTGACGCCATCTTTC
GTCCCTTTTGGAACACGGGCGGCGAAATGGGCCGCTGGGACGAAGAACTG
ATCTCGTTGCTGCCTTCCTCCGTCAAGATTGTTGCCTCGGCAGGCGCAGG
CTACGACTGGGCAGATGTAGACGTCTTTGCTAAATATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| GO:0051287 | NAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000081.5 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1072:dehydrogenase |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR029753 |
| DBxref | InterPro:IPR029752 |
| DBxref | InterPro:IPR006139 |
| DBxref | InterPro:IPR006140 |
| DBxref | PFAM:PF02826 |
| DBxref | PFAM:PF00389 |
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000008.1 | supercontig | NKJJ01000008.1:517691..518822 - |
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