|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1856637..1857971- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2975-T1 ID=CAN33_2975-T1|Name=CAN33_2975-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1335bp|location=Sequence derived from alignment at NKJJ01000004.1:1856637..1857971- (Aspergillus niger FDAARGOS_311)
ATGGCTTCCACAACCTCGGCCCCCTCATCGCAGCCAACGGCTTCCTCAAA
CCTAACGGTTTTGCCTCCTATAATCACAGGCTCCCCAGTTAAGCGGCAGG
GCCGTCAGCGATCCTCCTCGTACGCGAAGGATCGTCTCTCAACGCACTCT
AATGTTTCCTTAGCTTCTCAGAATCGGTCGCGGCCGGGATCCCACGTCTT
TCCTGTCTTTCATTCCAGCTTACCGTATGCGCTGGTTCGCGACTTTGCGT
ATCCTCCTATCCATCCTCTTCACTACGGCCCATTGCCGCCTCGTGCATCG
GTAGTATCCACCCCGGCAAGTGAGCAACGGCGCCTGTCCGATCCTCCGGC
CCCATGGGACAGTTCTCGTGGCCAATGGTCCGTGGGACCGTGGACTACCG
ACCATAGCTATGGGCATCAGCAACTTCCCGCCATGTCCTTTGGCGATGGA
CCGCCGTATAGCGAGGATGAAGACTTGCACAGCCCAGTCTTTTCCGCCCC
CCGTCACCGGAAAAACAAGTCCACCGGAACGGACCTTAATGGACGGAAAG
CCAGGGGCCCTGGTGGCCGTGAGCATCAAGGCATGAGCTATGAGGCGGAT
ACCGATCGGGGTACGCTTGTCAGTATGAACGCGGACGGCAGTGAGACGTA
CTATGTAAACGATGACGACGCTTTGGAGGATGGACCGGGCGGCGAGTATG
TCACCTATCCGGCGAACGAAAGCCGGTATTCTCACGTGGGCTCATATGGC
GACTATCAAGCCTATGGACATGATGCGGACTTTGATTCTGAAGACGACTA
TGCTGGGGATCATCGGTACTCGCGTGACTTCCAGTTTGCTGTGGGATGCC
CTGATGAGGAGATGCACGGAAAAGCGGTTGCGCTGTTCGATTTCACAAGA
GAGCATGAGAACGAGCTGCCTCTTACTGAAGGACAGGTTATCTTCGTCTC
ATACCGGCACGGTCAGGGCTGGCTTGTTGCGGAGGATCCCAAGACTGGGG
AGAGCGGGCTGGTACCAGAGGAGTTTGTGCGTCTGCTTCGAGATATCGAG
GGAGGGCTGACGTCGTTGAACGGCGAGCCTGATGCGGACGAAGAGAACAA
TACGTACCTGAGCCCGGAGTCGACAGACTCCCAGCAAGCTATTACACCCA
CGCAAGACGAACAGCTCCCACTAGAATCGACCTACGTTAGCGTCGAGCAT
GTCTCCAACGGGGAGAAGAGGAAGTCTTCCCATCTGTCTAGCGGTGGCAA
GACGGATTCGAACATGTCACATTTCCCGGCAGAAGATCAGGGGCTTGAAG
CCCCGCAAGACCTTCCTGAAAAGAAGGTGGCCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1856637..1857971- >CAN33_2975-T1 ID=CAN33_2975-T1|Name=CAN33_2975-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1335bp|location=Sequence derived from alignment at NKJJ01000004.1:1856637..1857971- (Aspergillus niger FDAARGOS_311)
ATGGCTTCCACAACCTCGGCCCCCTCATCGCAGCCAACGGCTTCCTCAAA
CCTAACGGTTTTGCCTCCTATAATCACAGGCTCCCCAGTTAAGCGGCAGG
GCCGTCAGCGATCCTCCTCGTACGCGAAGGATCGTCTCTCAACGCACTCT
AATGTTTCCTTAGCTTCTCAGAATCGGTCGCGGCCGGGATCCCACGTCTT
TCCTGTCTTTCATTCCAGCTTACCGTATGCGCTGGTTCGCGACTTTGCGT
ATCCTCCTATCCATCCTCTTCACTACGGCCCATTGCCGCCTCGTGCATCG
GTAGTATCCACCCCGGCAAGTGAGCAACGGCGCCTGTCCGATCCTCCGGC
CCCATGGGACAGTTCTCGTGGCCAATGGTCCGTGGGACCGTGGACTACCG
ACCATAGCTATGGGCATCAGCAACTTCCCGCCATGTCCTTTGGCGATGGA
CCGCCGTATAGCGAGGATGAAGACTTGCACAGCCCAGTCTTTTCCGCCCC
CCGTCACCGGAAAAACAAGTCCACCGGAACGGACCTTAATGGACGGAAAG
CCAGGGGCCCTGGTGGCCGTGAGCATCAAGGCATGAGCTATGAGGCGGAT
ACCGATCGGGGTACGCTTGTCAGTATGAACGCGGACGGCAGTGAGACGTA
CTATGTAAACGATGACGACGCTTTGGAGGATGGACCGGGCGGCGAGTATG
TCACCTATCCGGCGAACGAAAGCCGGTATTCTCACGTGGGCTCATATGGC
GACTATCAAGCCTATGGACATGATGCGGACTTTGATTCTGAAGACGACTA
TGCTGGGGATCATCGGTACTCGCGTGACTTCCAGTTTGCTGTGGGATGCC
CTGATGAGGAGATGCACGGAAAAGCGGTTGCGCTGTTCGATTTCACAAGA
GAGCATGAGAACGAGCTGCCTCTTACTGAAGGACAGGTTATCTTCGTCTC
ATACCGGCACGGTCAGGGCTGGCTTGTTGCGGAGGATCCCAAGACTGGGG
AGAGCGGGCTGGTACCAGAGGAGTTTGTGCGTCTGCTTCGAGATATCGAG
GGAGGGCTGACGTCGTTGAACGGCGAGCCTGATGCGGACGAAGAGAACAA
TACGTACCTGAGCCCGGAGTCGACAGACTCCCAGCAAGCTATTACACCCA
CGCAAGACGAACAGCTCCCACTAGAATCGACCTACGTTAGCGTCGAGCAT
GTCTCCAACGGGGAGAAGAGGAAGTCTTCCCATCTGTCTAGCGGTGGCAA
GACGGATTCGAACATGTCACATTTCCCGGCAGAAGATCAGGGGCTTGAAG
CCCCGCAAGACCTTCCTGAAAAGAAGGTGGCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036028 |
| DBxref | InterPro:IPR001452 |
| DBxref | PFAM:PF14604 |
| DBxref | PFAM:PF07653 |
| DBxref | PFAM:PF00018 |
| Product | SH3 domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1856637..1857971 - |
|
