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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000008.1:737418..738484+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_29385-T1 ID=CAN33_29385-T1|Name=CAN33_29385-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1067bp|location=Sequence derived from alignment at NKJJ01000008.1:737418..738484+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCCAGCAGAATGGCGATTCCAACGGCACTGCCAACACCTTCAC
TCTGAAGGCCGGTTTGGCTCAGATGTTGAAGGGTGGCGTGATCATGGATG
TTGTCAATGCGGAACAGGTATGCCTCTACATGGGATACCTAAGCTCAATT
TGAGTCAGTCATTGCTAACGTTTGAATGTCAACAGGCTCGCATTGCTGAA
GAGGCCGGTGCTGCCGCTGTCATGGCCCTCGAGCGTGTCCCCGCCGACAT
TAGAGCAACGGGTGGCGTGGCTCGCATGTCCGATCCCGGCATGATCAAGG
AGATCCAGAAGGCCGTCACCATCCCCGTTATGGCCAAGGCTCGTATTGGA
CACTTCGTTGAGTGCCAGGTAAGCTACAGTCAACAATTCTCTCTCACGGC
TGTCCGTTTCGCCACAGACTAACACACCGTCCACTAGATCCTCGAAGCCA
TTGGCGTCGACTACATTGACGAGTCGGAAGTCCTGACCCCCGCCGACGAC
GTCTACCACGTTACCAAGCACAACTTCAAGGTTCCCTTCGTCTGTGGCTG
CCGCAACTTGGGTGAGGCTCTTCGCCGTATCTCTGAGGGCGCTGCCATGA
TTCGCACCAAGGGTGAGGCCGGTACCGGAGACGTCGTGGAAGCTGTCAAG
CACATCCGCCAGGTCAGCTCGGACATTGCCCGTGCCCGTGCCATCTATCA
GTCCTCTGCCGACTACGAGCCCGAGCTGCGCCAGTTTGCCCGTCAGCTGG
AGGTTCCCTATGAGTTGCTCCGTGAGACGGCCGAGAAGGGTCGTCTGCCC
GTGGTGAACTTTGCTGCTGGTGGCGTTGCCACCCCTGCCGATGCGGCGCT
CATGATGCAGCTGGGCTGCGATGGTGTGTTTGTTGGTTCCGGTATCTTCA
AGTCTGGCGATGCGAAGAAGCGCGCCAAGGCCATCGTGCAGGCCGTCACC
CACTTCCGCGACCCCAAGGTTCTGGCCGAGGTGAGCGAGGGTCTGGGTGA
GGCCATGGTGGGCATCAACGTGGCGCAGATGTCCGAGGCCGACAAGCTCG
CCAAGCGGGGATGGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000008.1:737418..738484+ >CAN33_29385-T1 ID=CAN33_29385-T1|Name=CAN33_29385-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2790bp|location=Sequence derived from alignment at NKJJ01000008.1:737418..738484+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCCAGCAGAATGGCGATTCCAACGGCACTGCCAACACCTTCAC
TCTGAAGGCCGGTTTGGCTCAGATGTTGAAGGGTGGCGTGATCATGGATG
TTGTCAATGCGGAACAGGCTCGCATTGCTGAAGAGGCCGGTGCTGCCGCT
GTCATGGCCCTCGAGCGTGTCCCCGCCGACATTAGAGCAACGGGTGGCGT
GGCTCGCATGTCCGATCCCGGCATGATCAAGGAGATCCAGAAGGCCGTCA
CCATCCCCGTTATGGCCAAGGCTCGTATTGGACACTTCGTTGAGTGCCAG
ATCCTCGAAGCCATTGGCGTCGACTACATTGACGAGTCGGAAGTCCTGAC
CCCCGCCGACGACGTCTACCACGTTACCAAGCACAACTTCAAGGTTCCCT
TCGTCTGTGGCTGCCGCAACTTGGGTGAGGCTCTTCGCCGTATCTCTGAG
GGCGCTGCCATGATTCGCACCAAGGGTGAGGCCGGTACCGGAGACGTCGT
GGAAGCTGTCAAGCACATCCGCCAGGTCAGCTCGGACATTGCCCGTGCCC
GTGCCATCTATCAGTCCTCTGCCGACTACGAGCCCGAGCTGCGCCAGTTT
GCCCGTCAGCTGGAGGTTCCCTATGAGTTGCTCCGTGAGACGGCCGAGAA
GGGTCGTCTGCCCGTGGTGAACTTTGCTGCTGGTGGCGTTGCCACCCCTG
CCGATGCGGCGCTCATGATGCAGCTGGGCTGCGATGGTGTGTTTGTTGGT
TCCGGTATCTTCAAGTCTGGCGATGCGAAGAAGCGCGCCAAGGCCATCGT
GCAGGCCGTCACCCACTTCCGCGACCCCAAGGTTCTGGCCGAGGTGAGCG
AGGGTCTGGGTGAGGCCATGGTGGGCATCAACGTGGCGCAGATGTCCGAG
GCCGACAAGCTCGCCAAGCGGGGATGGTAAATGGCTTCCCAGCAGAATGG
CGATTCCAACGGCACTGCCAACACCTTCACTCTGAAGGCCGGTTTGGCTC
AGATGTTGAAGGGTGGCGTGATCATGGATGTTGTCAATGCGGAACAGGCT
CGCATTGCTGAAGAGGCCGGTGCTGCCGCTGTCATGGCCCTCGAGCGTGT
CCCCGCCGACATTAGAGCAACGGGTGGCGTGGCTCGCATGTCCGATCCCG
GCATGATCAAGGAGATCCAGAAGGCCGTCACCATCCCCGTTATGGCCAAG
GCTCGTATTGGACACTTCGTTGAGTGCCAGATCCTCGAAGCCATTGGCGT
CGACTACATTGACGAGTCGGAAGTCCTGACCCCCGCCGACGACGTCTACC
ACGTTACCAAGCACAACTTCAAGGTTCCCTTCGTCTGTGGCTGCCGCAAC
TTGGGTGAGGCTCTTCGCCGTATCTCTGAGGGCGCTGCCATGATTCGCAC
CAAGGGTGAGGCCGGTACCGGAGACGTCGTGGAAGCTGTCAAGCACATCC
GCCAGGTCAGCTCGGACATTGCCCGTGCCCGTGCCATCTATCAGTCCTCT
GCCGACTACGAGCCCGAGCTGCGCCAGTTTGCCCGTCAGCTGGAGGTTCC
CTATGAGTTGCTCCGTGAGACGGCCGAGAAGGGTCGTCTGCCCGTGGTGA
ACTTTGCTGCTGGTGGCGTTGCCACCCCTGCCGATGCGGCGCTCATGATG
CAGCTGGGCTGCGATGGTGTGTTTGTTGGTTCCGGTATCTTCAAGTCTGG
CGATGCGAAGAAGCGCGCCAAGGCCATCGTGCAGGCCGTCACCCACTTCC
GCGACCCCAAGGTTCTGGCCGAGGTGAGCGAGGGTCTGGGTGAGGCCATG
GTGGGCATCAACGTGGCGCAGATGTCCGAGGCCGACAAGCTCGCCAAGCG
GGGATGGTAAATGGCTTCCCAGCAGAATGGCGATTCCAACGGCACTGCCA
ACACCTTCACTCTGAAGGCCGGTTTGGCTCAGATGTTGAAGGGTGGCGTG
ATCATGGATGTTGTCAATGCGGAACAGGCTCGCATTGCTGAAGAGGCCGG
TGCTGCCGCTGTCATGGCCCTCGAGCGTGTCCCCGCCGACATTAGAGCAA
CGGGTGGCGTGGCTCGCATGTCCGATCCCGGCATGATCAAGGAGATCCAG
AAGGCCGTCACCATCCCCGTTATGGCCAAGGCTCGTATTGGACACTTCGT
TGAGTGCCAGATCCTCGAAGCCATTGGCGTCGACTACATTGACGAGTCGG
AAGTCCTGACCCCCGCCGACGACGTCTACCACGTTACCAAGCACAACTTC
AAGGTTCCCTTCGTCTGTGGCTGCCGCAACTTGGGTGAGGCTCTTCGCCG
TATCTCTGAGGGCGCTGCCATGATTCGCACCAAGGGTGAGGCCGGTACCG
GAGACGTCGTGGAAGCTGTCAAGCACATCCGCCAGGTCAGCTCGGACATT
GCCCGTGCCCGTGCCATCTATCAGTCCTCTGCCGACTACGAGCCCGAGCT
GCGCCAGTTTGCCCGTCAGCTGGAGGTTCCCTATGAGTTGCTCCGTGAGA
CGGCCGAGAAGGGTCGTCTGCCCGTGGTGAACTTTGCTGCTGGTGGCGTT
GCCACCCCTGCCGATGCGGCGCTCATGATGCAGCTGGGCTGCGATGGTGT
GTTTGTTGGTTCCGGTATCTTCAAGTCTGGCGATGCGAAGAAGCGCGCCA
AGGCCATCGTGCAGGCCGTCACCCACTTCCGCGACCCCAAGGTTCTGGCC
GAGGTGAGCGAGGGTCTGGGTGAGGCCATGGTGGGCATCAACGTGGCGCA
GATGTCCGAGGCCGACAAGCTCGCCAAGCGGGGATGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042819 | vitamin B6 biosynthetic process |
| GO:0042823 | pyridoxal phosphate biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263MIB |
| DBxref | InterPro:IPR011060 |
| DBxref | InterPro:IPR033755 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR001852 |
| DBxref | PFAM:PF01680 |
| Product | pyridoxal 5'-phosphate synthase synthase subunit Pdx1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000008.1 | supercontig | NKJJ01000008.1:737418..738484 + |
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