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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:110823..111308- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_29875-T1 ID=CAN33_29875-T1|Name=CAN33_29875-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=486bp|location=Sequence derived from alignment at NKJJ01000003.1:110823..111308- (Aspergillus niger FDAARGOS_311)
ATGGCCACGAATTCTGGAGCCCCTGATCTGGGCAAAGATGGCTCCGGCTC
CATTGCTATCACCGTTGAGTTCACGTTCGGCTCTCACCCATATCATGCAA
GCACCCCAGGTTTGCACTCATTACTGATTCGGCTTTCGCAAACAGGGGAG
GTCTGGAGATCTTGTTTGCCAATGAGCGCAAACACCACGTCACGCTACCT
TCGCTTCTTGACGACGGCAGCCGGCCAACTATCAGCTACCTCCTGGGTCA
TCTGGTGAAGAACTACATGAAGGATCAGAGGCAGGAATTGTTCATACTGG
AAGGCAATGTGTACGTTCACCGTATGGGAATACACGGCAAGGCAAGAACA
CTGACGTTGGGCGAACAGTCGACCGGGAATCTTGGTTCTCATCAACGACG
CCGATTGGGAGCTCGAAGGCGAGGAGAACTACGAACTTCAACAAAATGAT
AACATTGTCTTCGTTTCTACGCTTCATGGGGGCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:110823..111308- >CAN33_29875-T1 ID=CAN33_29875-T1|Name=CAN33_29875-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1071bp|location=Sequence derived from alignment at NKJJ01000003.1:110823..111308- (Aspergillus niger FDAARGOS_311)
TCGACCGGGAATCTTGGTTCTCATCAACGACGCCGATTGGGAGCTCGAAG
GCGAGGAGAACTACGAACTTCAACAAAATGATAACATTGTCTTCGTTTCT
ACGCTTCATGGGGGCTAGGGGAGGTCTGGAGATCTTGTTTGCCAATGAGC
GCAAACACCACGTCACGCTACCTTCGCTTCTTGACGACGGCAGCCGGCCA
ACTATCAGCTACCTCCTGGGTCATCTGGTGAAGAACTACATGAAGGATCA
GAGGCAGGAATTGTTCATACTGGAAGGCAATGTATGGCCACGAATTCTGG
AGCCCCTGATCTGGGCAAAGATGGCTCCGGCTCCATTGCTATCACCGTTG
AGTTCACTCGACCGGGAATCTTGGTTCTCATCAACGACGCCGATTGGGAG
CTCGAAGGCGAGGAGAACTACGAACTTCAACAAAATGATAACATTGTCTT
CGTTTCTACGCTTCATGGGGGCTAGGGGAGGTCTGGAGATCTTGTTTGCC
AATGAGCGCAAACACCACGTCACGCTACCTTCGCTTCTTGACGACGGCAG
CCGGCCAACTATCAGCTACCTCCTGGGTCATCTGGTGAAGAACTACATGA
AGGATCAGAGGCAGGAATTGTTCATACTGGAAGGCAATGTATGGCCACGA
ATTCTGGAGCCCCTGATCTGGGCAAAGATGGCTCCGGCTCCATTGCTATC
ACCGTTGAGTTCACTCGACCGGGAATCTTGGTTCTCATCAACGACGCCGA
TTGGGAGCTCGAAGGCGAGGAGAACTACGAACTTCAACAAAATGATAACA
TTGTCTTCGTTTCTACGCTTCATGGGGGCTAGGGGAGGTCTGGAGATCTT
GTTTGCCAATGAGCGCAAACACCACGTCACGCTACCTTCGCTTCTTGACG
ACGGCAGCCGGCCAACTATCAGCTACCTCCTGGGTCATCTGGTGAAGAAC
TACATGAAGGATCAGAGGCAGGAATTGTTCATACTGGAAGGCAATGTATG
GCCACGAATTCTGGAGCCCCTGATCTGGGCAAAGATGGCTCCGGCTCCAT
TGCTATCACCGTTGAGTTCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034227 | tRNA thio-modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265K1R |
| DBxref | InterPro:IPR016155 |
| DBxref | InterPro:IPR015221 |
| DBxref | InterPro:IPR012675 |
| DBxref | PFAM:PF09138 |
| DBxref | PFAM:PF02597 |
| Product | Ubiquitin- modifier 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:110823..111308 - |
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