You are here

Home

CAN33_29835-T1, CAN33_29835-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29835-T1
Unique NameCAN33_29835-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:71554..72891+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29835-T1 ID=CAN33_29835-T1|Name=CAN33_29835-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1338bp|location=Sequence derived from alignment at NKJJ01000003.1:71554..72891+ (Aspergillus niger FDAARGOS_311)
ATGAACTTGAATCTTAGCTCCAGCTCAAATCCGGACCGAATCCGGACCTC
TTTAATCCTCCCGACACTTCCGGCTAGAATCTCAAACACCTGCAAGCGGC
ACATTCCAGGAGGACTCGAAGGGTTAATGACTGGCAAGGATGGCTTGTCC
TCGTCCTTTGTGGAGACCGTAGCGGGATTCACGGCCGGAATCGCTTCGAC
GCTCTGCCTGCATCCGCTAGATCTGATCAAGACTCGACTTCAAGGTTAGT
GGTTCATCTCTCGAGGAAGAAGACAAGTCGCGAAGCGCGGATCAATCTCC
AATATTTGATCAGCATTCAAATTATGACTAACGCAGTATCAATCTGCCAT
ATTTTCTAGTCGACCGGTTACCCTCTTCACGAGTCGGCGGTTCAGTCCCA
GTGATTCGCGAGATCTTTCAGAATGAGGGCGGCATTAAAGCCTTTTACAG
AGGCCTGACACCCAACATATTTGGGAATTCCACAAGTTGGGCGCTCTACT
TCTTGTGCTACGGCAACATCAAGGGCGTGATGCGCAGCTGGCGTAGTGGT
TCTCAAGACCAGGCCCTCACCTCGGCCGACTACTTCCTAGCCTCAGGATC
CGCAGGTACGCTCCAGAAGCAGAAAAGAAACAGACCTGCGATGTTTTCTC
CCAAGAAAGCACCGGGTATGCAGTTCCGAAGCGGGAGATGAGGCTAATTC
ACGGAATTTTGATTCTCACAGGGATGTTGACATCCGCGCTAACCAATCCG
ATCTGGGTGATAAAAACCCGCATGCTGTCGACGGGATCCCAGAGCCCCGG
GGCATACGCGTCGTTCACGACGGGTGCGAAGGAAATTCTTCGCTCGGAGG
GTATTGCGGGCTTTTATCGGGGTCTGGTTCCAGCCCTGTTTGGAGTCAGC
CATGGTGCACTTCAATTCATGGCGTATGAGCAGTTGAAACTGCATCGCTC
CCGGATGGCTCCTTCGGCCGGAACAACCGGCGTTCGACGGGATGCTGATT
GGAGCCATGTGTCGTCGTCGGACGCGGCCCGGTCGGGGATACGGGAGCTG
GGAAATGTGGACTTATTCGTGATCTCGAGCTTGTCAAAACTATTCGCCGG
GTGTGTTACCTATCCGTATCAGGTGTTGCGGTCTCGTTTACAGACATATG
ATGCTCACCTCGTGTATTCGGGCGTCAGGGATGCCGTTGCTCAGATTTGG
GCTAGAGAAGGTATCACTGGCTTCTATAAGGGTCTTGGCCCCAATTTGCT
GCGCGTGTTGCCCAGTACGTGGGTCACTTTCCTGGTGTATGAAAATACAA
GAGCGTATCTACCAAGGTTGTTTTCCAACCTTCGATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:71554..72891+

>CAN33_29835-T1 ID=CAN33_29835-T1|Name=CAN33_29835-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3321bp|location=Sequence derived from alignment at NKJJ01000003.1:71554..72891+ (Aspergillus niger FDAARGOS_311)
ATGAACTTGAATCTTAGCTCCAGCTCAAATCCGGACCGAATCCGGACCTC
TTTAATCCTCCCGACACTTCCGGCTAGAATCTCAAACACCTGCAAGCGGC
ACATTCCAGGAGGACTCGAAGGGTTAATGACTGGCAAGGATGGCTTGTCC
TCGTCCTTTGTGGAGACCGTAGCGGGATTCACGGCCGGAATCGCTTCGAC
GCTCTGCCTGCATCCGCTAGATCTGATCAAGACTCGACTTCAAGTCGACC
GGTTACCCTCTTCACGAGTCGGCGGTTCAGTCCCAGTGATTCGCGAGATC
TTTCAGAATGAGGGCGGCATTAAAGCCTTTTACAGAGGCCTGACACCCAA
CATATTTGGGAATTCCACAAGTTGGGCGCTCTACTTCTTGTGCTACGGCA
ACATCAAGGGCGTGATGCGCAGCTGGCGTAGTGGTTCTCAAGACCAGGCC
CTCACCTCGGCCGACTACTTCCTAGCCTCAGGATCCGCAGGGATGTTGAC
ATCCGCGCTAACCAATCCGATCTGGGTGATAAAAACCCGCATGCTGTCGA
CGGGATCCCAGAGCCCCGGGGCATACGCGTCGTTCACGACGGGTGCGAAG
GAAATTCTTCGCTCGGAGGGTATTGCGGGCTTTTATCGGGGTCTGGTTCC
AGCCCTGTTTGGAGTCAGCCATGGTGCACTTCAATTCATGGCGTATGAGC
AGTTGAAACTGCATCGCTCCCGGATGGCTCCTTCGGCCGGAACAACCGGC
GTTCGACGGGATGCTGATTGGAGCCATGTGTCGTCGTCGGACGCGGCCCG
GTCGGGGATACGGGAGCTGGGAAATGTGGACTTATTCGTGATCTCGAGCT
TGTCAAAACTATTCGCCGGGTGTGTTACCTATCCGTATCAGGTGTTGCGG
TCTCGTTTACAGACATATGATGCTCACCTCGTGTATTCGGGCGTCAGGGA
TGCCGTTGCTCAGATTTGGGCTAGAGAAGGTATCACTGGCTTCTATAAGG
GTCTTGGCCCCAATTTGCTGCGCGTGTTGCCCAGTACGTGGGTCACTTTC
CTGGTGTATGAAAATACAAGAGCGTATCTACCAAGGTTGTTTTCCAACCT
TCGATAGATGAACTTGAATCTTAGCTCCAGCTCAAATCCGGACCGAATCC
GGACCTCTTTAATCCTCCCGACACTTCCGGCTAGAATCTCAAACACCTGC
AAGCGGCACATTCCAGGAGGACTCGAAGGGTTAATGACTGGCAAGGATGG
CTTGTCCTCGTCCTTTGTGGAGACCGTAGCGGGATTCACGGCCGGAATCG
CTTCGACGCTCTGCCTGCATCCGCTAGATCTGATCAAGACTCGACTTCAA
GTCGACCGGTTACCCTCTTCACGAGTCGGCGGTTCAGTCCCAGTGATTCG
CGAGATCTTTCAGAATGAGGGCGGCATTAAAGCCTTTTACAGAGGCCTGA
CACCCAACATATTTGGGAATTCCACAAGTTGGGCGCTCTACTTCTTGTGC
TACGGCAACATCAAGGGCGTGATGCGCAGCTGGCGTAGTGGTTCTCAAGA
CCAGGCCCTCACCTCGGCCGACTACTTCCTAGCCTCAGGATCCGCAGGGA
TGTTGACATCCGCGCTAACCAATCCGATCTGGGTGATAAAAACCCGCATG
CTGTCGACGGGATCCCAGAGCCCCGGGGCATACGCGTCGTTCACGACGGG
TGCGAAGGAAATTCTTCGCTCGGAGGGTATTGCGGGCTTTTATCGGGGTC
TGGTTCCAGCCCTGTTTGGAGTCAGCCATGGTGCACTTCAATTCATGGCG
TATGAGCAGTTGAAACTGCATCGCTCCCGGATGGCTCCTTCGGCCGGAAC
AACCGGCGTTCGACGGGATGCTGATTGGAGCCATGTGTCGTCGTCGGACG
CGGCCCGGTCGGGGATACGGGAGCTGGGAAATGTGGACTTATTCGTGATC
TCGAGCTTGTCAAAACTATTCGCCGGGTGTGTTACCTATCCGTATCAGGT
GTTGCGGTCTCGTTTACAGACATATGATGCTCACCTCGTGTATTCGGGCG
TCAGGGATGCCGTTGCTCAGATTTGGGCTAGAGAAGGTATCACTGGCTTC
TATAAGGGTCTTGGCCCCAATTTGCTGCGCGTGTTGCCCAGTACGTGGGT
CACTTTCCTGGTGTATGAAAATACAAGAGCGTATCTACCAAGGTTGTTTT
CCAACCTTCGATAGATGAACTTGAATCTTAGCTCCAGCTCAAATCCGGAC
CGAATCCGGACCTCTTTAATCCTCCCGACACTTCCGGCTAGAATCTCAAA
CACCTGCAAGCGGCACATTCCAGGAGGACTCGAAGGGTTAATGACTGGCA
AGGATGGCTTGTCCTCGTCCTTTGTGGAGACCGTAGCGGGATTCACGGCC
GGAATCGCTTCGACGCTCTGCCTGCATCCGCTAGATCTGATCAAGACTCG
ACTTCAAGTCGACCGGTTACCCTCTTCACGAGTCGGCGGTTCAGTCCCAG
TGATTCGCGAGATCTTTCAGAATGAGGGCGGCATTAAAGCCTTTTACAGA
GGCCTGACACCCAACATATTTGGGAATTCCACAAGTTGGGCGCTCTACTT
CTTGTGCTACGGCAACATCAAGGGCGTGATGCGCAGCTGGCGTAGTGGTT
CTCAAGACCAGGCCCTCACCTCGGCCGACTACTTCCTAGCCTCAGGATCC
GCAGGGATGTTGACATCCGCGCTAACCAATCCGATCTGGGTGATAAAAAC
CCGCATGCTGTCGACGGGATCCCAGAGCCCCGGGGCATACGCGTCGTTCA
CGACGGGTGCGAAGGAAATTCTTCGCTCGGAGGGTATTGCGGGCTTTTAT
CGGGGTCTGGTTCCAGCCCTGTTTGGAGTCAGCCATGGTGCACTTCAATT
CATGGCGTATGAGCAGTTGAAACTGCATCGCTCCCGGATGGCTCCTTCGG
CCGGAACAACCGGCGTTCGACGGGATGCTGATTGGAGCCATGTGTCGTCG
TCGGACGCGGCCCGGTCGGGGATACGGGAGCTGGGAAATGTGGACTTATT
CGTGATCTCGAGCTTGTCAAAACTATTCGCCGGGTGTGTTACCTATCCGT
ATCAGGTGTTGCGGTCTCGTTTACAGACATATGATGCTCACCTCGTGTAT
TCGGGCGTCAGGGATGCCGTTGCTCAGATTTGGGCTAGAGAAGGTATCAC
TGGCTTCTATAAGGGTCTTGGCCCCAATTTGCTGCGCGTGTTGCCCAGTA
CGTGGGTCACTTTCCTGGTGTATGAAAATACAAGAGCGTATCTACCAAGG
TTGTTTTCCAACCTTCGATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29835CAN33_29835Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29835-T1.exon1CAN33_29835-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29835-T1.exon2CAN33_29835-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29835-T1.exon3CAN33_29835-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29835-T1.cdsCAN33_29835-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29835-T1CAN33_29835-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
ProductMitochondrial carrier protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:71554..72891 +
Powered by Drupal