You are here

Home

CAN33_2905-T1, CAN33_2905-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2905-T1
Unique NameCAN33_2905-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1810864..1812462+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2905-T1 ID=CAN33_2905-T1|Name=CAN33_2905-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1599bp|location=Sequence derived from alignment at NKJJ01000004.1:1810864..1812462+ (Aspergillus niger FDAARGOS_311)
ATGACCAAGATATTGACCTCCAGCCAAGCTGAGGAACTGTGAGTATATTT
ATGCCATGGCCTGCCGTACCTTGCTTGCGCGCTTATACGCAACCCAGGCA
TAAGTCGATAATCGCCTACCTCTCATCAATAAATGCCTCGCGGAGTTGTG
AAGTGCTGCGGGAGGAACTCCAGGTGGACAGTAGTTTCGACGATGCGCTG
TGCCGGAAATATGAGGGGCTATTAGAGAAGAAATGGACCGGAATTGCTCG
GCTGCAGAAAAAGGTAGGTACATGTGCTTGACAGGGTCGGTCGTTTGGAG
TTGTTCTTTCCTCGTCGCTGGAGAACTCAGTAACTAATCACCGTGTAGAT
CTTGGACTTAGAATCTAAACTCGCTGGGCTCCAAACCGAGCTTGACACTA
TATCACCTACAGCCCGTTCCACCGGGAAGGACCCGATAAACTGGCTTCCT
ACTTCTTCCCGACACACATTCGAGTCGCACCGAGATGCTGTCACATGCGT
CGCATTCCATCCTGTCTTCACCTCTCTCGCCTCCGGTTCCGAGGACTGCA
CAATCAAAATATGGGATTGGGAACTCGGCGAACTAGAGCGGACACTCAAG
GGCCATATGAGGCCGGTCTCCGATCTCGATTTTGGCGGTCAGAAAGGACA
TACCATACTAGCATCATGTTCGAGTGATCTCCAGATCAAACTGTGGGACC
CGAACAAGGATTATGCCAATGTTCGGACTCTTTCTGGGCATGACCATTCA
GTTTCGGCTGTGCGCTTTTTGCGACAGACAGATAACATTCTTATTTCGGC
CAGTCGGGATGCGACAATTCGGATATGGGATGTGTCAACCGGATACTGTG
TCAAGGTGATCGACTCGCAGGGCTCCTGGATCAACGACGTATCGCCTTCT
TTCGATGGAAAGTGGCTGGTCACAGGAGGCCGTGATCAAGCCGCGATGGT
TTGGGAAGTCGCATCAGCCAAATCGGTTGCGTCATTAATAGGCCACGAGA
ATTTCATCGAGTGCTGCGTATTTGCGCCTCCCTCAAGCTATAAGCACTTG
GCCGCTATTGCGGGACTAAAGACAGCACCACCTGCGAGTAGCTCCTCCGA
ATTCATTGCGACGGGAGCTCGTGACAAGACGATCAAGCTCTGGGAATCCC
GGGGCCGATTGATCAAGACATTAGTTGGGCACGACAACTGGGTACGAGGC
CTATTATTCCATCCTGGTGGGAAATATTTAATCAGTGTGGCGGACGACAA
AACAATACGTTGCTGGGATCTGTCTCAAGGAGGAAGATTGGTGAAGACGA
TCAACGCCCACGGGCATTTTGTTAGTTGCATTCGTTGGGGCCCAGTACCT
GTGAGCGATGTTCCAGTGGAGACTTCTGAATCGACTAAAAGTTCCAAGTC
GGACTCTGTCAAGCCTGGGTTTCAATGCGTCATTGCAACAGGGAGCGCCG
ATTCAAGTGTACGGATTTTCACGTAGTTTCAGAGGTAAATGATTGCATAT
ATCCTAACCTTTTCAAAGACTAATACCAATACGAAGACTCAGATTCATGA
AGCTCCCTCCTCCCATCCGCAAGACACATACACACTCACACCCTTGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:1810864..1812462+

>CAN33_2905-T1 ID=CAN33_2905-T1|Name=CAN33_2905-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5580bp|location=Sequence derived from alignment at NKJJ01000004.1:1810864..1812462+ (Aspergillus niger FDAARGOS_311)
ATGACCAAGATATTGACCTCCAGCCAAGCTGAGGAACTGCATAAGTCGAT
AATCGCCTACCTCTCATCAATAAATGCCTCGCGGAGTTGTGAAGTGCTGC
GGGAGGAACTCCAGGTGGACAGTAGTTTCGACGATGCGCTGTGCCGGAAA
TATGAGGGGCTATTAGAGAAGAAATGGACCGGAATTGCTCGGCTGCAGAA
AAAGATCTTGGACTTAGAATCTAAACTCGCTGGGCTCCAAACCGAGCTTG
ACACTATATCACCTACAGCCCGTTCCACCGGGAAGGACCCGATAAACTGG
CTTCCTACTTCTTCCCGACACACATTCGAGTCGCACCGAGATGCTGTCAC
ATGCGTCGCATTCCATCCTGTCTTCACCTCTCTCGCCTCCGGTTCCGAGG
ACTGCACAATCAAAATATGGGATTGGGAACTCGGCGAACTAGAGCGGACA
CTCAAGGGCCATATGAGGCCGGTCTCCGATCTCGATTTTGGCGGTCAGAA
AGGACATACCATACTAGCATCATGTTCGAGTGATCTCCAGATCAAACTGT
GGGACCCGAACAAGGATTATGCCAATGTTCGGACTCTTTCTGGGCATGAC
CATTCAGTTTCGGCTGTGCGCTTTTTGCGACAGACAGATAACATTCTTAT
TTCGGCCAGTCGGGATGCGACAATTCGGATATGGGATGTGTCAACCGGAT
ACTGTGTCAAGGTGATCGACTCGCAGGGCTCCTGGATCAACGACGTATCG
CCTTCTTTCGATGGAAAGTGGCTGGTCACAGGAGGCCGTGATCAAGCCGC
GATGGTTTGGGAAGTCGCATCAGCCAAATCGGTTGCGTCATTAATAGGCC
ACGAGAATTTCATCGAGTGCTGCGTATTTGCGCCTCCCTCAAGCTATAAG
CACTTGGCCGCTATTGCGGGACTAAAGACAGCACCACCTGCGAGTAGCTC
CTCCGAATTCATTGCGACGGGAGCTCGTGACAAGACGATCAAGCTCTGGG
AATCCCGGGGCCGATTGATCAAGACATTAGTTGGGCACGACAACTGGGTA
CGAGGCCTATTATTCCATCCTGGTGGGAAATATTTAATCAGTGTGGCGGA
CGACAAAACAATACGTTGCTGGGATCTGTCTCAAGGAGGAAGATTGGTGA
AGACGATCAACGCCCACGGGCATTTTGTTAGTTGCATTCGTTGGGGCCCA
GTACCTGTGAGCGATGTTCCAGTGGAGACTTCTGAATCGACTAAAAGTTC
CAAGTCGGACTCTGTCAAGCCTGGGTTTCAATGCGTCATTGCAACAGGGA
GCGCCGATTCAAGTACTAATACCAATACGAAGACTCAGATTCATGAAGCT
CCCTCCTCCCATCCGCAAGACACATACACACTCACACCCTTGTAAATGAC
CAAGATATTGACCTCCAGCCAAGCTGAGGAACTGCATAAGTCGATAATCG
CCTACCTCTCATCAATAAATGCCTCGCGGAGTTGTGAAGTGCTGCGGGAG
GAACTCCAGGTGGACAGTAGTTTCGACGATGCGCTGTGCCGGAAATATGA
GGGGCTATTAGAGAAGAAATGGACCGGAATTGCTCGGCTGCAGAAAAAGA
TCTTGGACTTAGAATCTAAACTCGCTGGGCTCCAAACCGAGCTTGACACT
ATATCACCTACAGCCCGTTCCACCGGGAAGGACCCGATAAACTGGCTTCC
TACTTCTTCCCGACACACATTCGAGTCGCACCGAGATGCTGTCACATGCG
TCGCATTCCATCCTGTCTTCACCTCTCTCGCCTCCGGTTCCGAGGACTGC
ACAATCAAAATATGGGATTGGGAACTCGGCGAACTAGAGCGGACACTCAA
GGGCCATATGAGGCCGGTCTCCGATCTCGATTTTGGCGGTCAGAAAGGAC
ATACCATACTAGCATCATGTTCGAGTGATCTCCAGATCAAACTGTGGGAC
CCGAACAAGGATTATGCCAATGTTCGGACTCTTTCTGGGCATGACCATTC
AGTTTCGGCTGTGCGCTTTTTGCGACAGACAGATAACATTCTTATTTCGG
CCAGTCGGGATGCGACAATTCGGATATGGGATGTGTCAACCGGATACTGT
GTCAAGGTGATCGACTCGCAGGGCTCCTGGATCAACGACGTATCGCCTTC
TTTCGATGGAAAGTGGCTGGTCACAGGAGGCCGTGATCAAGCCGCGATGG
TTTGGGAAGTCGCATCAGCCAAATCGGTTGCGTCATTAATAGGCCACGAG
AATTTCATCGAGTGCTGCGTATTTGCGCCTCCCTCAAGCTATAAGCACTT
GGCCGCTATTGCGGGACTAAAGACAGCACCACCTGCGAGTAGCTCCTCCG
AATTCATTGCGACGGGAGCTCGTGACAAGACGATCAAGCTCTGGGAATCC
CGGGGCCGATTGATCAAGACATTAGTTGGGCACGACAACTGGGTACGAGG
CCTATTATTCCATCCTGGTGGGAAATATTTAATCAGTGTGGCGGACGACA
AAACAATACGTTGCTGGGATCTGTCTCAAGGAGGAAGATTGGTGAAGACG
ATCAACGCCCACGGGCATTTTGTTAGTTGCATTCGTTGGGGCCCAGTACC
TGTGAGCGATGTTCCAGTGGAGACTTCTGAATCGACTAAAAGTTCCAAGT
CGGACTCTGTCAAGCCTGGGTTTCAATGCGTCATTGCAACAGGGAGCGCC
GATTCAAGTACTAATACCAATACGAAGACTCAGATTCATGAAGCTCCCTC
CTCCCATCCGCAAGACACATACACACTCACACCCTTGTAAATGACCAAGA
TATTGACCTCCAGCCAAGCTGAGGAACTGCATAAGTCGATAATCGCCTAC
CTCTCATCAATAAATGCCTCGCGGAGTTGTGAAGTGCTGCGGGAGGAACT
CCAGGTGGACAGTAGTTTCGACGATGCGCTGTGCCGGAAATATGAGGGGC
TATTAGAGAAGAAATGGACCGGAATTGCTCGGCTGCAGAAAAAGATCTTG
GACTTAGAATCTAAACTCGCTGGGCTCCAAACCGAGCTTGACACTATATC
ACCTACAGCCCGTTCCACCGGGAAGGACCCGATAAACTGGCTTCCTACTT
CTTCCCGACACACATTCGAGTCGCACCGAGATGCTGTCACATGCGTCGCA
TTCCATCCTGTCTTCACCTCTCTCGCCTCCGGTTCCGAGGACTGCACAAT
CAAAATATGGGATTGGGAACTCGGCGAACTAGAGCGGACACTCAAGGGCC
ATATGAGGCCGGTCTCCGATCTCGATTTTGGCGGTCAGAAAGGACATACC
ATACTAGCATCATGTTCGAGTGATCTCCAGATCAAACTGTGGGACCCGAA
CAAGGATTATGCCAATGTTCGGACTCTTTCTGGGCATGACCATTCAGTTT
CGGCTGTGCGCTTTTTGCGACAGACAGATAACATTCTTATTTCGGCCAGT
CGGGATGCGACAATTCGGATATGGGATGTGTCAACCGGATACTGTGTCAA
GGTGATCGACTCGCAGGGCTCCTGGATCAACGACGTATCGCCTTCTTTCG
ATGGAAAGTGGCTGGTCACAGGAGGCCGTGATCAAGCCGCGATGGTTTGG
GAAGTCGCATCAGCCAAATCGGTTGCGTCATTAATAGGCCACGAGAATTT
CATCGAGTGCTGCGTATTTGCGCCTCCCTCAAGCTATAAGCACTTGGCCG
CTATTGCGGGACTAAAGACAGCACCACCTGCGAGTAGCTCCTCCGAATTC
ATTGCGACGGGAGCTCGTGACAAGACGATCAAGCTCTGGGAATCCCGGGG
CCGATTGATCAAGACATTAGTTGGGCACGACAACTGGGTACGAGGCCTAT
TATTCCATCCTGGTGGGAAATATTTAATCAGTGTGGCGGACGACAAAACA
ATACGTTGCTGGGATCTGTCTCAAGGAGGAAGATTGGTGAAGACGATCAA
CGCCCACGGGCATTTTGTTAGTTGCATTCGTTGGGGCCCAGTACCTGTGA
GCGATGTTCCAGTGGAGACTTCTGAATCGACTAAAAGTTCCAAGTCGGAC
TCTGTCAAGCCTGGGTTTCAATGCGTCATTGCAACAGGGAGCGCCGATTC
AAGTACTAATACCAATACGAAGACTCAGATTCATGAAGCTCCCTCCTCCC
ATCCGCAAGACACATACACACTCACACCCTTGTAAATGACCAAGATATTG
ACCTCCAGCCAAGCTGAGGAACTGCATAAGTCGATAATCGCCTACCTCTC
ATCAATAAATGCCTCGCGGAGTTGTGAAGTGCTGCGGGAGGAACTCCAGG
TGGACAGTAGTTTCGACGATGCGCTGTGCCGGAAATATGAGGGGCTATTA
GAGAAGAAATGGACCGGAATTGCTCGGCTGCAGAAAAAGATCTTGGACTT
AGAATCTAAACTCGCTGGGCTCCAAACCGAGCTTGACACTATATCACCTA
CAGCCCGTTCCACCGGGAAGGACCCGATAAACTGGCTTCCTACTTCTTCC
CGACACACATTCGAGTCGCACCGAGATGCTGTCACATGCGTCGCATTCCA
TCCTGTCTTCACCTCTCTCGCCTCCGGTTCCGAGGACTGCACAATCAAAA
TATGGGATTGGGAACTCGGCGAACTAGAGCGGACACTCAAGGGCCATATG
AGGCCGGTCTCCGATCTCGATTTTGGCGGTCAGAAAGGACATACCATACT
AGCATCATGTTCGAGTGATCTCCAGATCAAACTGTGGGACCCGAACAAGG
ATTATGCCAATGTTCGGACTCTTTCTGGGCATGACCATTCAGTTTCGGCT
GTGCGCTTTTTGCGACAGACAGATAACATTCTTATTTCGGCCAGTCGGGA
TGCGACAATTCGGATATGGGATGTGTCAACCGGATACTGTGTCAAGGTGA
TCGACTCGCAGGGCTCCTGGATCAACGACGTATCGCCTTCTTTCGATGGA
AAGTGGCTGGTCACAGGAGGCCGTGATCAAGCCGCGATGGTTTGGGAAGT
CGCATCAGCCAAATCGGTTGCGTCATTAATAGGCCACGAGAATTTCATCG
AGTGCTGCGTATTTGCGCCTCCCTCAAGCTATAAGCACTTGGCCGCTATT
GCGGGACTAAAGACAGCACCACCTGCGAGTAGCTCCTCCGAATTCATTGC
GACGGGAGCTCGTGACAAGACGATCAAGCTCTGGGAATCCCGGGGCCGAT
TGATCAAGACATTAGTTGGGCACGACAACTGGGTACGAGGCCTATTATTC
CATCCTGGTGGGAAATATTTAATCAGTGTGGCGGACGACAAAACAATACG
TTGCTGGGATCTGTCTCAAGGAGGAAGATTGGTGAAGACGATCAACGCCC
ACGGGCATTTTGTTAGTTGCATTCGTTGGGGCCCAGTACCTGTGAGCGAT
GTTCCAGTGGAGACTTCTGAATCGACTAAAAGTTCCAAGTCGGACTCTGT
CAAGCCTGGGTTTCAATGCGTCATTGCAACAGGGAGCGCCGATTCAAGTA
CTAATACCAATACGAAGACTCAGATTCATGAAGCTCCCTCCTCCCATCCG
CAAGACACATACACACTCACACCCTTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2905CAN33_2905Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2905-T1.exon1CAN33_2905-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2905-T1.exon2CAN33_2905-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2905-T1.exon3CAN33_2905-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_2905-T1.exon4CAN33_2905-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2905-T1.cdsCAN33_2905-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2905-T1CAN33_2905-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR037190
DBxrefInterPro:IPR006594
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR017252
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1810864..1812462 +
Powered by Drupal