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CAN33_29840-T1, CAN33_29840-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29840-T1
Unique NameCAN33_29840-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:73426..74997-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29840-T1 ID=CAN33_29840-T1|Name=CAN33_29840-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1572bp|location=Sequence derived from alignment at NKJJ01000003.1:73426..74997- (Aspergillus niger FDAARGOS_311)
ATGGAAACCGCAGAACCAGTTTCATACGAATTCCCCGGCCACGCCGTTGG
GGCTGTTGCGCCTCGTCGAATGATGGGCTCGAATGTCGGCCACAACTTCC
CATTTTATACCAACCCGACTGGTGGCTATACACTTCCGTTTCATCAATCT
TCGTCACCAGCGTATAGCTTCGGACACACACTCAACCACCATCACCATCA
TCACCACCATCATCCGGGCTACCAGCATTACTTTGTAGCCGGCCAGCAGC
CGATCAATCCCCAGCCGGTCCGTCTATCCTCTGAGCCGCCATCCATCCAG
CAAATTCCCGATATTCGGCCGGCCAAGAATGCTGTTAATCGTGTAGCCAG
GGATCCTCTGATGAAGATCGAGCACAATGGGGCGTCACAGCAACCTCCCG
GGGCCCAGTCCTCGAGTAACGAAGAAGGTGCACAAGGGAAGAGCTCCAGC
TCCAATGAGGTGGAATTCTCGACAGAGGTAGATATCTTGATGAAGGCAAT
CCAGGCCAAAGCCAGTGCTCAGTCACCCGGAGTACAGTCTCTGCCGCCAC
TGCAACAATTGACACACGGGGGAAGCAATGGATACCCTCAGAGTTATTCA
ATGCCGGTGACGACCCCCCGGTGCACTGTTATGGTCGAAGAAGCCCCATC
GCGATCAGGCAAAAAACGCAAGTATGCTTGCACTTTACCGCAGTGCGGCA
AGAGCTTCGCGCAGAAGACGCATCTGGATATTCATATGCGGGCTCACACG
GGGGACAAGCCCTTTGTAGGTGGCATGAGAATAGACACTTATTGAAATAT
GACGCTAACCTAACCTTTCGTGCTAAGGTGTGCAAAGAGCCTTCATGTGG
ACAGCGCTTCTCTCAGTTGGGTAATCTGAAGGTGAGTTATTGGACGTTCG
GCAAAAAAGCCCCCTATAAGAAGAGCATCAACAGCATTGAAGATGTTGCA
GGCCGTCTAACAGAGACAATTGATAATTAGACTCATCAACGACGCCATAC
TGGAGAAAAGCCATTTTCTTGTGATATATGTCAGAAACGATTTGCTCAAC
GAGGCAACGTCCGTGCTCACAAGATCACCCATCAACATGCCAAACCATTC
ACTTGTCTCCTGGATGACTGCGGAAAGCAGTTCACCCAGCTTGGAAACCT
TAAGGTGCGGAGACCAATAATTCATCAACCCCGAAACCAATCCCCTCAAT
GATAGCTGACTGCTATAACAGTCACACCAGAACAAGTTCCATGCCACAAC
CCTACGAAATCTTACTATGAAATTCTCCCAAGTGACAGAGGGAGATCACA
TGAGCCCACAAGACAGAAAGCTCTGGGAATACTTTGCCACTTTGTATAAG
AACAGCAACAAAGGAATCAAGGGCCGCGGGAAAGATCGCAGGATCTCGCC
TACTTCACGGTCTGATCCTGGCTCCGAATCCCGCAGAAGGATCGAGCCAC
TCAGCAGCACTGATGACAAGATGCGCCGAGCAAGCTATGGAGATACATCT
ATGTATAACGGAGGTTCTAGCAGCGATGACGACGACGCAGAACCATACTT
TATTGAGAGGCAGGCTCATTGA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:73426..74997-

>CAN33_29840-T1 ID=CAN33_29840-T1|Name=CAN33_29840-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5865bp|location=Sequence derived from alignment at NKJJ01000003.1:73426..74997- (Aspergillus niger FDAARGOS_311)
TCACACCAGAACAAGTTCCATGCCACAACCCTACGAAATCTTACTATGAA
ATTCTCCCAAGTGACAGAGGGAGATCACATGAGCCCACAAGACAGAAAGC
TCTGGGAATACTTTGCCACTTTGTATAAGAACAGCAACAAAGGAATCAAG
GGCCGCGGGAAAGATCGCAGGATCTCGCCTACTTCACGGTCTGATCCTGG
CTCCGAATCCCGCAGAAGGATCGAGCCACTCAGCAGCACTGATGACAAGA
TGCGCCGAGCAAGCTATGGAGATACATCTATGTATAACGGAGGTTCTAGC
AGCGATGACGACGACGCAGAACCATACTTTATTGAGAGGCAGGCTCATTG
AAAACGATTTGCTCAACGAGGCAACGTCCGTGCTCACAAGATCACCCATC
AACATGCCAAACCATTCACTTGTCTCCTGGATGACTGCGGAAAGCAGTTC
ACCCAGCTTGGAAACCTTAAGGTGTGCAAAGAGCCTTCATGTGGACAGCG
CTTCTCTCAGTTGGGTAATCTGAAGCCGGCCAGCAGCCGATCAATCCCCA
GCCGGTCCGTCTATCCTCTGAGCCGCCATCCATCCAGCAAATTCCCGATA
TTCGGCCGGCCAAGAATGCTGTTAATCGTGTAGCCAGGGATCCTCTGATG
AAGATCGAGCACAATGGGGCGTCACAGCAACCTCCCGGGGCCCAGTCCTC
GAGTAACGAAGAAGGTGCACAAGGGAAGAGCTCCAGCTCCAATGAGGTGG
AATTCTCGACAGAGGTAGATATCTTGATGAAGGCAATCCAGGCCAAAGCC
AGTGCTCAGTCACCCGGAGTACAGTCTCTGCCGCCACTGCAACAATTGAC
ACACGGGGGAAGCAATGGATACCCTCAGAGTTATTCAATGCCGGTGACGA
CCCCCCGGTGCACTGTTATGGTCGAAGAAGCCCCATCGCGATCAGGCAAA
AAACGCAAGTATGCTTGCACTTTACCGCAGTGCGGCAAGAGCTTCGCGCA
GAAGACGCATCTGGATATTCATATGCGGGCTCACACGGGGGACAAGCCCT
TTATGGAAACCGCAGAACCAGTTTCATACGAATTCCCCGGCCACGCCGTT
GGGGCTGTTGCGCCTCGTCGAATGATGGGCTCGAATGTCGGCCACAACTT
CCCATTTTATACCAACCCGACTGTCACACCAGAACAAGTTCCATGCCACA
ACCCTACGAAATCTTACTATGAAATTCTCCCAAGTGACAGAGGGAGATCA
CATGAGCCCACAAGACAGAAAGCTCTGGGAATACTTTGCCACTTTGTATA
AGAACAGCAACAAAGGAATCAAGGGCCGCGGGAAAGATCGCAGGATCTCG
CCTACTTCACGGTCTGATCCTGGCTCCGAATCCCGCAGAAGGATCGAGCC
ACTCAGCAGCACTGATGACAAGATGCGCCGAGCAAGCTATGGAGATACAT
CTATGTATAACGGAGGTTCTAGCAGCGATGACGACGACGCAGAACCATAC
TTTATTGAGAGGCAGGCTCATTGAAAACGATTTGCTCAACGAGGCAACGT
CCGTGCTCACAAGATCACCCATCAACATGCCAAACCATTCACTTGTCTCC
TGGATGACTGCGGAAAGCAGTTCACCCAGCTTGGAAACCTTAAGGTGTGC
AAAGAGCCTTCATGTGGACAGCGCTTCTCTCAGTTGGGTAATCTGAAGCC
GGCCAGCAGCCGATCAATCCCCAGCCGGTCCGTCTATCCTCTGAGCCGCC
ATCCATCCAGCAAATTCCCGATATTCGGCCGGCCAAGAATGCTGTTAATC
GTGTAGCCAGGGATCCTCTGATGAAGATCGAGCACAATGGGGCGTCACAG
CAACCTCCCGGGGCCCAGTCCTCGAGTAACGAAGAAGGTGCACAAGGGAA
GAGCTCCAGCTCCAATGAGGTGGAATTCTCGACAGAGGTAGATATCTTGA
TGAAGGCAATCCAGGCCAAAGCCAGTGCTCAGTCACCCGGAGTACAGTCT
CTGCCGCCACTGCAACAATTGACACACGGGGGAAGCAATGGATACCCTCA
GAGTTATTCAATGCCGGTGACGACCCCCCGGTGCACTGTTATGGTCGAAG
AAGCCCCATCGCGATCAGGCAAAAAACGCAAGTATGCTTGCACTTTACCG
CAGTGCGGCAAGAGCTTCGCGCAGAAGACGCATCTGGATATTCATATGCG
GGCTCACACGGGGGACAAGCCCTTTATGGAAACCGCAGAACCAGTTTCAT
ACGAATTCCCCGGCCACGCCGTTGGGGCTGTTGCGCCTCGTCGAATGATG
GGCTCGAATGTCGGCCACAACTTCCCATTTTATACCAACCCGACTGTCAC
ACCAGAACAAGTTCCATGCCACAACCCTACGAAATCTTACTATGAAATTC
TCCCAAGTGACAGAGGGAGATCACATGAGCCCACAAGACAGAAAGCTCTG
GGAATACTTTGCCACTTTGTATAAGAACAGCAACAAAGGAATCAAGGGCC
GCGGGAAAGATCGCAGGATCTCGCCTACTTCACGGTCTGATCCTGGCTCC
GAATCCCGCAGAAGGATCGAGCCACTCAGCAGCACTGATGACAAGATGCG
CCGAGCAAGCTATGGAGATACATCTATGTATAACGGAGGTTCTAGCAGCG
ATGACGACGACGCAGAACCATACTTTATTGAGAGGCAGGCTCATTGAAAA
CGATTTGCTCAACGAGGCAACGTCCGTGCTCACAAGATCACCCATCAACA
TGCCAAACCATTCACTTGTCTCCTGGATGACTGCGGAAAGCAGTTCACCC
AGCTTGGAAACCTTAAGGTGTGCAAAGAGCCTTCATGTGGACAGCGCTTC
TCTCAGTTGGGTAATCTGAAGCCGGCCAGCAGCCGATCAATCCCCAGCCG
GTCCGTCTATCCTCTGAGCCGCCATCCATCCAGCAAATTCCCGATATTCG
GCCGGCCAAGAATGCTGTTAATCGTGTAGCCAGGGATCCTCTGATGAAGA
TCGAGCACAATGGGGCGTCACAGCAACCTCCCGGGGCCCAGTCCTCGAGT
AACGAAGAAGGTGCACAAGGGAAGAGCTCCAGCTCCAATGAGGTGGAATT
CTCGACAGAGGTAGATATCTTGATGAAGGCAATCCAGGCCAAAGCCAGTG
CTCAGTCACCCGGAGTACAGTCTCTGCCGCCACTGCAACAATTGACACAC
GGGGGAAGCAATGGATACCCTCAGAGTTATTCAATGCCGGTGACGACCCC
CCGGTGCACTGTTATGGTCGAAGAAGCCCCATCGCGATCAGGCAAAAAAC
GCAAGTATGCTTGCACTTTACCGCAGTGCGGCAAGAGCTTCGCGCAGAAG
ACGCATCTGGATATTCATATGCGGGCTCACACGGGGGACAAGCCCTTTAT
GGAAACCGCAGAACCAGTTTCATACGAATTCCCCGGCCACGCCGTTGGGG
CTGTTGCGCCTCGTCGAATGATGGGCTCGAATGTCGGCCACAACTTCCCA
TTTTATACCAACCCGACTGTCACACCAGAACAAGTTCCATGCCACAACCC
TACGAAATCTTACTATGAAATTCTCCCAAGTGACAGAGGGAGATCACATG
AGCCCACAAGACAGAAAGCTCTGGGAATACTTTGCCACTTTGTATAAGAA
CAGCAACAAAGGAATCAAGGGCCGCGGGAAAGATCGCAGGATCTCGCCTA
CTTCACGGTCTGATCCTGGCTCCGAATCCCGCAGAAGGATCGAGCCACTC
AGCAGCACTGATGACAAGATGCGCCGAGCAAGCTATGGAGATACATCTAT
GTATAACGGAGGTTCTAGCAGCGATGACGACGACGCAGAACCATACTTTA
TTGAGAGGCAGGCTCATTGAAAACGATTTGCTCAACGAGGCAACGTCCGT
GCTCACAAGATCACCCATCAACATGCCAAACCATTCACTTGTCTCCTGGA
TGACTGCGGAAAGCAGTTCACCCAGCTTGGAAACCTTAAGGTGTGCAAAG
AGCCTTCATGTGGACAGCGCTTCTCTCAGTTGGGTAATCTGAAGCCGGCC
AGCAGCCGATCAATCCCCAGCCGGTCCGTCTATCCTCTGAGCCGCCATCC
ATCCAGCAAATTCCCGATATTCGGCCGGCCAAGAATGCTGTTAATCGTGT
AGCCAGGGATCCTCTGATGAAGATCGAGCACAATGGGGCGTCACAGCAAC
CTCCCGGGGCCCAGTCCTCGAGTAACGAAGAAGGTGCACAAGGGAAGAGC
TCCAGCTCCAATGAGGTGGAATTCTCGACAGAGGTAGATATCTTGATGAA
GGCAATCCAGGCCAAAGCCAGTGCTCAGTCACCCGGAGTACAGTCTCTGC
CGCCACTGCAACAATTGACACACGGGGGAAGCAATGGATACCCTCAGAGT
TATTCAATGCCGGTGACGACCCCCCGGTGCACTGTTATGGTCGAAGAAGC
CCCATCGCGATCAGGCAAAAAACGCAAGTATGCTTGCACTTTACCGCAGT
GCGGCAAGAGCTTCGCGCAGAAGACGCATCTGGATATTCATATGCGGGCT
CACACGGGGGACAAGCCCTTTATGGAAACCGCAGAACCAGTTTCATACGA
ATTCCCCGGCCACGCCGTTGGGGCTGTTGCGCCTCGTCGAATGATGGGCT
CGAATGTCGGCCACAACTTCCCATTTTATACCAACCCGACTGTCACACCA
GAACAAGTTCCATGCCACAACCCTACGAAATCTTACTATGAAATTCTCCC
AAGTGACAGAGGGAGATCACATGAGCCCACAAGACAGAAAGCTCTGGGAA
TACTTTGCCACTTTGTATAAGAACAGCAACAAAGGAATCAAGGGCCGCGG
GAAAGATCGCAGGATCTCGCCTACTTCACGGTCTGATCCTGGCTCCGAAT
CCCGCAGAAGGATCGAGCCACTCAGCAGCACTGATGACAAGATGCGCCGA
GCAAGCTATGGAGATACATCTATGTATAACGGAGGTTCTAGCAGCGATGA
CGACGACGCAGAACCATACTTTATTGAGAGGCAGGCTCATTGAAAACGAT
TTGCTCAACGAGGCAACGTCCGTGCTCACAAGATCACCCATCAACATGCC
AAACCATTCACTTGTCTCCTGGATGACTGCGGAAAGCAGTTCACCCAGCT
TGGAAACCTTAAGGTGTGCAAAGAGCCTTCATGTGGACAGCGCTTCTCTC
AGTTGGGTAATCTGAAGCCGGCCAGCAGCCGATCAATCCCCAGCCGGTCC
GTCTATCCTCTGAGCCGCCATCCATCCAGCAAATTCCCGATATTCGGCCG
GCCAAGAATGCTGTTAATCGTGTAGCCAGGGATCCTCTGATGAAGATCGA
GCACAATGGGGCGTCACAGCAACCTCCCGGGGCCCAGTCCTCGAGTAACG
AAGAAGGTGCACAAGGGAAGAGCTCCAGCTCCAATGAGGTGGAATTCTCG
ACAGAGGTAGATATCTTGATGAAGGCAATCCAGGCCAAAGCCAGTGCTCA
GTCACCCGGAGTACAGTCTCTGCCGCCACTGCAACAATTGACACACGGGG
GAAGCAATGGATACCCTCAGAGTTATTCAATGCCGGTGACGACCCCCCGG
TGCACTGTTATGGTCGAAGAAGCCCCATCGCGATCAGGCAAAAAACGCAA
GTATGCTTGCACTTTACCGCAGTGCGGCAAGAGCTTCGCGCAGAAGACGC
ATCTGGATATTCATATGCGGGCTCACACGGGGGACAAGCCCTTTATGGAA
ACCGCAGAACCAGTTTCATACGAATTCCCCGGCCACGCCGTTGGGGCTGT
TGCGCCTCGTCGAATGATGGGCTCGAATGTCGGCCACAACTTCCCATTTT
ATACCAACCCGACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29840CAN33_29840Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29840-T1CAN33_29840-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29840-T1.cdsCAN33_29840-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29840-T1.exon5CAN33_29840-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_29840-T1.exon4CAN33_29840-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_29840-T1.exon3CAN33_29840-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_29840-T1.exon2CAN33_29840-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29840-T1.exon1CAN33_29840-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
ProductZinc finger C2H2 type family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:73426..74997 -
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