You are here

Home

CAN33_29285-T1, CAN33_29285-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29285-T1
Unique NameCAN33_29285-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:678965..680308+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29285-T1 ID=CAN33_29285-T1|Name=CAN33_29285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1344bp|location=Sequence derived from alignment at NKJJ01000008.1:678965..680308+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCAGGTGCGATGGATGCAGTGGCTCATTTTTCGAAGCAAACGAC
TGTTGACACATTCCAGACATCCCCAAAGTTGTGCCGTTGACCTGCCACGG
ACACTCACGTCCCGTGCCGCATATCAACTTCTCATCCACTGTCGAGGATG
ATCAGTACTACCTAATCTCTGCCTGCAAAGGTGAATATCCTCAGAGCTAC
AGTTATAATTTCCGCGCTGACATCCACCAGACAACAATCCCATGTTGCGC
GATGGTATAACAGGTGACTGGTGCGCGTTCCCCGCATTGCATACTCCGCA
CACCGCACATGCTTACCATAAATGCCATTCAGGATTGGAACCTTCCTCGG
CCACAAGGGCGCAGTATGGCAAGCCCGTCTCTCGACAGATGCGAATTTGG
CAGCAACCGCAGCTGCGGACTTCTCCGCGTGAGTACCTACCTACCCACCT
TCAACGCACATCGCCGTCGCATCTCACTGACCTGCGATTTCTCTCCCCAT
ACAACAGCAAAATCTGGGACACTCACACTGGCGAATGCAAACACACCCTC
CAGCACTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTCCCC
CCAGGTCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCGACC
TCACTCGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACCCCC
AACAACGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATCGGCCCCGG
GGTTCACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACAACA
TCCTTACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTTCGC
TCGCGCCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAGTTG
CGAACTTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTACCG
TCGCGGCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGTCGT
CTCCTGAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGTCAA
CAATGAAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGGCGA
GAGTTTATGACGTCCGCACGGAGGAAGAGCTGGGTACGTTTCATCCCCAT
TTCAACCCCACATTATCCATTGCTGTTCACTTCGATGTGGCTAACAATCC
ACCGCAGAGGTTCAAAAAGGCCATCACGGCCCGATCTGGTCTGTCAGTTT
CTCGCCTGACGGCAAACTGTATGGTACAGGAAGCGAGGATGGAACGATCA
AGTTGTGGAAGGCTTGCAGGGAGCCGTATGGCCTCTGGCGGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000008.1:678965..680308+

>CAN33_29285-T1 ID=CAN33_29285-T1|Name=CAN33_29285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6138bp|location=Sequence derived from alignment at NKJJ01000008.1:678965..680308+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCAGACATCCCCAAAGTTGTGCCGTTGACCTGCCACGGACACTC
ACGTCCCGTGCCGCATATCAACTTCTCATCCACTGTCGAGGATGATCAGT
ACTACCTAATCTCTGCCTGCAAAGACAACAATCCCATGTTGCGCGATGGT
ATAACAGGTGACTGGATTGGAACCTTCCTCGGCCACAAGGGCGCAGTATG
GCAAGCCCGTCTCTCGACAGATGCGAATTTGGCAGCAACCGCAGCTGCGG
ACTTCTCCGCCAAAATCTGGGACACTCACACTGGCGAATGCAAACACACC
CTCCAGCACTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTC
CCCCCAGGTCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCG
ACCTCACTCGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACC
CCCAACAACGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATCGGCCC
CGGGGTTCACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACA
ACATCCTTACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTT
CGCTCGCGCCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAG
TTGCGAACTTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTA
CCGTCGCGGCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGT
CGTCTCCTGAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGT
CAACAATGAAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGG
CGAGAGTTTATGACGTCCGCACGGAGGAAGAGCTGGAGGTTCAAAAAGGC
CATCACGGCCCGATCTGGTCTGTCAGTTTCTCGCCTGACGGCAAACTGTA
TGGTACAGGAAGCGAGGATGGAACGATCAAGTTGTGGAAGGCTTGCAGGG
AGCCGTATGGCCTCTGGCGGTGAATGGCGTCAGACATCCCCAAAGTTGTG
CCGTTGACCTGCCACGGACACTCACGTCCCGTGCCGCATATCAACTTCTC
ATCCACTGTCGAGGATGATCAGTACTACCTAATCTCTGCCTGCAAAGACA
ACAATCCCATGTTGCGCGATGGTATAACAGGTGACTGGATTGGAACCTTC
CTCGGCCACAAGGGCGCAGTATGGCAAGCCCGTCTCTCGACAGATGCGAA
TTTGGCAGCAACCGCAGCTGCGGACTTCTCCGCCAAAATCTGGGACACTC
ACACTGGCGAATGCAAACACACCCTCCAGCACTCGCACATCTGTCGTGCA
GTAGCGTTTCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACAGGTGGTTT
CGAGAAGAAGCTCCGCATTTTCGACCTCACTCGCAGTGGGGGCAGTAACA
GCTCCTCACCGACAAGTGCCACCCCCAACAACGACGCCAGTCCTTCCGCG
GTAACAAGCTACGAGATCGGCCCCGGGGTTCACGGCGGCACCATCAAATC
GATTGTCTGGAATCAGGACTACAACATCCTTACGACCGCCGCGGAAGACC
GCAAAATCAGATGGTGGGATCTTCGCTCGCGCCACCCAGTCGTCGAATAC
GCCGTAGAAGGTACCATCGGGAGTTGCGAACTTAATTCCCTCGCCGTCAG
ACCTAACGACGCCGGAATTCTTACCGTCGCGGCCGGCAGATCCGTTTATC
TATTCGACGGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCGATTTCCGC
TATGAGGTCGCCAGTGCAGCGGTCAACAATGAAACAAGCAGGTTGGTCAC
AGGTAGTGCCGAGGATACCTGGGCGAGAGTTTATGACGTCCGCACGGAGG
AAGAGCTGGAGGTTCAAAAAGGCCATCACGGCCCGATCTGGTCTGTCAGT
TTCTCGCCTGACGGCAAACTGTATGGTACAGGAAGCGAGGATGGAACGAT
CAAGTTGTGGAAGGCTTGCAGGGAGCCGTATGGCCTCTGGCGGTGAATGG
CGTCAGACATCCCCAAAGTTGTGCCGTTGACCTGCCACGGACACTCACGT
CCCGTGCCGCATATCAACTTCTCATCCACTGTCGAGGATGATCAGTACTA
CCTAATCTCTGCCTGCAAAGACAACAATCCCATGTTGCGCGATGGTATAA
CAGGTGACTGGATTGGAACCTTCCTCGGCCACAAGGGCGCAGTATGGCAA
GCCCGTCTCTCGACAGATGCGAATTTGGCAGCAACCGCAGCTGCGGACTT
CTCCGCCAAAATCTGGGACACTCACACTGGCGAATGCAAACACACCCTCC
AGCACTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTCCCCC
CAGGTCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCGACCT
CACTCGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACCCCCA
ACAACGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATCGGCCCCGGG
GTTCACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACAACAT
CCTTACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTTCGCT
CGCGCCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAGTTGC
GAACTTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTACCGT
CGCGGCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGTCGTC
TCCTGAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGTCAAC
AATGAAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGGCGAG
AGTTTATGACGTCCGCACGGAGGAAGAGCTGGAGGTTCAAAAAGGCCATC
ACGGCCCGATCTGGTCTGTCAGTTTCTCGCCTGACGGCAAACTGTATGGT
ACAGGAAGCGAGGATGGAACGATCAAGTTGTGGAAGGCTTGCAGGGAGCC
GTATGGCCTCTGGCGGTGAATGGCGTCAGACATCCCCAAAGTTGTGCCGT
TGACCTGCCACGGACACTCACGTCCCGTGCCGCATATCAACTTCTCATCC
ACTGTCGAGGATGATCAGTACTACCTAATCTCTGCCTGCAAAGACAACAA
TCCCATGTTGCGCGATGGTATAACAGGTGACTGGATTGGAACCTTCCTCG
GCCACAAGGGCGCAGTATGGCAAGCCCGTCTCTCGACAGATGCGAATTTG
GCAGCAACCGCAGCTGCGGACTTCTCCGCCAAAATCTGGGACACTCACAC
TGGCGAATGCAAACACACCCTCCAGCACTCGCACATCTGTCGTGCAGTAG
CGTTTCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACAGGTGGTTTCGAG
AAGAAGCTCCGCATTTTCGACCTCACTCGCAGTGGGGGCAGTAACAGCTC
CTCACCGACAAGTGCCACCCCCAACAACGACGCCAGTCCTTCCGCGGTAA
CAAGCTACGAGATCGGCCCCGGGGTTCACGGCGGCACCATCAAATCGATT
GTCTGGAATCAGGACTACAACATCCTTACGACCGCCGCGGAAGACCGCAA
AATCAGATGGTGGGATCTTCGCTCGCGCCACCCAGTCGTCGAATACGCCG
TAGAAGGTACCATCGGGAGTTGCGAACTTAATTCCCTCGCCGTCAGACCT
AACGACGCCGGAATTCTTACCGTCGCGGCCGGCAGATCCGTTTATCTATT
CGACGGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCGATTTCCGCTATG
AGGTCGCCAGTGCAGCGGTCAACAATGAAACAAGCAGGTTGGTCACAGGT
AGTGCCGAGGATACCTGGGCGAGAGTTTATGACGTCCGCACGGAGGAAGA
GCTGGAGGTTCAAAAAGGCCATCACGGCCCGATCTGGTCTGTCAGTTTCT
CGCCTGACGGCAAACTGTATGGTACAGGAAGCGAGGATGGAACGATCAAG
TTGTGGAAGGCTTGCAGGGAGCCGTATGGCCTCTGGCGGTGAATGGCGTC
AGACATCCCCAAAGTTGTGCCGTTGACCTGCCACGGACACTCACGTCCCG
TGCCGCATATCAACTTCTCATCCACTGTCGAGGATGATCAGTACTACCTA
ATCTCTGCCTGCAAAGACAACAATCCCATGTTGCGCGATGGTATAACAGG
TGACTGGATTGGAACCTTCCTCGGCCACAAGGGCGCAGTATGGCAAGCCC
GTCTCTCGACAGATGCGAATTTGGCAGCAACCGCAGCTGCGGACTTCTCC
GCCAAAATCTGGGACACTCACACTGGCGAATGCAAACACACCCTCCAGCA
CTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTCCCCCCAGG
TCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCGACCTCACT
CGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACCCCCAACAA
CGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATCGGCCCCGGGGTTC
ACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACAACATCCTT
ACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTTCGCTCGCG
CCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAGTTGCGAAC
TTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTACCGTCGCG
GCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGTCGTCTCCT
GAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGTCAACAATG
AAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGGCGAGAGTT
TATGACGTCCGCACGGAGGAAGAGCTGGAGGTTCAAAAAGGCCATCACGG
CCCGATCTGGTCTGTCAGTTTCTCGCCTGACGGCAAACTGTATGGTACAG
GAAGCGAGGATGGAACGATCAAGTTGTGGAAGGCTTGCAGGGAGCCGTAT
GGCCTCTGGCGGTGAATGGCGTCAGACATCCCCAAAGTTGTGCCGTTGAC
CTGCCACGGACACTCACGTCCCGTGCCGCATATCAACTTCTCATCCACTG
TCGAGGATGATCAGTACTACCTAATCTCTGCCTGCAAAGACAACAATCCC
ATGTTGCGCGATGGTATAACAGGTGACTGGATTGGAACCTTCCTCGGCCA
CAAGGGCGCAGTATGGCAAGCCCGTCTCTCGACAGATGCGAATTTGGCAG
CAACCGCAGCTGCGGACTTCTCCGCCAAAATCTGGGACACTCACACTGGC
GAATGCAAACACACCCTCCAGCACTCGCACATCTGTCGTGCAGTAGCGTT
TCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACAGGTGGTTTCGAGAAGA
AGCTCCGCATTTTCGACCTCACTCGCAGTGGGGGCAGTAACAGCTCCTCA
CCGACAAGTGCCACCCCCAACAACGACGCCAGTCCTTCCGCGGTAACAAG
CTACGAGATCGGCCCCGGGGTTCACGGCGGCACCATCAAATCGATTGTCT
GGAATCAGGACTACAACATCCTTACGACCGCCGCGGAAGACCGCAAAATC
AGATGGTGGGATCTTCGCTCGCGCCACCCAGTCGTCGAATACGCCGTAGA
AGGTACCATCGGGAGTTGCGAACTTAATTCCCTCGCCGTCAGACCTAACG
ACGCCGGAATTCTTACCGTCGCGGCCGGCAGATCCGTTTATCTATTCGAC
GGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCGATTTCCGCTATGAGGT
CGCCAGTGCAGCGGTCAACAATGAAACAAGCAGGTTGGTCACAGGTAGTG
CCGAGGATACCTGGGCGAGAGTTTATGACGTCCGCACGGAGGAAGAGCTG
GAGGTTCAAAAAGGCCATCACGGCCCGATCTGGTCTGTCAGTTTCTCGCC
TGACGGCAAACTGTATGGTACAGGAAGCGAGGATGGAACGATCAAGTTGT
GGAAGGCTTGCAGGGAGCCGTATGGCCTCTGGCGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29285CAN33_29285Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29285-T1CAN33_29285-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29285-T1.exon1CAN33_29285-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29285-T1.exon2CAN33_29285-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29285-T1.exon3CAN33_29285-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_29285-T1.exon4CAN33_29285-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_29285-T1.exon5CAN33_29285-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_29285-T1.exon6CAN33_29285-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29285-T1.cdsCAN33_29285-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:678965..680308 +
Powered by Drupal