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CAN33_29815-T1, CAN33_29815-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29815-T1
Unique NameCAN33_29815-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:66595..67379-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29815-T1 ID=CAN33_29815-T1|Name=CAN33_29815-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=785bp|location=Sequence derived from alignment at NKJJ01000003.1:66595..67379- (Aspergillus niger FDAARGOS_311)
ATGGCCGCCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGTACGTC
ACTAGCACCTTTTTACGCATATCTTATCCATTATCCCAATGGAAACCCTA
GGAGCCGTTTCGCGCCTCGTCTTCCCCGGCTAATGTTACGACTACCTCAA
CAGGCACCCAGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCT
CAGTTCTCCCGTGACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAGGT
ACGAACCCTGAACGCAAGGTCTGGGTCATGTTTTCGTGCTAATCTCAAAT
CACCTGCTTAGTACGCCGGCTATGCCAACACCAAGGTACTTTACCCGCGC
TTCATGCCATAGAGATTCTTCTGTCAGGGATTGGATGTTTAACGCTGCAA
CAACAGGCGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCTGTCAT
CACCAAGAAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGTTACCG
TGACCTACGGCCCTAACGCCTCCACCCGCAAGTAAGTCAATATGAGCAGT
TGGCGTGCTGTGATGTCCGTGAGGGAGGCGCGACAGTCTGCTGATACTGC
TCTCGCATAGGATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGC
TACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCG
CCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTG
CTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:66595..67379-

>CAN33_29815-T1 ID=CAN33_29815-T1|Name=CAN33_29815-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2310bp|location=Sequence derived from alignment at NKJJ01000003.1:66595..67379- (Aspergillus niger FDAARGOS_311)
GATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTG
ATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAG
AAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAG
AAAGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGA
ACGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCT
GCCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAA
TACGCCGGCTATGCCAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAG
CGTAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCA
GAACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCT
GGCAGCTCACCCGATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACG
GCTACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATC
CGCCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGG
TGCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCC
AGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAAC
CCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGC
CTCCACCCGCAATACGCCGGCTATGCCAACACCAAGGCACCCAGAATGCT
TTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCC
CCTGAACTTGCAGAACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCA
GCGACCTCATCTGGCAGCTCACCCGATCTACAAGGGTGTTGCCGACAAGA
CTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGC
GTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCA
GAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAAG
CGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAG
AAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTA
CGGCCCTAACGCCTCCACCCGCAATACGCCGGCTATGCCAACACCAAGGC
ACCCAGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTT
CTCCCGTGACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAGATGGCCG
CCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGATCTACAAGGGTG
TTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGAC
GCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGA
GACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGA
AGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCT
GTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGT
TACCGTGACCTACGGCCCTAACGCCTCCACCCGCAATACGCCGGCTATGC
CAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGG
TGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCAGAACAAGCACTCTT
TCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGA
TCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGAT
ATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGAA
GGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGAA
AGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGAAC
GGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTGC
CAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAATA
CGCCGGCTATGCCAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAGCG
TAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCAGA
ACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCTGG
CAGCTCACCC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29815CAN33_29815Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29815-T1CAN33_29815-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29815-T1.cdsCAN33_29815-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29815-T1.exon5CAN33_29815-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_29815-T1.exon4CAN33_29815-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_29815-T1.exon3CAN33_29815-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_29815-T1.exon2CAN33_29815-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29815-T1.exon1CAN33_29815-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR029004
DBxrefPFAM:PF01778
ProductRibosomal L28e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:66595..67379 -
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