You are here

Home

CAN33_29865-T1, CAN33_29865-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29865-T1
Unique NameCAN33_29865-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:106144..107359-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29865-T1 ID=CAN33_29865-T1|Name=CAN33_29865-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1216bp|location=Sequence derived from alignment at NKJJ01000003.1:106144..107359- (Aspergillus niger FDAARGOS_311)
ATGTCCGACTCTCTAGCCTTGCCTTCCTTCCTCACGGACAATTCCGTGGC
CGCGGCCTTCAAGGATGCATACACCTCGTTCTCCGAGCGCAGGGCCGCCC
TCGGCCTTCCCAACCCTGGCACCTTGGACAACATCTCCCGGGAGGTGCAG
AAGGATGTCCTGCTGTCCAACTTCATGTTCACCGGTCTCCGGGCGGACCT
GACCAAGGTTTTCGGCATGTCTCCTCTCTTCCGTGTGTCGCACGCTTTCT
CCATGGGCGGATCCGGCAACATGCCCCCATACAACTTCTCCGCCATGTAC
GGAAGTCCAAAGGTAAGGTGCAATTGTTATATCTTACCTCTAGATATATA
TTATGTGTGGGTGACTAAAAAACTCTCGTTGGAACTCTAGGTCTTCATGC
AAGGCAACCTCGGAAGCGATGGAGGTCTCGCTGCTGTCGGCAACTACCGT
TGGACTCCCAAGTTCGTCACCAAGACCAATACTCAGATCATGCCCGGTGG
CCAGGGCTTGATGCAGCTTGATAATGACTACACTGGCGACGACTTCTCCG
CGTCTCTCAAGGCTTTCAACCCTTCTTACTTGGAGGGTGGTCTTACCGGA
ATCTTCGTCGGAAGCTACCTTCAGTCTGTTACTCCCAACCTGGCTCTTGG
CTTTGAGGCTATCTGGCAGCGCCAGGCCATGAACTCTCGTCCTGAATCTG
CTCTCTCCTACGGTGCCCGCTACAAGACCGCCGACTGGATTGCCAGTGCT
CAGCTGCAGGCTCAGGGTGTCATCACCGCCTCCTACTGGAAGAAGCTCTC
CGAGCGTGTTGAGGCTGGTGTTGACATGAACCTCCAGTTCGCGCCTAATG
CCGCTGCTGCTCTCATGGGTGGTCCCAGCCGTGACGGCACTACTGCCATT
GGTGCCAAGTACGACTTCCGTGCTTCCACTTTCCGTGCTCAGGTCGACAG
CACCGGAAAGGTTAGCTGCCTCCTGGAGAAGCGGATAGCTATGCCCATCG
CTCTTACTTTTGCCGGTGAGATCGATCAGGCCAAGGTGAGCTTCACTTCC
TGCAATGCTCTTTAATTCCAAATGGTAGATTAATAACTAATCTTTTTTTT
CTCTCTAGCAAACGGCCAAGCTCGGTCTTGCTGTTTCCCTTGAGATCGCG
GGCGAGGAACTGATGGAGCAGCAAGAGAAGATGAGCCCTGAGGACATGGT
CCCTCCTCCCTTCTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:106144..107359-

>CAN33_29865-T1 ID=CAN33_29865-T1|Name=CAN33_29865-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3195bp|location=Sequence derived from alignment at NKJJ01000003.1:106144..107359- (Aspergillus niger FDAARGOS_311)
CAAACGGCCAAGCTCGGTCTTGCTGTTTCCCTTGAGATCGCGGGCGAGGA
ACTGATGGAGCAGCAAGAGAAGATGAGCCCTGAGGACATGGTCCCTCCTC
CCTTCTAAGTCTTCATGCAAGGCAACCTCGGAAGCGATGGAGGTCTCGCT
GCTGTCGGCAACTACCGTTGGACTCCCAAGTTCGTCACCAAGACCAATAC
TCAGATCATGCCCGGTGGCCAGGGCTTGATGCAGCTTGATAATGACTACA
CTGGCGACGACTTCTCCGCGTCTCTCAAGGCTTTCAACCCTTCTTACTTG
GAGGGTGGTCTTACCGGAATCTTCGTCGGAAGCTACCTTCAGTCTGTTAC
TCCCAACCTGGCTCTTGGCTTTGAGGCTATCTGGCAGCGCCAGGCCATGA
ACTCTCGTCCTGAATCTGCTCTCTCCTACGGTGCCCGCTACAAGACCGCC
GACTGGATTGCCAGTGCTCAGCTGCAGGCTCAGGGTGTCATCACCGCCTC
CTACTGGAAGAAGCTCTCCGAGCGTGTTGAGGCTGGTGTTGACATGAACC
TCCAGTTCGCGCCTAATGCCGCTGCTGCTCTCATGGGTGGTCCCAGCCGT
GACGGCACTACTGCCATTGGTGCCAAGTACGACTTCCGTGCTTCCACTTT
CCGTGCTCAGGTCGACAGCACCGGAAAGGTTAGCTGCCTCCTGGAGAAGC
GGATAGCTATGCCCATCGCTCTTACTTTTGCCGGTGAGATCGATCAGGCC
AAGATGTCCGACTCTCTAGCCTTGCCTTCCTTCCTCACGGACAATTCCGT
GGCCGCGGCCTTCAAGGATGCATACACCTCGTTCTCCGAGCGCAGGGCCG
CCCTCGGCCTTCCCAACCCTGGCACCTTGGACAACATCTCCCGGGAGGTG
CAGAAGGATGTCCTGCTGTCCAACTTCATGTTCACCGGTCTCCGGGCGGA
CCTGACCAAGGTTTTCGGCATGTCTCCTCTCTTCCGTGTGTCGCACGCTT
TCTCCATGGGCGGATCCGGCAACATGCCCCCATACAACTTCTCCGCCATG
TACGGAAGTCCAAAGCAAACGGCCAAGCTCGGTCTTGCTGTTTCCCTTGA
GATCGCGGGCGAGGAACTGATGGAGCAGCAAGAGAAGATGAGCCCTGAGG
ACATGGTCCCTCCTCCCTTCTAAGTCTTCATGCAAGGCAACCTCGGAAGC
GATGGAGGTCTCGCTGCTGTCGGCAACTACCGTTGGACTCCCAAGTTCGT
CACCAAGACCAATACTCAGATCATGCCCGGTGGCCAGGGCTTGATGCAGC
TTGATAATGACTACACTGGCGACGACTTCTCCGCGTCTCTCAAGGCTTTC
AACCCTTCTTACTTGGAGGGTGGTCTTACCGGAATCTTCGTCGGAAGCTA
CCTTCAGTCTGTTACTCCCAACCTGGCTCTTGGCTTTGAGGCTATCTGGC
AGCGCCAGGCCATGAACTCTCGTCCTGAATCTGCTCTCTCCTACGGTGCC
CGCTACAAGACCGCCGACTGGATTGCCAGTGCTCAGCTGCAGGCTCAGGG
TGTCATCACCGCCTCCTACTGGAAGAAGCTCTCCGAGCGTGTTGAGGCTG
GTGTTGACATGAACCTCCAGTTCGCGCCTAATGCCGCTGCTGCTCTCATG
GGTGGTCCCAGCCGTGACGGCACTACTGCCATTGGTGCCAAGTACGACTT
CCGTGCTTCCACTTTCCGTGCTCAGGTCGACAGCACCGGAAAGGTTAGCT
GCCTCCTGGAGAAGCGGATAGCTATGCCCATCGCTCTTACTTTTGCCGGT
GAGATCGATCAGGCCAAGATGTCCGACTCTCTAGCCTTGCCTTCCTTCCT
CACGGACAATTCCGTGGCCGCGGCCTTCAAGGATGCATACACCTCGTTCT
CCGAGCGCAGGGCCGCCCTCGGCCTTCCCAACCCTGGCACCTTGGACAAC
ATCTCCCGGGAGGTGCAGAAGGATGTCCTGCTGTCCAACTTCATGTTCAC
CGGTCTCCGGGCGGACCTGACCAAGGTTTTCGGCATGTCTCCTCTCTTCC
GTGTGTCGCACGCTTTCTCCATGGGCGGATCCGGCAACATGCCCCCATAC
AACTTCTCCGCCATGTACGGAAGTCCAAAGCAAACGGCCAAGCTCGGTCT
TGCTGTTTCCCTTGAGATCGCGGGCGAGGAACTGATGGAGCAGCAAGAGA
AGATGAGCCCTGAGGACATGGTCCCTCCTCCCTTCTAAGTCTTCATGCAA
GGCAACCTCGGAAGCGATGGAGGTCTCGCTGCTGTCGGCAACTACCGTTG
GACTCCCAAGTTCGTCACCAAGACCAATACTCAGATCATGCCCGGTGGCC
AGGGCTTGATGCAGCTTGATAATGACTACACTGGCGACGACTTCTCCGCG
TCTCTCAAGGCTTTCAACCCTTCTTACTTGGAGGGTGGTCTTACCGGAAT
CTTCGTCGGAAGCTACCTTCAGTCTGTTACTCCCAACCTGGCTCTTGGCT
TTGAGGCTATCTGGCAGCGCCAGGCCATGAACTCTCGTCCTGAATCTGCT
CTCTCCTACGGTGCCCGCTACAAGACCGCCGACTGGATTGCCAGTGCTCA
GCTGCAGGCTCAGGGTGTCATCACCGCCTCCTACTGGAAGAAGCTCTCCG
AGCGTGTTGAGGCTGGTGTTGACATGAACCTCCAGTTCGCGCCTAATGCC
GCTGCTGCTCTCATGGGTGGTCCCAGCCGTGACGGCACTACTGCCATTGG
TGCCAAGTACGACTTCCGTGCTTCCACTTTCCGTGCTCAGGTCGACAGCA
CCGGAAAGGTTAGCTGCCTCCTGGAGAAGCGGATAGCTATGCCCATCGCT
CTTACTTTTGCCGGTGAGATCGATCAGGCCAAGATGTCCGACTCTCTAGC
CTTGCCTTCCTTCCTCACGGACAATTCCGTGGCCGCGGCCTTCAAGGATG
CATACACCTCGTTCTCCGAGCGCAGGGCCGCCCTCGGCCTTCCCAACCCT
GGCACCTTGGACAACATCTCCCGGGAGGTGCAGAAGGATGTCCTGCTGTC
CAACTTCATGTTCACCGGTCTCCGGGCGGACCTGACCAAGGTTTTCGGCA
TGTCTCCTCTCTTCCGTGTGTCGCACGCTTTCTCCATGGGCGGATCCGGC
AACATGCCCCCATACAACTTCTCCGCCATGTACGGAAGTCCAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005741mitochondrial outer membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008320protein transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29865CAN33_29865Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29865-T1CAN33_29865-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29865-T1.cdsCAN33_29865-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29865-T1.exon3CAN33_29865-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_29865-T1.exon2CAN33_29865-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29865-T1.exon1CAN33_29865-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09262M2J
DBxrefInterPro:IPR037930
DBxrefInterPro:IPR023614
DBxrefInterPro:IPR027246
DBxrefPFAM:PF01459
ProductEukaryotic porin family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:106144..107359 -
Powered by Drupal