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CAN33_29825-T1, CAN33_29825-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29825-T1
Unique NameCAN33_29825-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:69031..70235-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29825-T1 ID=CAN33_29825-T1|Name=CAN33_29825-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1205bp|location=Sequence derived from alignment at NKJJ01000003.1:69031..70235- (Aspergillus niger FDAARGOS_311)
ATGTCTGGCGCAAGGCATTGGTAAGTGCTTCTCTTTACTCCATGTGATAT
GAATCCCAGTCATATCGGTCCTGACAATTGCTGGAATAGGGAGCAAGACA
AAGAGGCCACCGTCTACATCGGAAACCTCGATGAACGGGTTACAGATAGC
CTGGTATGGGAGCTGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCT
ACCGAAAGACCGAGTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAAT
TCATCAGCGAGGAAGATGCCGAATACGCGTCACGAATCATGAACGGAATC
CGCCTGTATGGAAAGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCA
AAAGTCGGTGGAGATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTA
TGGTTACGGAGCAAGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTG
GTCAATATCCCCAAGGTAGGACTTTATCCTTTCTATAGGCCTGTCATGCG
GCACCGTGTCTCGGAGGGGAACTTACTAACCATGGCTGCTACTAGATTGC
GCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTTCGCCG
ACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAATATCTT
ATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGGAAAGG
TGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGCTCGCA
AACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCTCAAAC
CCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGCTCTCG
GCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTATGGCTC
CTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCCGACCC
GTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCACGGCC
GCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCCACCAG
GATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCACCTCCG
CCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCTGGTCC
CCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCGCGGGC
GTTGA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:69031..70235-

>CAN33_29825-T1 ID=CAN33_29825-T1|Name=CAN33_29825-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3168bp|location=Sequence derived from alignment at NKJJ01000003.1:69031..70235- (Aspergillus niger FDAARGOS_311)
ATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTT
CGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAAT
ATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGG
AAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGC
TCGCAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCT
CAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGC
TCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTAT
GGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCC
GACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCA
CGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCC
ACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCAC
CTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCT
GGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCG
CGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTACATCGGAAACCTC
GATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGATGCTGCAGGCCGG
GCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCACACAGTCGCATC
AGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGATGCCGAATACGCG
TCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCCCATCCGCGTCAA
CAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTGGGGCAGAGCTAT
TCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTTCTTTATGACACA
TTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGATGTCTGGCGCAAG
GCATTGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGT
GTCGTTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACG
GCCAATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAA
GATGGGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGC
ACAAGCTCGCAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCAC
AATTCTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGT
GATAGCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAG
AGGTATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAG
CAAGCCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTA
CCAGCACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTT
CCTCCCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAG
CAGCACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGA
ACACCTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTA
TGCGCGCGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTACATCGGA
AACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGATGCTGCA
GGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCACACAGT
CGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGATGCCGAA
TACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCCCATCCG
CGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTGGGGCAG
AGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTTCTTTAT
GACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGATGTCTGG
CGCAAGGCATTGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGG
ATTTGTGTCGTTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACA
TGAACGGCCAATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTAT
AAGAAAGATGGGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCT
GGCTGCACAAGCTCGCAAACATAACGTGCGCCCACCAACCCAGCCGCTAC
CTCCACAATTCTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCC
AACGGTGATAGCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATAT
GGGCAGAGGTATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTC
CACAAGCAAGCCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCA
GGTTTACCAGCACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCA
GTCCTTCCTCCCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCC
CTCAAGCAGCACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCG
GCAGGAACACCTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACC
TGGCTATGCGCGCGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTAC
ATCGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGAT
GCTGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCA
CACAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGAT
GCCGAATACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCC
CATCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTG
GGGCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTT
CTTTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGAT
GTCTGGCGCAAGGCATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29825CAN33_29825Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29825-T1CAN33_29825-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29825-T1.cdsCAN33_29825-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29825-T1.exon3CAN33_29825-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_29825-T1.exon2CAN33_29825-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29825-T1.exon1CAN33_29825-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034158
DBxrefInterPro:IPR034159
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF13893
DBxrefPFAM:PF00076
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:69031..70235 -
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