You are here

Home

CAN33_2995-T1, CAN33_2995-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2995-T1
Unique NameCAN33_2995-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1875445..1876341+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2995-T1 ID=CAN33_2995-T1|Name=CAN33_2995-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=897bp|location=Sequence derived from alignment at NKJJ01000004.1:1875445..1876341+ (Aspergillus niger FDAARGOS_311)
ATGTCTGGAAACACCAAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGG
CTCCAGCGCCCGTAAGTTGTTCTCTTCTTCTTCTTCTCATCGTCCTTCTA
CTGCTGTCGTCACCCTTTTTCTGCATGGATGATTTTACCCCTCCTTTGAA
GAGAAAGTGGGAGTACTGGGGGGGCTTTTCAAAGAAAGCACTCCCACAAT
CACGAATCTCTTTTCCTGCCCTTTGATTGACGTCTATCCTCTCAATGGTT
ACTGGATCCTTTGGCTGACTTTGACCTCTTCCCCTGCTCTCTAGCCAAGA
CGGGCCGTGTCGTCTTCAACCTCTTCGAGAAGGACGTCCCCAAGACTGCT
AAGAACTTCCGTGAGCTCTGCAAGCTTCCCCAGGGTCAGGGTTACAAGGG
CTCTACCTTCCACCGTGTCATCCCCCAGTTCATGCTCCAGGGTGGTGACT
TCACCCGCCACAACGTGAGTAATCCTGCTATTGTGACCTCGCCTCCGTGG
GCGGCTGTATGAGAGAGAACAATTTGACTGATATAATCATCCAGGGTACC
GGTGGTCGCTCCATCTACGGTGAGAAGTTCGCCGATGAGAACTTCATCTA
CAAGCACAACAAGCCCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAACA
CGTAAGTTCTAGTTCTGTCGCTCGTAAATCTAGGCCCCAGGCAGCTAACA
GCATCTGCAGCAACGGCTCCCAGTTCTTCATCACCACCGTTGTCACCTCT
TGGCTCGATGGCAAGCACGTCGTCTTCGGTGAGGTTGCCGATGCCGAGTC
CATGCAGGTCGTGAAGGAGATCGAGGCTCTCGGCTCCTCCTCCGGCTCCG
TCCGCTCTGCCGTCAAGCCCACCATCGTCGACTGCGGTGAGTTGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:1875445..1876341+

>CAN33_2995-T1 ID=CAN33_2995-T1|Name=CAN33_2995-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2100bp|location=Sequence derived from alignment at NKJJ01000004.1:1875445..1876341+ (Aspergillus niger FDAARGOS_311)
ATGTCTGGAAACACCAAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGG
CTCCAGCGCCCCCAAGACGGGCCGTGTCGTCTTCAACCTCTTCGAGAAGG
ACGTCCCCAAGACTGCTAAGAACTTCCGTGAGCTCTGCAAGCTTCCCCAG
GGTCAGGGTTACAAGGGCTCTACCTTCCACCGTGTCATCCCCCAGTTCAT
GCTCCAGGGTGGTGACTTCACCCGCCACAACGGTACCGGTGGTCGCTCCA
TCTACGGTGAGAAGTTCGCCGATGAGAACTTCATCTACAAGCACAACAAG
CCCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAACACCAACGGCTCCCA
GTTCTTCATCACCACCGTTGTCACCTCTTGGCTCGATGGCAAGCACGTCG
TCTTCGGTGAGGTTGCCGATGCCGAGTCCATGCAGGTCGTGAAGGAGATC
GAGGCTCTCGGCTCCTCCTCCGGCTCCGTCCGCTCTGCCGTCAAGCCCAC
CATCGTCGACTGCGGTGAGTTGTAAATGTCTGGAAACACCAAGGCCTTCT
TTGATATCCAGTACGCCCCCGTGGGCTCCAGCGCCCCCAAGACGGGCCGT
GTCGTCTTCAACCTCTTCGAGAAGGACGTCCCCAAGACTGCTAAGAACTT
CCGTGAGCTCTGCAAGCTTCCCCAGGGTCAGGGTTACAAGGGCTCTACCT
TCCACCGTGTCATCCCCCAGTTCATGCTCCAGGGTGGTGACTTCACCCGC
CACAACGGTACCGGTGGTCGCTCCATCTACGGTGAGAAGTTCGCCGATGA
GAACTTCATCTACAAGCACAACAAGCCCGGTCTCCTCTCCATGGCCAACG
CTGGTCCCAACACCAACGGCTCCCAGTTCTTCATCACCACCGTTGTCACC
TCTTGGCTCGATGGCAAGCACGTCGTCTTCGGTGAGGTTGCCGATGCCGA
GTCCATGCAGGTCGTGAAGGAGATCGAGGCTCTCGGCTCCTCCTCCGGCT
CCGTCCGCTCTGCCGTCAAGCCCACCATCGTCGACTGCGGTGAGTTGTAA
ATGTCTGGAAACACCAAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGG
CTCCAGCGCCCCCAAGACGGGCCGTGTCGTCTTCAACCTCTTCGAGAAGG
ACGTCCCCAAGACTGCTAAGAACTTCCGTGAGCTCTGCAAGCTTCCCCAG
GGTCAGGGTTACAAGGGCTCTACCTTCCACCGTGTCATCCCCCAGTTCAT
GCTCCAGGGTGGTGACTTCACCCGCCACAACGGTACCGGTGGTCGCTCCA
TCTACGGTGAGAAGTTCGCCGATGAGAACTTCATCTACAAGCACAACAAG
CCCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAACACCAACGGCTCCCA
GTTCTTCATCACCACCGTTGTCACCTCTTGGCTCGATGGCAAGCACGTCG
TCTTCGGTGAGGTTGCCGATGCCGAGTCCATGCAGGTCGTGAAGGAGATC
GAGGCTCTCGGCTCCTCCTCCGGCTCCGTCCGCTCTGCCGTCAAGCCCAC
CATCGTCGACTGCGGTGAGTTGTAAATGTCTGGAAACACCAAGGCCTTCT
TTGATATCCAGTACGCCCCCGTGGGCTCCAGCGCCCCCAAGACGGGCCGT
GTCGTCTTCAACCTCTTCGAGAAGGACGTCCCCAAGACTGCTAAGAACTT
CCGTGAGCTCTGCAAGCTTCCCCAGGGTCAGGGTTACAAGGGCTCTACCT
TCCACCGTGTCATCCCCCAGTTCATGCTCCAGGGTGGTGACTTCACCCGC
CACAACGGTACCGGTGGTCGCTCCATCTACGGTGAGAAGTTCGCCGATGA
GAACTTCATCTACAAGCACAACAAGCCCGGTCTCCTCTCCATGGCCAACG
CTGGTCCCAACACCAACGGCTCCCAGTTCTTCATCACCACCGTTGTCACC
TCTTGGCTCGATGGCAAGCACGTCGTCTTCGGTGAGGTTGCCGATGCCGA
GTCCATGCAGGTCGTGAAGGAGATCGAGGCTCTCGGCTCCTCCTCCGGCT
CCGTCCGCTCTGCCGTCAAGCCCACCATCGTCGACTGCGGTGAGTTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CSR1CAN33_2995Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2995-T1.exon1CAN33_2995-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2995-T1.exon2CAN33_2995-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2995-T1.exon3CAN33_2995-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_2995-T1.exon4CAN33_2995-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2995-T1.cdsCAN33_2995-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2995-T1CAN33_2995-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020892
DBxrefInterPro:IPR029000
DBxrefInterPro:IPR024936
DBxrefInterPro:IPR002130
DBxrefPFAM:PF00160
Productphosphatidylinositol transfer protein csr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1875445..1876341 +
Powered by Drupal