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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000008.1:665975..667810- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_29265-T1 ID=CAN33_29265-T1|Name=CAN33_29265-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1836bp|location=Sequence derived from alignment at NKJJ01000008.1:665975..667810- (Aspergillus niger FDAARGOS_311)
ATGAGTGGCAGTTCGAATCAGTCCACCCGTACGAGTCCAGGCTCCTACAG
CACTACTCAGCGCACGCCCTCGGTCTCTTCGGGCGCGTCGCCTACCCACC
AGCCGCTTTCGGCCTCTCAAGCGCCCTCGACGGCTCAGAATGCGATGTCG
ACCGACGTGTACAATACGCCCGCATCGCAGGCACCAACTTCGTTAGGTCC
TTCGTTTAGCTACCCTTTCTCCCCGATCGGCCCCTCTCCCGCTTTTGACA
ACGTTTCCTCGTCTGCTATGCGTCTGGGCGACTCGGATCGGTCGGCGCAG
GGCCTGAATGGCTTTATCCGACCGACAAATGGAACAGGTGGAGGCGCGAT
CCTCATGCGCAAACTCCCGCGCAACACCAGTCGCGATGCTCTGCGCAGCA
TGCTACTCTTCGCCAAAGATTTTGTGGATGCCGACTTTGTGCCTTCTGAC
GCTCCGGAGGATAACGGATACTTGTGTGCGGTCGCGCGTTTCAGCACCCT
GGCTGCCGCGGAAGAAGCACGAGCACTTCTCGACGGCAAACCAAATTCGA
AGAACGACGCCACCATGATTGTGGAAATGTTCTACGGCTCCGTTGGTTCT
TCCTTGGTGCCCAGGCGAAACACAATCGACCACACCGCGACTCGGGGCTT
ACTGGGACATGTTAATGGAGGCTTACCGCGACAGTCGTCACGCTTCAACG
GAACCTTCCAGACCTTGGAGAAGCTGAGCGCGACCACGGGACCTGCTACC
GCTGGTGATACCCTACCCCCATCTGAACCTGGCTCCCGGCTTCACAGTCT
CTTCTCCCCCCAGTCCCCGATCGGCAACGGCGTTCCCGAGCTCCCGCGGG
TCAGTGGCAAATCGATGATTGATCAGGATATTGATGAAGATACTGGAGAG
TTGCTCAAGGATCCTGTGGGCTATGCCGAAAACGGGCATTCGTCTTCTGT
TTCTGTCCCTCGACGCTCCACGAACCCTCAGATTCTGGGTAACCAGTTTG
CCAACATGTCTTTGTCTGGCAATCTCAATTCCCCTCCACTACCTAATTAT
AACCAAGGAGGAAACACGCACATTGGCGTTCCAAACCCTCCATCGACGTT
CCCCCAACCGATGAACAATAACATCGGGACGGGCCATGTGTTCCCTTATG
GTAATCCGCATGTACCTCGCCATAGTCTCCCTGCAGCCAACCCGAACGAC
ATGAACCCTCCATGCAATACATTATACGTGGGAAACTTACCCCCAGATAC
CTCAGAGGAGGAGCTGAAGGCTCTGTTCTCGAAGCAGCGTGGATACAAGC
GGTTGTGCTTCCGAAACAAACAGAACGGGCCGATGTGCTTCGTGGAATTT
GACGATGTGGGCACCGCTGGAAAAGCGCTAAACGAGCTGTATGGCGTGAA
GTTGTCCAACAGTATCAAGACCGGTATCCGCCTAAGCTTTTCGAAGAACC
CTCTCGGGGTCCGATCAGGACAGCCCGGGTCCATGAGCGCGTCTAATGCC
ATGGCCTCTCAAGGTGGTGTGCCTGGGGGCAGTAGTCTTGGTGGAATGCA
CAATCACATGTTTTCGACGGTCAGTGGACCGCCACCGGGCCTGTCTGCGC
CCCCGGGTTTGGTTCCACCCGTGGCAATCAGAAACAACGGTGCCATGCAT
CCCTCCGGGAGTCCAAATGCGCCATTGCCCAGCAACGGTACTTTCAATGC
CAATTCGGGACTGGGAATCCGGACAAATCCGATGAACGCAATGGTGTCCC
CGCCACCTCAGCTCACCGGCGGAGCTTCAGGACCCAATGTGGGTGGCTAC
AATTCCTACTACCCGGATTATATGATGGGTCGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000008.1:665975..667810- >CAN33_29265-T1 ID=CAN33_29265-T1|Name=CAN33_29265-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1836bp|location=Sequence derived from alignment at NKJJ01000008.1:665975..667810- (Aspergillus niger FDAARGOS_311)
ATGAGTGGCAGTTCGAATCAGTCCACCCGTACGAGTCCAGGCTCCTACAG
CACTACTCAGCGCACGCCCTCGGTCTCTTCGGGCGCGTCGCCTACCCACC
AGCCGCTTTCGGCCTCTCAAGCGCCCTCGACGGCTCAGAATGCGATGTCG
ACCGACGTGTACAATACGCCCGCATCGCAGGCACCAACTTCGTTAGGTCC
TTCGTTTAGCTACCCTTTCTCCCCGATCGGCCCCTCTCCCGCTTTTGACA
ACGTTTCCTCGTCTGCTATGCGTCTGGGCGACTCGGATCGGTCGGCGCAG
GGCCTGAATGGCTTTATCCGACCGACAAATGGAACAGGTGGAGGCGCGAT
CCTCATGCGCAAACTCCCGCGCAACACCAGTCGCGATGCTCTGCGCAGCA
TGCTACTCTTCGCCAAAGATTTTGTGGATGCCGACTTTGTGCCTTCTGAC
GCTCCGGAGGATAACGGATACTTGTGTGCGGTCGCGCGTTTCAGCACCCT
GGCTGCCGCGGAAGAAGCACGAGCACTTCTCGACGGCAAACCAAATTCGA
AGAACGACGCCACCATGATTGTGGAAATGTTCTACGGCTCCGTTGGTTCT
TCCTTGGTGCCCAGGCGAAACACAATCGACCACACCGCGACTCGGGGCTT
ACTGGGACATGTTAATGGAGGCTTACCGCGACAGTCGTCACGCTTCAACG
GAACCTTCCAGACCTTGGAGAAGCTGAGCGCGACCACGGGACCTGCTACC
GCTGGTGATACCCTACCCCCATCTGAACCTGGCTCCCGGCTTCACAGTCT
CTTCTCCCCCCAGTCCCCGATCGGCAACGGCGTTCCCGAGCTCCCGCGGG
TCAGTGGCAAATCGATGATTGATCAGGATATTGATGAAGATACTGGAGAG
TTGCTCAAGGATCCTGTGGGCTATGCCGAAAACGGGCATTCGTCTTCTGT
TTCTGTCCCTCGACGCTCCACGAACCCTCAGATTCTGGGTAACCAGTTTG
CCAACATGTCTTTGTCTGGCAATCTCAATTCCCCTCCACTACCTAATTAT
AACCAAGGAGGAAACACGCACATTGGCGTTCCAAACCCTCCATCGACGTT
CCCCCAACCGATGAACAATAACATCGGGACGGGCCATGTGTTCCCTTATG
GTAATCCGCATGTACCTCGCCATAGTCTCCCTGCAGCCAACCCGAACGAC
ATGAACCCTCCATGCAATACATTATACGTGGGAAACTTACCCCCAGATAC
CTCAGAGGAGGAGCTGAAGGCTCTGTTCTCGAAGCAGCGTGGATACAAGC
GGTTGTGCTTCCGAAACAAACAGAACGGGCCGATGTGCTTCGTGGAATTT
GACGATGTGGGCACCGCTGGAAAAGCGCTAAACGAGCTGTATGGCGTGAA
GTTGTCCAACAGTATCAAGACCGGTATCCGCCTAAGCTTTTCGAAGAACC
CTCTCGGGGTCCGATCAGGACAGCCCGGGTCCATGAGCGCGTCTAATGCC
ATGGCCTCTCAAGGTGGTGTGCCTGGGGGCAGTAGTCTTGGTGGAATGCA
CAATCACATGTTTTCGACGGTCAGTGGACCGCCACCGGGCCTGTCTGCGC
CCCCGGGTTTGGTTCCACCCGTGGCAATCAGAAACAACGGTGCCATGCAT
CCCTCCGGGAGTCCAAATGCGCCATTGCCCAGCAACGGTACTTTCAATGC
CAATTCGGGACTGGGAATCCGGACAAATCCGATGAACGCAATGGTGTCCC
CGCCACCTCAGCTCACCGGCGGAGCTTCAGGACCCAATGTGGGTGGCTAC
AATTCCTACTACCCGGATTATATGATGGGTCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA recognition motif family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000008.1 | supercontig | NKJJ01000008.1:665975..667810 - |
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