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CAN33_29890-T1, CAN33_29890-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29890-T1
Unique NameCAN33_29890-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:115856..117376+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29890-T1 ID=CAN33_29890-T1|Name=CAN33_29890-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1521bp|location=Sequence derived from alignment at NKJJ01000003.1:115856..117376+ (Aspergillus niger FDAARGOS_311)
ATGAAGCCGCTCATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAA
GGTGAGAGCGTTTACCCAGCCCGGGATCCTGGAATTTCCTTCCTTTTGTA
AGAGACTGCTTACTGACGGTTGCAGTTAGCTTGCAGTCGACCTAGCCTCG
CGATTTAACGGGGAGATCATCAATGGCGATGCCATGCAAATGTATCGCGG
TCTCCCTATCATCACCAACCAGATCCCCGTCGAGGAGCGAAACGGTATCC
CGCATCACTTGATCAGCTGCGTTGAGCTCGAGGAACAGCCGTGGTTTGTC
GGCAGATTCAGAAGCGAAAGTCTCCGACTCATTGACGACATTCACGCCAG
AGGGAAAACTCCCGTCTTGGTCGGTGGTACCCATTACTATACACAGGCCG
TCTTGTTTAAAGACCAGCTACTTGGCGAGGATGCTACTGCAGACGATGTG
CAGGAGGAAGCCGTAAATCAATTAACGGAAGATAACGACCCGAAATCCTC
GACTAAATGGCCCATCCTCGACGCTCCCACTGAGGTGGTTCTACAAAAAC
TGAGAGAGGTCGATCCCGTCATGGCGGATCGATGGCACCCGAACGAAGCA
CGCAAAATCCGTCGCTCCCTAGAGATATATTTCCAGACCGGCAGGCCCGC
GTCGGAAATTTACGCGGAGCAACAGCGGACAAAGCAGGCGGCCCTGATTC
GGGATGACTCCCTTACAGGTGCCGGTCACTTGCGATTCCCGACGATGATA
TTCTGGGTGCACTCGGAGAAGGAGACGCTGAACAGTCGACTGGACAAGCG
GGTTGATGCAATGCTAGAGCAAGGGTTGATGACAGAAGCCAGGCAGATGT
CGGATTACCTTCAGGAAAAGAAAGCTCAGGGCGTCTCCGTTGACCAGAGC
CGCGGCGTATGGGTGTCTATCGGATACAAGGAGCTAGCACCCTATTTCGA
AGCACTATATGCCGGCTCGGCGGATGAGGCCGAGCTAGAGACCCTCAAGA
AATCCGGCATTGAGTCGATCAAGACTGCAACGCGGCAGTATGCCATGTCT
CAAATCAAATGGATCAGAAACAAGTTATGGCAGGCCCTTGCAGATGCGAG
TTCGACCAATCGTCTCTACCTCCTTGACAGCACTAATGTCGACGCATGGG
AGCAGAATATTACTGAGCCGTCCGAACGTCTTGTCCGTGCTCTGCTGGAG
GATCAACCCACTCCCGATCCGAAGTCACTGTCAGAACTCGCAAGGACGGT
CTTGGGCGCCAAGGAGGCGCAGCCACATAAGGAGTCGGGATCCGTCACCA
AGTGCAGGACTTGTGACATCTGCCACAAGACCATGATGGGCGATGAGCAA
TGGCATATACACATCAACGGCTCGGTCCATAGGAGAGCTCTCAAGAGCGC
CGCCAAACGGGCTGCGCGTGACGAATATCTACGAAAGCGACAAAAGCTGC
TACACGAGGGTGAGGAGAAGGGCTCTGAATCTCCCGCGGAGCCAGATGTA
CAAGCCCCTCCGTCCTCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:115856..117376+

>CAN33_29890-T1 ID=CAN33_29890-T1|Name=CAN33_29890-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2886bp|location=Sequence derived from alignment at NKJJ01000003.1:115856..117376+ (Aspergillus niger FDAARGOS_311)
ATGAAGCCGCTCATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAA
GCTTGCAGTCGACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCG
ATGCCATGCAAATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCC
GTCGAGGAGCGAAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCT
CGAGGAACAGCCGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGAC
TCATTGACGACATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGT
ACCCATTACTATACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGA
GGATGCTACTGCAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGG
AAGATAACGACCCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCC
ACTGAGGTGGTTCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGA
TCGATGGCACCCGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATAT
ATTTCCAGACCGGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGG
ACAAAGCAGGCGGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCA
CTTGCGATTCCCGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGC
TGAACAGTCGACTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTG
ATGACAGAAGCCAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCA
GGGCGTCTCCGTTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACA
AGGAGCTAGCACCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAG
GCCGAGCTAGAGACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGC
AACGCGGCAGTATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTAT
GGCAGGCCCTTGCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGAC
AGCACTAATGTCGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACG
TCTTGTCCGTGCTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCAC
TGTCAGAACTCGCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACAT
AAGGAGTCGGGATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAA
GACCATGATGGGCGATGAGCAATGGCATATACACATCAACGGCTCGGTCC
ATAGGAGAGCTCTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATAT
CTACGAAAGCGACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGA
ATCTCCCGCGGAGCCAGATGTACAAGCCCCTCCGTCCTCTTAAATGAAGC
CGCTCATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAAGCTTGCA
GTCGACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCGATGCCAT
GCAAATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCCGTCGAGG
AGCGAAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCTCGAGGAA
CAGCCGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGACTCATTGA
CGACATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGTACCCATT
ACTATACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGAGGATGCT
ACTGCAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGGAAGATAA
CGACCCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCCACTGAGG
TGGTTCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGATCGATGG
CACCCGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATATATTTCCA
GACCGGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGGACAAAGC
AGGCGGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCACTTGCGA
TTCCCGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGCTGAACAG
TCGACTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTGATGACAG
AAGCCAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCAGGGCGTC
TCCGTTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACAAGGAGCT
AGCACCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAGGCCGAGC
TAGAGACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGCAACGCGG
CAGTATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTATGGCAGGC
CCTTGCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGACAGCACTA
ATGTCGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACGTCTTGTC
CGTGCTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCACTGTCAGA
ACTCGCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACATAAGGAGT
CGGGATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAAGACCATG
ATGGGCGATGAGCAATGGCATATACACATCAACGGCTCGGTCCATAGGAG
AGCTCTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATATCTACGAA
AGCGACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGAATCTCCC
GCGGAGCCAGATGTACAAGCCCCTCCGTCCTCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0052381tRNA dimethylallyltransferase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29890CAN33_29890Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29890-T1.exon1CAN33_29890-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29890-T1.exon2CAN33_29890-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29890-T1.cdsCAN33_29890-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29890-T1CAN33_29890-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262C5Z
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR030666
DBxrefInterPro:IPR018022
DBxrefPFAM:PF01715
ProducttRNA dimethylallyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:115856..117376 +
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