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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000008.1:947736..949655+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_29670-T1 ID=CAN33_29670-T1|Name=CAN33_29670-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1920bp|location=Sequence derived from alignment at NKJJ01000008.1:947736..949655+ (Aspergillus niger FDAARGOS_311)
ATGCTCGACGTTCTTCGTGGTCAATACATTTGCACACCGCCCACAGCGCG
CAGCTATCCGTACCTCCTCAGCGACGAGATCGCCGAAAAGGATCACCGCC
TCCGGTTTGCGGGCAACGCAATACAATACATTGGCTTCAGTGGGGAAGGT
TCTGGCGCCATTGGAGGCACTCGCGGCGCGTATCTGAGTGCCCGATACGA
GAGTCTCCGCGAGGAAACCGACTGGACAGTCCGCCAATATCTCAGAGGCC
AAACTTCCTTGAACCCGTTGGAATCCGAACAAGATGGAAAGATACATGAT
GAGCAGCTGCTGGCGCAGATTGTTTCGGAGCTCCGGCTGGAGGAATTACT
CGATATGCCGGTTGCCAACTTGAGCAATGGTCAGACCAGACGGACTCGGA
TTGCCAAGGCCCTCCTCAGTAAGCCTGAATTGCTCCTCCTTGATGATCCG
TTCATGGGCCTGGATCCCGCTACCGTTCGAAGCATCTCAGCCCTCCTCCG
GCGCTTGGCGGCCAAGTCTGATCCCCGCCTGGTTCTCGCTCTCCGGCCTC
AGGACCCCTTGCCCGACTGGGTCACGCATATTATGGTGCTGGGGAACTCC
CACCGGGTCCTTCTACAAGCTCCCCGCGCGGAAGCGGAGAAGGTGTTCAA
CGTATGGAAGAAGTTAGGCAGTTATGAGAAGCCGACTGCCAAAGAAGATC
AGTGGGTTCACCACACCTACGAACTGGCTAAGGAATACATCGATGCAGGC
CATCTCGATCGCCAACTCATATGGGACATGCGGCTAGCTCCGCCACAAGG
AAAGGGTCGCGCTGCCCCATCCTTCCCTATTAAGGGCGGTGAACCACTGA
TCGAAATGGACGGCGTCCGCGTACAATACGGTGATAAATGCGTCCTGGGC
GACTGGACCCAGCACGTGCACAACAAACCACAAGCTGGCCTGCACTGGAC
AGTTCGGCGCGGGCAACGCTGGGCCGTGCTCGGTGCCAACGGCTCCGGCA
AAACCACTCTGCTCTCTCTCATAACCTCGGACCATCCCCAAACCTACGCT
CTTCCTATCCGTCTCTTCGGCCGCACCCGACTCCCCGAAGCTGGGAGACC
AGGCCTCTCGATCTTCGAGCTCCAATCCCGCCTCGGCCACTCTTCTCCCG
AAATCCATGCCTTCTTCCCCCGTCAACTGACCATCCGACAAGCCATTGAA
TCAGCTTTCGCGGAAACCTTCCTCGCTAAACCCACTCTGAATCATGATCG
TGACCTGGACGTCAGCGCCATCCTCCGCTTCTTCCGCGCCGAACTCGACC
CCGACGTCTCCAACATCTCCCAAAAACCTACCAAAGTCACCACTCCCCGC
GATCTCTTCCCCACCCTCGTCAAATCTGACACCGACTTCTACAATCCCGA
CCACGGTGTTGAGTACGCCGACACGGTTCGCTTCGCTGAGCTTAGCACTG
CTCAACAGCGCCTGGTCCTGTTTCTTCGCACTCTCGTTCACCGACCTGAT
ATCGTCATCTTAGACGAAGCCTTCTCCGGCATGCCTGCCTCCATCCGGGA
CAAGTGTCTAAACTTCATCGAACATGGCGAGTTCGTCACTAAACGAGTTG
TCAAAGTCCACCCTGCACCCGAGGATGCTCGGTTCCGTGGACTCACGGAT
GACCAAGCTTTGGTCATGATCTCCCATGTGAAGGAGGAAATTCCTCCCAG
TGTGCGCTACTTCATGCGGCTACCTTCCGATGCGGGGGAGTCGTTAGATT
TTAGGTTTGGCACACTAAAGCCGGGGAGTAGACTGAGCGAGCCAGTAGTT
TGGGATAAGGCTTGGGCAGCGAATTTCCAGGAAGGTGCGGTACGTGCGGA
GGTTGAGAGTGTGGCGGAAGGGGAGACGGTGCGGGAAGATTTTGAAAGAT
TCGAGTGGTACTCTATATGA back to topCoding sequence (CDS) from alignment at NKJJ01000008.1:947736..949655+ >CAN33_29670-T1 ID=CAN33_29670-T1|Name=CAN33_29670-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1920bp|location=Sequence derived from alignment at NKJJ01000008.1:947736..949655+ (Aspergillus niger FDAARGOS_311)
ATGCTCGACGTTCTTCGTGGTCAATACATTTGCACACCGCCCACAGCGCG
CAGCTATCCGTACCTCCTCAGCGACGAGATCGCCGAAAAGGATCACCGCC
TCCGGTTTGCGGGCAACGCAATACAATACATTGGCTTCAGTGGGGAAGGT
TCTGGCGCCATTGGAGGCACTCGCGGCGCGTATCTGAGTGCCCGATACGA
GAGTCTCCGCGAGGAAACCGACTGGACAGTCCGCCAATATCTCAGAGGCC
AAACTTCCTTGAACCCGTTGGAATCCGAACAAGATGGAAAGATACATGAT
GAGCAGCTGCTGGCGCAGATTGTTTCGGAGCTCCGGCTGGAGGAATTACT
CGATATGCCGGTTGCCAACTTGAGCAATGGTCAGACCAGACGGACTCGGA
TTGCCAAGGCCCTCCTCAGTAAGCCTGAATTGCTCCTCCTTGATGATCCG
TTCATGGGCCTGGATCCCGCTACCGTTCGAAGCATCTCAGCCCTCCTCCG
GCGCTTGGCGGCCAAGTCTGATCCCCGCCTGGTTCTCGCTCTCCGGCCTC
AGGACCCCTTGCCCGACTGGGTCACGCATATTATGGTGCTGGGGAACTCC
CACCGGGTCCTTCTACAAGCTCCCCGCGCGGAAGCGGAGAAGGTGTTCAA
CGTATGGAAGAAGTTAGGCAGTTATGAGAAGCCGACTGCCAAAGAAGATC
AGTGGGTTCACCACACCTACGAACTGGCTAAGGAATACATCGATGCAGGC
CATCTCGATCGCCAACTCATATGGGACATGCGGCTAGCTCCGCCACAAGG
AAAGGGTCGCGCTGCCCCATCCTTCCCTATTAAGGGCGGTGAACCACTGA
TCGAAATGGACGGCGTCCGCGTACAATACGGTGATAAATGCGTCCTGGGC
GACTGGACCCAGCACGTGCACAACAAACCACAAGCTGGCCTGCACTGGAC
AGTTCGGCGCGGGCAACGCTGGGCCGTGCTCGGTGCCAACGGCTCCGGCA
AAACCACTCTGCTCTCTCTCATAACCTCGGACCATCCCCAAACCTACGCT
CTTCCTATCCGTCTCTTCGGCCGCACCCGACTCCCCGAAGCTGGGAGACC
AGGCCTCTCGATCTTCGAGCTCCAATCCCGCCTCGGCCACTCTTCTCCCG
AAATCCATGCCTTCTTCCCCCGTCAACTGACCATCCGACAAGCCATTGAA
TCAGCTTTCGCGGAAACCTTCCTCGCTAAACCCACTCTGAATCATGATCG
TGACCTGGACGTCAGCGCCATCCTCCGCTTCTTCCGCGCCGAACTCGACC
CCGACGTCTCCAACATCTCCCAAAAACCTACCAAAGTCACCACTCCCCGC
GATCTCTTCCCCACCCTCGTCAAATCTGACACCGACTTCTACAATCCCGA
CCACGGTGTTGAGTACGCCGACACGGTTCGCTTCGCTGAGCTTAGCACTG
CTCAACAGCGCCTGGTCCTGTTTCTTCGCACTCTCGTTCACCGACCTGAT
ATCGTCATCTTAGACGAAGCCTTCTCCGGCATGCCTGCCTCCATCCGGGA
CAAGTGTCTAAACTTCATCGAACATGGCGAGTTCGTCACTAAACGAGTTG
TCAAAGTCCACCCTGCACCCGAGGATGCTCGGTTCCGTGGACTCACGGAT
GACCAAGCTTTGGTCATGATCTCCCATGTGAAGGAGGAAATTCCTCCCAG
TGTGCGCTACTTCATGCGGCTACCTTCCGATGCGGGGGAGTCGTTAGATT
TTAGGTTTGGCACACTAAAGCCGGGGAGTAGACTGAGCGAGCCAGTAGTT
TGGGATAAGGCTTGGGCAGCGAATTTCCAGGAAGGTGCGGTACGTGCGGA
GGTTGAGAGTGTGGCGGAAGGGGAGACGGTGCGGGAAGATTTTGAAAGAT
TCGAGTGGTACTCTATATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016887 | ATPase activity |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000081.7 |
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09262G8Y |
| Note | SMCOG1288:ABC transporter related protein |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003439 |
| DBxref | InterPro:IPR003593 |
| Product | ABC transporter family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000008.1 | supercontig | NKJJ01000008.1:947736..949655 + |
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