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CAN33_29950-T1, CAN33_29950-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29950-T1
Unique NameCAN33_29950-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:140678..142987+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29950-T1 ID=CAN33_29950-T1|Name=CAN33_29950-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2310bp|location=Sequence derived from alignment at NKJJ01000003.1:140678..142987+ (Aspergillus niger FDAARGOS_311)
ATGCAGTCGCGTTTGTTGCCCTCCGGCCCTGGCAGGCGCTGGATTTCTCT
TCGCGTGCCGAACACGCCTCAACGACGTGCCTTCGCCTCCACCCGCTTCC
TTTTCCAGGATGTCTTCCAGTCCCAGCTGGACGACCCTTCCTCCGCCGCC
CTCTTCTCCTCCCTGCAGTCCTCCCGGGCCGTGCCCCAGACCTTGACGGA
AAAGATCGTTCAGAAGTACGCCGTAGGTCTGCCCGATGGCAAGTTTGTCA
AGTCCGGCGACTATGTGACTATCGCTCCCCACCGGATTATGACCCATGAC
AACTCTTGGCCCGTCGCATTGAAGTTCATGTCGATCGGTGCCTCCAAGAT
GCACGATCCCAATCAGGTCGTGATGACTCTCGACCATGATGTCCAGAACA
AAACAGAGAAGAACCTGCAAAAGTACCGCCAGATCGAGGAGTTTGCCAAG
CAACACGGTGTCGAGTTCTATCCCGCCGGTCGAGGAATTGGTCACCAAAT
CATGGTTGAAGAAGGCTTTGCCTGGCCCGGCACTCTGGTGGTCGCCTCGG
ACAGTCACAGTAACACTTATGGTGCCGTGGCCTCCGTTGGAACTCCCATC
GTGAGAACCGATGCGGCCAGTATCTGGGCGACCGGTAAGACGTGGTGGCA
GATCCCCCCAGTGGCCAAGGTGACTTTTACCGGTATCCTGCCCCCTGGCG
TGACTGGCAAGGACGTCATCGTTGCTCTGTGCGGTCTATTCGACAAGGAC
GATGTCCTGAACCATGCAATTGAGTTCACTGGCTCTGAGGAAACCATGAG
AAGCTTGCCCATGGATAGCCGGTTGACCATTGCCAACATGACGACTGAGT
GGGGTGCTTTGTCAGGACTGTTCCCCATGGATGGTGTTCTGAAAGGCTGG
TTGAAGGGCAAGGCTACCACTGCGGCCATGGGCTTGGCTGATGGGCCGTT
CAAGACCCTGGCTGCTCGCAACTTCACCCACCCTGCCATCGAGCAGCTTT
TTGTGAACCCTCTCACTGCCGATAAGGGTGCCAAATATGCGAAGGAGCTC
TTCCTGGACCTTTCGACTCTTTCTCCCTACGTTTCCGGCCCCAACTCGGT
CAAGATTGCCACCCCCCTCAAGGAGCTGGAAGCCCAGGATATCAAGGTCG
ACAAGGCCTATCTGGTTTCCTGCACCAACTCTCGGGCTTCGGACATTGCT
GCTGCTGCTAAGGTGTTCAAGGATGCCGCGGAGAAGAACGGTGGGAAGGT
CCCGAAGATCGCTGATGGCGTCAAGTTTTACATTGCTGCCGCGTCCATTC
CCGAACAGCTCGCTGCGGAAGGAGCTGGTGACTGGCAGACCCTCCTGGAG
GCTGGAGCAACGGCCCTCCCCGCTGGATGCGGACCTTGCATCGGTCTGGG
AACGGGATTGCTGGAGCCCGGCGAGGTCGGCATCAGTGCGTCGAACCGCA
ACTTCAAGGGTCGCATGGGTAGCACTGAAGCCAAGGCATACTTGGGTAGC
CCCGAAATTGTTGCTGCCAGCGCCCTCAGCGGCAAGCTGAGCGGCCCTGG
CTGGTACCAGCCCCCTGAAGGGTGGACCGAAGTTGTCCGCGGTGAGGGCG
ATGGTATCCGCGAGGAGGACCGCATGCTCAATACCGAGCAAGCTCTTGAG
AAGCTCCTTGGTCAGTTGGATGACCTTGTTGCCGATGGGGAGAAGCGCTT
CGCTCCGGAGGAGAAGGTTGAGGAAGAGGGTGGCCTGACGGAGGTGTATC
CTGGTTTCCCTGAACGCGTCTCTGGCGAGATTGTGTTCTGTGATGCTGAC
AACCTGAACACGGACGCCATCTATCCCGGTTACTGGACCTACCAAGACAA
TGTCCCCGTGGAGAAGATGGCTGAAGTATGCATGTCCAACTACGATAAGG
AGTTCGCCTCCATTGCCAAGGAGGGTGACATCCTGGTTGTCGGATACAAC
TTCGGCTGTGGTAGCTCTCGTGAACAGGCGGCCACTGCTCTCTTGGCGAA
GCAGATTCCCCTGGTTGTTTCGGGTAGCTTTGGCAACATCTTCTCCCGGA
ACAGCATTAACAATGCTCTCATGGGTCTGGAGGTCCCTCGCTTGGTTAGC
CGTCTGCGCGAGGAGTTTGGCGACAAGCAGCTTACCCGTCGGACCGGTTG
GACCCTGACCTGGGATGTCCGGCGCAGTCAGATTGAGATCCAGGAAGGCC
AGAACGGACCCAAGTGGACTCACAAGGTGGGCGAGCTGCCGCCCAACGTG
CAGGAGATCATTGCGAAGGGTGGTCTGGAGAAATGGGTCAAGAACGCCAT
TGAGGCGTAG
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Coding sequence (CDS) from alignment at NKJJ01000003.1:140678..142987+

>CAN33_29950-T1 ID=CAN33_29950-T1|Name=CAN33_29950-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2310bp|location=Sequence derived from alignment at NKJJ01000003.1:140678..142987+ (Aspergillus niger FDAARGOS_311)
ATGCAGTCGCGTTTGTTGCCCTCCGGCCCTGGCAGGCGCTGGATTTCTCT
TCGCGTGCCGAACACGCCTCAACGACGTGCCTTCGCCTCCACCCGCTTCC
TTTTCCAGGATGTCTTCCAGTCCCAGCTGGACGACCCTTCCTCCGCCGCC
CTCTTCTCCTCCCTGCAGTCCTCCCGGGCCGTGCCCCAGACCTTGACGGA
AAAGATCGTTCAGAAGTACGCCGTAGGTCTGCCCGATGGCAAGTTTGTCA
AGTCCGGCGACTATGTGACTATCGCTCCCCACCGGATTATGACCCATGAC
AACTCTTGGCCCGTCGCATTGAAGTTCATGTCGATCGGTGCCTCCAAGAT
GCACGATCCCAATCAGGTCGTGATGACTCTCGACCATGATGTCCAGAACA
AAACAGAGAAGAACCTGCAAAAGTACCGCCAGATCGAGGAGTTTGCCAAG
CAACACGGTGTCGAGTTCTATCCCGCCGGTCGAGGAATTGGTCACCAAAT
CATGGTTGAAGAAGGCTTTGCCTGGCCCGGCACTCTGGTGGTCGCCTCGG
ACAGTCACAGTAACACTTATGGTGCCGTGGCCTCCGTTGGAACTCCCATC
GTGAGAACCGATGCGGCCAGTATCTGGGCGACCGGTAAGACGTGGTGGCA
GATCCCCCCAGTGGCCAAGGTGACTTTTACCGGTATCCTGCCCCCTGGCG
TGACTGGCAAGGACGTCATCGTTGCTCTGTGCGGTCTATTCGACAAGGAC
GATGTCCTGAACCATGCAATTGAGTTCACTGGCTCTGAGGAAACCATGAG
AAGCTTGCCCATGGATAGCCGGTTGACCATTGCCAACATGACGACTGAGT
GGGGTGCTTTGTCAGGACTGTTCCCCATGGATGGTGTTCTGAAAGGCTGG
TTGAAGGGCAAGGCTACCACTGCGGCCATGGGCTTGGCTGATGGGCCGTT
CAAGACCCTGGCTGCTCGCAACTTCACCCACCCTGCCATCGAGCAGCTTT
TTGTGAACCCTCTCACTGCCGATAAGGGTGCCAAATATGCGAAGGAGCTC
TTCCTGGACCTTTCGACTCTTTCTCCCTACGTTTCCGGCCCCAACTCGGT
CAAGATTGCCACCCCCCTCAAGGAGCTGGAAGCCCAGGATATCAAGGTCG
ACAAGGCCTATCTGGTTTCCTGCACCAACTCTCGGGCTTCGGACATTGCT
GCTGCTGCTAAGGTGTTCAAGGATGCCGCGGAGAAGAACGGTGGGAAGGT
CCCGAAGATCGCTGATGGCGTCAAGTTTTACATTGCTGCCGCGTCCATTC
CCGAACAGCTCGCTGCGGAAGGAGCTGGTGACTGGCAGACCCTCCTGGAG
GCTGGAGCAACGGCCCTCCCCGCTGGATGCGGACCTTGCATCGGTCTGGG
AACGGGATTGCTGGAGCCCGGCGAGGTCGGCATCAGTGCGTCGAACCGCA
ACTTCAAGGGTCGCATGGGTAGCACTGAAGCCAAGGCATACTTGGGTAGC
CCCGAAATTGTTGCTGCCAGCGCCCTCAGCGGCAAGCTGAGCGGCCCTGG
CTGGTACCAGCCCCCTGAAGGGTGGACCGAAGTTGTCCGCGGTGAGGGCG
ATGGTATCCGCGAGGAGGACCGCATGCTCAATACCGAGCAAGCTCTTGAG
AAGCTCCTTGGTCAGTTGGATGACCTTGTTGCCGATGGGGAGAAGCGCTT
CGCTCCGGAGGAGAAGGTTGAGGAAGAGGGTGGCCTGACGGAGGTGTATC
CTGGTTTCCCTGAACGCGTCTCTGGCGAGATTGTGTTCTGTGATGCTGAC
AACCTGAACACGGACGCCATCTATCCCGGTTACTGGACCTACCAAGACAA
TGTCCCCGTGGAGAAGATGGCTGAAGTATGCATGTCCAACTACGATAAGG
AGTTCGCCTCCATTGCCAAGGAGGGTGACATCCTGGTTGTCGGATACAAC
TTCGGCTGTGGTAGCTCTCGTGAACAGGCGGCCACTGCTCTCTTGGCGAA
GCAGATTCCCCTGGTTGTTTCGGGTAGCTTTGGCAACATCTTCTCCCGGA
ACAGCATTAACAATGCTCTCATGGGTCTGGAGGTCCCTCGCTTGGTTAGC
CGTCTGCGCGAGGAGTTTGGCGACAAGCAGCTTACCCGTCGGACCGGTTG
GACCCTGACCTGGGATGTCCGGCGCAGTCAGATTGAGATCCAGGAAGGCC
AGAACGGACCCAAGTGGACTCACAAGGTGGGCGAGCTGCCGCCCAACGTG
CAGGAGATCATTGCGAAGGGTGGTCTGGAGAAATGGGTCAAGAACGCCAT
TGAGGCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009085lysine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0004409homoaconitate hydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29950CAN33_29950Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29950-T1.exon1CAN33_29950-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29950-T1.cdsCAN33_29950-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29950-T1CAN33_29950-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036008
DBxrefInterPro:IPR039386
DBxrefInterPro:IPR018136
DBxrefInterPro:IPR015928
DBxrefInterPro:IPR000573
DBxrefInterPro:IPR004418
DBxrefInterPro:IPR015931
DBxrefInterPro:IPR001030
DBxrefPFAM:PF00694
DBxrefPFAM:PF00330
Producthomoaconitase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:140678..142987 +
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