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CAN33_29605-T1, CAN33_29605-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29605-T1
Unique NameCAN33_29605-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:909436..911576-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29605-T1 ID=CAN33_29605-T1|Name=CAN33_29605-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2141bp|location=Sequence derived from alignment at NKJJ01000008.1:909436..911576- (Aspergillus niger FDAARGOS_311)
ATGGCCTTCCGAATACCGATCAGCTTCCCATCACAACACGTTCATCGAAC
TGGAAGTCACTCGCACGCCTCTCACGGACTGATCCTGCTTCATGGCATCT
GAATGGATCGCATTCGCCAGAAACTGGGGAGATATCCCGTTTCCAGCGTC
CTGAGGGCTTTTAGAGGCCCGCGGTGGTCCCTTACGTCGATTCATTATCC
GCACCTGCGCTTCCGCTCTACAGTCACATCCGCCGCCCTTCCCTCAGCAA
TTACAGCCCCAGAAACCCCCCGCTGATCGTTCTCCGCGACTACCAAGAAG
AATGCATTCAGTCTGTGCTGGATCATCTGGCCCAGGGTCACAAACGTCTA
GGTATTTCGCTTGCCACAGGAGCGGGGAAGACGGTCATCTTCACCCAATT
AATCGGACGAATACCGCCGCGGAATGGTGTCCATGACAAGACCCTTATTC
TGGTTCACCGAAGGGAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCCTT
GCCTATCCCGATCGAGCTGTGGAGATTGAGATGGGGAATAGTGTCGCGTC
TGGGTCTGGGGATATCATCATTGCTTCCATACGGAGTCTTACCTCCAAGA
ATAGGATCTCCAAATTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGGAT
GAGGCACACCACATTGTTGCACCGACGTACCGCGTTGCTCTCGAACATTT
TGGCCTCAGTAACCCGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTCTG
CCACGTTCTCACGCTTTGATGGACTCAAATTGGGTGCCGCAATCGACCAT
ATAGTGTACCATAAGGACTACATGGATATGATTGACGAAAAATGGCTGTC
CAATGCCATTTTTACCACTGTTCGGTCAGAAGCAAATCTCTCACGCGTTA
AGAAGGACAAATTCGGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCGTC
AATACCACGAAAACTAATGATATCACTGTACGCGCATGGCTGGCTAACGC
ACACGATCGAAAGTCTACACTGGTATTTTGTGTCGACGTTGAACATACTA
GACAGCTTACTGAGGCGTTCCGCGCACTGGGCATTGACGCTCGGTATATC
ACGGCGGGAACTCCGAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTCCG
GAACCAGGAGTATCCCGTGCTTCTCAATTGCGGCTTATTTACAGAAGGTA
CAGATATTCCCAATATTGACTGCGTCCTCCTGGCACGTCCGACACGGTCT
CGAAATCTTCTTATACAGATGATCGGACGAGGGTTACGGCTGCACCCGGG
GAAGACCGACTGCCATATAATTGACATGGTGGCTACCCTGGACACTGGTG
TCATTTCTACCCCTACGCTCTTCGGACTACACCCAGATGAGCTTCTAGAA
AGCGCGAGGGCAAAAAATCTAAGAGAAAAGAAGGAGGATGCCGCAATGGA
TGCCGAAGGCCGCACCGATTATCCGCCAGAGACAAGCACGTCTGCCGAAG
AACCCGACACAACTGATGATATCAAACTTACCTTCACCAAGTACGATACC
ATCTACGACCTCATTCATGATATGAAGTCTGAGAAACACATCCGCTCCCT
CAGTCGCTACGCCTGGGTCCGCGTAGATGAGGACAAATATACACTGTCTG
ACTCAACAGGATGGATCACCCTTGAGAAGACTAGAAACATATCTAACAAG
GGAAAAGAAAGTGACCCGTCCGCTACATATACCGTCCACCATGTGATGAA
GTTCAAGTCTGCTACTGAATCGACCCAGTACACTCGGCCACGTTTGATCG
CTACGGCCATGGACTTTGAATCCACAGTCCGTGCTGCTGATACCTTCGCG
GCCTCTGAATTCGACGAACGGTACATCTCCACCCGGCAGCCCTGGCGTCA
GCATCCGGCCACTGCAGCGCAGGTAACGATGCTGAATAAAGCTAAGATTC
GGAATGGACGGATTGCGCCTGGGGATTTGACACGAGGCCAGGCCGCAGAC
CTGATTACGAAGCTGAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGGCA
GAAAAAACGACGGGCTGCCGATGAGAAAGCACAGGAGTTGGCCGAACTCC
GGAGACGCGAAGAGGTGAGAGTGGGACCTGTAGAGGGATGA
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Coding sequence (CDS) from alignment at NKJJ01000008.1:909436..911576-

>CAN33_29605-T1 ID=CAN33_29605-T1|Name=CAN33_29605-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4032bp|location=Sequence derived from alignment at NKJJ01000008.1:909436..911576- (Aspergillus niger FDAARGOS_311)
AGGCCCGCGGTGGTCCCTTACGTCGATTCATTATCCGCACCTGCGCTTCC
GCTCTACAGTCACATCCGCCGCCCTTCCCTCAGCAATTACAGCCCCAGAA
ACCCCCCGCTGATCGTTCTCCGCGACTACCAAGAAGAATGCATTCAGTCT
GTGCTGGATCATCTGGCCCAGGGTCACAAACGTCTAGGTATTTCGCTTGC
CACAGGAGCGGGGAAGACGGTCATCTTCACCCAATTAATCGGACGAATAC
CGCCGCGGAATGGTGTCCATGACAAGACCCTTATTCTGGTTCACCGAAGG
GAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCCTTGCCTATCCCGATCG
AGCTGTGGAGATTGAGATGGGGAATAGTGTCGCGTCTGGGTCTGGGGATA
TCATCATTGCTTCCATACGGAGTCTTACCTCCAAGAATAGGATCTCCAAA
TTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGGATGAGGCACACCACAT
TGTTGCACCGACGTACCGCGTTGCTCTCGAACATTTTGGCCTCAGTAACC
CGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTCTGCCACGTTCTCACGC
TTTGATGGACTCAAATTGGGTGCCGCAATCGACCATATAGTGTACCATAA
GGACTACATGGATATGATTGACGAAAAATGGCTGTCCAATGCCATTTTTA
CCACTGTTCGGTCAGAAGCAAATCTCTCACGCGTTAAGAAGGACAAATTC
GGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCGTCAATACCACGAAAAC
TAATGATATCACTGTACGCGCATGGCTGGCTAACGCACACGATCGAAAGT
CTACACTGGTATTTTGTGTCGACGTTGAACATACTAGACAGCTTACTGAG
GCGTTCCGCGCACTGGGCATTGACGCTCGGTATATCACGGCGGGAACTCC
GAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTCCGGAACCAGGAGTATC
CCGTGCTTCTCAATTGCGGCTTATTTACAGAAGGTACAGATATTCCCAAT
ATTGACTGCGTCCTCCTGGCACGTCCGACACGGTCTCGAAATCTTCTTAT
ACAGATGATCGGACGAGGGTTACGGCTGCACCCGGGGAAGACCGACTGCC
ATATAATTGACATGGTGGCTACCCTGGACACTGGTGTCATTTCTACCCCT
ACGCTCTTCGGACTACACCCAGATGAGCTTCTAGAAAGCGCGAGGGCAAA
AAATCTAAGAGAAAAGAAGGAGGATGCCGCAATGGATGCCGAAGGCCGCA
CCGATTATCCGCCAGAGACAAGCACGTCTGCCGAAGAACCCGACACAACT
GATGATATCAAACTTACCTTCACCAAGTACGATACCATCTACGACCTCAT
TCATGATATGAAGTCTGAGAAACACATCCGCTCCCTCAGTCGCTACGCCT
GGGTCCGCGTAGATGAGGACAAATATACACTGTCTGACTCAACAGGATGG
ATCACCCTTGAGAAGACTAGAAACATATCTAACAAGGGAAAAGAAAGTGA
CCCGTCCGCTACATATACCGTCCACCATGTGATGAAGTTCAAGTCTGCTA
CTGAATCGACCCAGTACACTCGGCCACGTTTGATCGCTACGGCCATGGAC
TTTGAATCCACAGTCCGTGCTGCTGATACCTTCGCGGCCTCTGAATTCGA
CGAACGGTACATCTCCACCCGGCAGCCCTGGCGTCAGCATCCGGCCACTG
CAGCGCAGGTAACGATGCTGAATAAAGCTAAGATTCGGAATGGACGGATT
GCGCCTGGGGATTTGACACGAGGCCAGGCCGCAGACCTGATTACGAAGCT
GAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGGCAGAAAAAACGACGGG
CTGCCGATGAGAAAGCACAGGAGTTGGCCGAACTCCGGAGACGCGAAGAG
GTGAGAGTGGGACCTGTAGAGGGATGAATGGCCTTCCGAATACCGATCAG
CTTCCCATCACAACACAGGCCCGCGGTGGTCCCTTACGTCGATTCATTAT
CCGCACCTGCGCTTCCGCTCTACAGTCACATCCGCCGCCCTTCCCTCAGC
AATTACAGCCCCAGAAACCCCCCGCTGATCGTTCTCCGCGACTACCAAGA
AGAATGCATTCAGTCTGTGCTGGATCATCTGGCCCAGGGTCACAAACGTC
TAGGTATTTCGCTTGCCACAGGAGCGGGGAAGACGGTCATCTTCACCCAA
TTAATCGGACGAATACCGCCGCGGAATGGTGTCCATGACAAGACCCTTAT
TCTGGTTCACCGAAGGGAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCC
TTGCCTATCCCGATCGAGCTGTGGAGATTGAGATGGGGAATAGTGTCGCG
TCTGGGTCTGGGGATATCATCATTGCTTCCATACGGAGTCTTACCTCCAA
GAATAGGATCTCCAAATTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGG
ATGAGGCACACCACATTGTTGCACCGACGTACCGCGTTGCTCTCGAACAT
TTTGGCCTCAGTAACCCGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTC
TGCCACGTTCTCACGCTTTGATGGACTCAAATTGGGTGCCGCAATCGACC
ATATAGTGTACCATAAGGACTACATGGATATGATTGACGAAAAATGGCTG
TCCAATGCCATTTTTACCACTGTTCGGTCAGAAGCAAATCTCTCACGCGT
TAAGAAGGACAAATTCGGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCG
TCAATACCACGAAAACTAATGATATCACTGTACGCGCATGGCTGGCTAAC
GCACACGATCGAAAGTCTACACTGGTATTTTGTGTCGACGTTGAACATAC
TAGACAGCTTACTGAGGCGTTCCGCGCACTGGGCATTGACGCTCGGTATA
TCACGGCGGGAACTCCGAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTC
CGGAACCAGGAGTATCCCGTGCTTCTCAATTGCGGCTTATTTACAGAAGG
TACAGATATTCCCAATATTGACTGCGTCCTCCTGGCACGTCCGACACGGT
CTCGAAATCTTCTTATACAGATGATCGGACGAGGGTTACGGCTGCACCCG
GGGAAGACCGACTGCCATATAATTGACATGGTGGCTACCCTGGACACTGG
TGTCATTTCTACCCCTACGCTCTTCGGACTACACCCAGATGAGCTTCTAG
AAAGCGCGAGGGCAAAAAATCTAAGAGAAAAGAAGGAGGATGCCGCAATG
GATGCCGAAGGCCGCACCGATTATCCGCCAGAGACAAGCACGTCTGCCGA
AGAACCCGACACAACTGATGATATCAAACTTACCTTCACCAAGTACGATA
CCATCTACGACCTCATTCATGATATGAAGTCTGAGAAACACATCCGCTCC
CTCAGTCGCTACGCCTGGGTCCGCGTAGATGAGGACAAATATACACTGTC
TGACTCAACAGGATGGATCACCCTTGAGAAGACTAGAAACATATCTAACA
AGGGAAAAGAAAGTGACCCGTCCGCTACATATACCGTCCACCATGTGATG
AAGTTCAAGTCTGCTACTGAATCGACCCAGTACACTCGGCCACGTTTGAT
CGCTACGGCCATGGACTTTGAATCCACAGTCCGTGCTGCTGATACCTTCG
CGGCCTCTGAATTCGACGAACGGTACATCTCCACCCGGCAGCCCTGGCGT
CAGCATCCGGCCACTGCAGCGCAGGTAACGATGCTGAATAAAGCTAAGAT
TCGGAATGGACGGATTGCGCCTGGGGATTTGACACGAGGCCAGGCCGCAG
ACCTGATTACGAAGCTGAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGG
CAGAAAAAACGACGGGCTGCCGATGAGAAAGCACAGGAGTTGGCCGAACT
CCGGAGACGCGAAGAGGTGAGAGTGGGACCTGTAGAGGGATGAATGGCCT
TCCGAATACCGATCAGCTTCCCATCACAACAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29605CAN33_29605Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29605-T1CAN33_29605-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29605-T1.cdsCAN33_29605-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29605-T1.exon2CAN33_29605-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29605-T1.exon1CAN33_29605-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.7
NoteBUSCO:EOG09261CM0
NoteSMCOG1122:ATP-dependent RNA helicase
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006935
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductType III restriction enzyme res subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:909436..911576 -
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