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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:148670..150693- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_29960-T1 ID=CAN33_29960-T1|Name=CAN33_29960-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2024bp|location=Sequence derived from alignment at NKJJ01000003.1:148670..150693- (Aspergillus niger FDAARGOS_311)
ATGCGATCATCGGCCGTCCGGACCCTGCGGTGGGCGACACCCTTTCGCCC
ATCATGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGCGCTGGTCCAGCTC
TCCATGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCGTCGATACTTCTCA
GTATCCTCACCAGCTCAATCCATATTCGATGCCGATTCCACCATATATGC
GCTTTCGACAGCATCTGGACGGGCTGCCATTGCCGTTGTGCGGGCATCGG
GACCTGCATGTGTGCAAGTATGAGAGCTCACTTCTGCCATTGAATTTCCT
CCCGACTCAGCTCAGCAGCGCCGGCAGCTAATAACGTCACTCACTCACGC
AGATCTACAAATCTCTCTGTCCAGAAGCACCTCTTCCCCGGCCCCGCCTC
GCAGTCGTCCGCACCCTGTACGATCCCTCCCAGAAACCCTCCCCCAACAC
CGTCCTCGACGCCGGCGCCTTAGTCCTATACTTCCCCGGCCCGAAGACCG
TGACTGGCGAAGATGTTCTCGAGCTGCACCTCCACGGTGGCCCAGCCATC
GTCAAATCCGTTCTGTCGTCCATCTCGCGTACAAACAACCCTGACTACAC
AGTCCGCTACGCCGAACCCGGCGAGTTCACCCGTCGAGCCTTCATGAACA
ACCGCCTAGACCTCCCGCAGATCGAAGCCCTGGGCGATACCTTGTCCGCT
GACACGGAGCAACAGCGCCGGCTTGCTGTCCGGGGTGCCAGCGATGCGCT
ATCGAAGCGGTACGAACAATGGCGACATCAATTGCTCTATGCGCGCGGCG
AACTAGAGGCGTTGATTGACTTCTCAGAGGATCAGCATTTCGACGAGTCC
ACCGAGGACCTGGTGTCCTCGGTTGCGGCTCAGGTGCGGGCTCTGCGGGC
TCAAATCGCCCTTCACATCCAGAATGCGTCCAAGGGCGAGCTCCTACGTA
ACGGAATCAAGGTCGCTCTCCTGGGGGCCCCGAATGCGGGGAAGAGCTCG
CTTTTGAATCGAATCGTTGGCAGAGAGGCCGCCATCGTTAGCACTGAGGA
AGGCACCACGCGGGACATCGTGGATGTCGGTGTCGACATCGGCGGCTGGT
ACTGCAAGCTCGGCGACATGGCAGGGATACGCTCCGAGCCAAATGATCCT
ACCGGACAGAAGAAGACGGTTGTGATTGGCGCCGTGGAACAAGAGGGCAT
CAGACGGGCAAAGGCACGTGCCTTGGAATCGGACGTGGTCATCGTGGTCG
TCTCAGTAGAAGAAGCCACCGATGGTACAGCGACGTACCGCCTCGCCGTC
GAGCAGGAGGTCGTCGACGCAGCCAACGACTGCGCTCGCGCCGGCAAGTG
CGTCGTCGTAACCATCAACAAATGTGACCGATTACCGGAGGGTAAATTGC
CCGCGCAGCTCATCGAGACAGTCAGCCAACTCTTCAAGGCGGCCCCGGAC
CAGCGCCAGCGTATCTTCGGCATCTCCTGTCTAGATGCCACCAACGGCCT
GAACCTCACCAGCCCCGGTTCCAGCCAGCTCTCCGATCCCGGCTACATTC
AGCAATTTCTACAAGGTCTGATGACTACATTCGAGGATATCGCCTCTCCA
ACAGGCATCGATGGGGACGAGAACGGAAAATACGATCATGCATATTGGGA
AGATTCACTCGGCGTGACGCATCGCCAAAGCTCTAATTTACAACGCTGTC
TCGAACACCTAGATGATTTCCTGACGCAAACTCAACCGCAATCCCAGACG
CCTATGCCTTCCTCATCTCGCCAATTCGCTCATGAATTCCCAGAAACGGA
CATGGACATGGACATTGACATCGTCACCGCCGCTGAACACCTGCGCTCTG
CCGCTGATACCATGGCGAAGATTACGGGCCGTGGGGAAAGCGGAGACGTG
GAAGATGTTCTGGGCGTTGTGTTTGAAAAGTAAGTTGCTATGTATTATAG
TGTGGTAGAGTGCTGTTTTTCTTTTGTTGTTCTTGTTGCTGACTGAGTCG
AATAGGTTCTGTGTGGGCAAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:148670..150693- >CAN33_29960-T1 ID=CAN33_29960-T1|Name=CAN33_29960-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5589bp|location=Sequence derived from alignment at NKJJ01000003.1:148670..150693- (Aspergillus niger FDAARGOS_311)
GTTCTGTGTGGGCAAGTGAATCTACAAATCTCTCTGTCCAGAAGCACCTC
TTCCCCGGCCCCGCCTCGCAGTCGTCCGCACCCTGTACGATCCCTCCCAG
AAACCCTCCCCCAACACCGTCCTCGACGCCGGCGCCTTAGTCCTATACTT
CCCCGGCCCGAAGACCGTGACTGGCGAAGATGTTCTCGAGCTGCACCTCC
ACGGTGGCCCAGCCATCGTCAAATCCGTTCTGTCGTCCATCTCGCGTACA
AACAACCCTGACTACACAGTCCGCTACGCCGAACCCGGCGAGTTCACCCG
TCGAGCCTTCATGAACAACCGCCTAGACCTCCCGCAGATCGAAGCCCTGG
GCGATACCTTGTCCGCTGACACGGAGCAACAGCGCCGGCTTGCTGTCCGG
GGTGCCAGCGATGCGCTATCGAAGCGGTACGAACAATGGCGACATCAATT
GCTCTATGCGCGCGGCGAACTAGAGGCGTTGATTGACTTCTCAGAGGATC
AGCATTTCGACGAGTCCACCGAGGACCTGGTGTCCTCGGTTGCGGCTCAG
GTGCGGGCTCTGCGGGCTCAAATCGCCCTTCACATCCAGAATGCGTCCAA
GGGCGAGCTCCTACGTAACGGAATCAAGGTCGCTCTCCTGGGGGCCCCGA
ATGCGGGGAAGAGCTCGCTTTTGAATCGAATCGTTGGCAGAGAGGCCGCC
ATCGTTAGCACTGAGGAAGGCACCACGCGGGACATCGTGGATGTCGGTGT
CGACATCGGCGGCTGGTACTGCAAGCTCGGCGACATGGCAGGGATACGCT
CCGAGCCAAATGATCCTACCGGACAGAAGAAGACGGTTGTGATTGGCGCC
GTGGAACAAGAGGGCATCAGACGGGCAAAGGCACGTGCCTTGGAATCGGA
CGTGGTCATCGTGGTCGTCTCAGTAGAAGAAGCCACCGATGGTACAGCGA
CGTACCGCCTCGCCGTCGAGCAGGAGGTCGTCGACGCAGCCAACGACTGC
GCTCGCGCCGGCAAGTGCGTCGTCGTAACCATCAACAAATGTGACCGATT
ACCGGAGGGTAAATTGCCCGCGCAGCTCATCGAGACAGTCAGCCAACTCT
TCAAGGCGGCCCCGGACCAGCGCCAGCGTATCTTCGGCATCTCCTGTCTA
GATGCCACCAACGGCCTGAACCTCACCAGCCCCGGTTCCAGCCAGCTCTC
CGATCCCGGCTACATTCAGCAATTTCTACAAGGTCTGATGACTACATTCG
AGGATATCGCCTCTCCAACAGGCATCGATGGGGACGAGAACGGAAAATAC
GATCATGCATATTGGGAAGATTCACTCGGCGTGACGCATCGCCAAAGCTC
TAATTTACAACGCTGTCTCGAACACCTAGATGATTTCCTGACGCAAACTC
AACCGCAATCCCAGACGCCTATGCCTTCCTCATCTCGCCAATTCGCTCAT
GAATTCCCAGAAACGGACATGGACATGGACATTGACATCGTCACCGCCGC
TGAACACCTGCGCTCTGCCGCTGATACCATGGCGAAGATTACGGGCCGTG
GGGAAAGCGGAGACGTGGAAGATGTTCTGGGCGTTGTGTTTGAAAAATGC
GATCATCGGCCGTCCGGACCCTGCGGTGGGCGACACCCTTTCGCCCATCA
TGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGCGCTGGTCCAGCTCTCCA
TGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCGTCGATACTTCTCAGTAT
CCTCACCAGCTCAATCCATATTCGATGCCGATTCCACCATATATGCGCTT
TCGACAGCATCTGGACGGGCTGCCATTGCCGTTGTGCGGGCATCGGGACC
TGCATGTGTGCAAGTTCTGTGTGGGCAAGTGAATCTACAAATCTCTCTGT
CCAGAAGCACCTCTTCCCCGGCCCCGCCTCGCAGTCGTCCGCACCCTGTA
CGATCCCTCCCAGAAACCCTCCCCCAACACCGTCCTCGACGCCGGCGCCT
TAGTCCTATACTTCCCCGGCCCGAAGACCGTGACTGGCGAAGATGTTCTC
GAGCTGCACCTCCACGGTGGCCCAGCCATCGTCAAATCCGTTCTGTCGTC
CATCTCGCGTACAAACAACCCTGACTACACAGTCCGCTACGCCGAACCCG
GCGAGTTCACCCGTCGAGCCTTCATGAACAACCGCCTAGACCTCCCGCAG
ATCGAAGCCCTGGGCGATACCTTGTCCGCTGACACGGAGCAACAGCGCCG
GCTTGCTGTCCGGGGTGCCAGCGATGCGCTATCGAAGCGGTACGAACAAT
GGCGACATCAATTGCTCTATGCGCGCGGCGAACTAGAGGCGTTGATTGAC
TTCTCAGAGGATCAGCATTTCGACGAGTCCACCGAGGACCTGGTGTCCTC
GGTTGCGGCTCAGGTGCGGGCTCTGCGGGCTCAAATCGCCCTTCACATCC
AGAATGCGTCCAAGGGCGAGCTCCTACGTAACGGAATCAAGGTCGCTCTC
CTGGGGGCCCCGAATGCGGGGAAGAGCTCGCTTTTGAATCGAATCGTTGG
CAGAGAGGCCGCCATCGTTAGCACTGAGGAAGGCACCACGCGGGACATCG
TGGATGTCGGTGTCGACATCGGCGGCTGGTACTGCAAGCTCGGCGACATG
GCAGGGATACGCTCCGAGCCAAATGATCCTACCGGACAGAAGAAGACGGT
TGTGATTGGCGCCGTGGAACAAGAGGGCATCAGACGGGCAAAGGCACGTG
CCTTGGAATCGGACGTGGTCATCGTGGTCGTCTCAGTAGAAGAAGCCACC
GATGGTACAGCGACGTACCGCCTCGCCGTCGAGCAGGAGGTCGTCGACGC
AGCCAACGACTGCGCTCGCGCCGGCAAGTGCGTCGTCGTAACCATCAACA
AATGTGACCGATTACCGGAGGGTAAATTGCCCGCGCAGCTCATCGAGACA
GTCAGCCAACTCTTCAAGGCGGCCCCGGACCAGCGCCAGCGTATCTTCGG
CATCTCCTGTCTAGATGCCACCAACGGCCTGAACCTCACCAGCCCCGGTT
CCAGCCAGCTCTCCGATCCCGGCTACATTCAGCAATTTCTACAAGGTCTG
ATGACTACATTCGAGGATATCGCCTCTCCAACAGGCATCGATGGGGACGA
GAACGGAAAATACGATCATGCATATTGGGAAGATTCACTCGGCGTGACGC
ATCGCCAAAGCTCTAATTTACAACGCTGTCTCGAACACCTAGATGATTTC
CTGACGCAAACTCAACCGCAATCCCAGACGCCTATGCCTTCCTCATCTCG
CCAATTCGCTCATGAATTCCCAGAAACGGACATGGACATGGACATTGACA
TCGTCACCGCCGCTGAACACCTGCGCTCTGCCGCTGATACCATGGCGAAG
ATTACGGGCCGTGGGGAAAGCGGAGACGTGGAAGATGTTCTGGGCGTTGT
GTTTGAAAAATGCGATCATCGGCCGTCCGGACCCTGCGGTGGGCGACACC
CTTTCGCCCATCATGGAGTAGGTGCTTCACCGTGGCCCGGCAGGGCGCTG
GTCCAGCTCTCCATGCCCGGAGCTCGTCTCCGCGTGTGCCTCCGCGTCGA
TACTTCTCAGTATCCTCACCAGCTCAATCCATATTCGATGCCGATTCCAC
CATATATGCGCTTTCGACAGCATCTGGACGGGCTGCCATTGCCGTTGTGC
GGGCATCGGGACCTGCATGTGTGCAAGTTCTGTGTGGGCAAGTGAATCTA
CAAATCTCTCTGTCCAGAAGCACCTCTTCCCCGGCCCCGCCTCGCAGTCG
TCCGCACCCTGTACGATCCCTCCCAGAAACCCTCCCCCAACACCGTCCTC
GACGCCGGCGCCTTAGTCCTATACTTCCCCGGCCCGAAGACCGTGACTGG
CGAAGATGTTCTCGAGCTGCACCTCCACGGTGGCCCAGCCATCGTCAAAT
CCGTTCTGTCGTCCATCTCGCGTACAAACAACCCTGACTACACAGTCCGC
TACGCCGAACCCGGCGAGTTCACCCGTCGAGCCTTCATGAACAACCGCCT
AGACCTCCCGCAGATCGAAGCCCTGGGCGATACCTTGTCCGCTGACACGG
AGCAACAGCGCCGGCTTGCTGTCCGGGGTGCCAGCGATGCGCTATCGAAG
CGGTACGAACAATGGCGACATCAATTGCTCTATGCGCGCGGCGAACTAGA
GGCGTTGATTGACTTCTCAGAGGATCAGCATTTCGACGAGTCCACCGAGG
ACCTGGTGTCCTCGGTTGCGGCTCAGGTGCGGGCTCTGCGGGCTCAAATC
GCCCTTCACATCCAGAATGCGTCCAAGGGCGAGCTCCTACGTAACGGAAT
CAAGGTCGCTCTCCTGGGGGCCCCGAATGCGGGGAAGAGCTCGCTTTTGA
ATCGAATCGTTGGCAGAGAGGCCGCCATCGTTAGCACTGAGGAAGGCACC
ACGCGGGACATCGTGGATGTCGGTGTCGACATCGGCGGCTGGTACTGCAA
GCTCGGCGACATGGCAGGGATACGCTCCGAGCCAAATGATCCTACCGGAC
AGAAGAAGACGGTTGTGATTGGCGCCGTGGAACAAGAGGGCATCAGACGG
GCAAAGGCACGTGCCTTGGAATCGGACGTGGTCATCGTGGTCGTCTCAGT
AGAAGAAGCCACCGATGGTACAGCGACGTACCGCCTCGCCGTCGAGCAGG
AGGTCGTCGACGCAGCCAACGACTGCGCTCGCGCCGGCAAGTGCGTCGTC
GTAACCATCAACAAATGTGACCGATTACCGGAGGGTAAATTGCCCGCGCA
GCTCATCGAGACAGTCAGCCAACTCTTCAAGGCGGCCCCGGACCAGCGCC
AGCGTATCTTCGGCATCTCCTGTCTAGATGCCACCAACGGCCTGAACCTC
ACCAGCCCCGGTTCCAGCCAGCTCTCCGATCCCGGCTACATTCAGCAATT
TCTACAAGGTCTGATGACTACATTCGAGGATATCGCCTCTCCAACAGGCA
TCGATGGGGACGAGAACGGAAAATACGATCATGCATATTGGGAAGATTCA
CTCGGCGTGACGCATCGCCAAAGCTCTAATTTACAACGCTGTCTCGAACA
CCTAGATGATTTCCTGACGCAAACTCAACCGCAATCCCAGACGCCTATGC
CTTCCTCATCTCGCCAATTCGCTCATGAATTCCCAGAAACGGACATGGAC
ATGGACATTGACATCGTCACCGCCGCTGAACACCTGCGCTCTGCCGCTGA
TACCATGGCGAAGATTACGGGCCGTGGGGAAAGCGGAGACGTGGAAGATG
TTCTGGGCGTTGTGTTTGAAAAATGCGATCATCGGCCGTCCGGACCCTGC
GGTGGGCGACACCCTTTCGCCCATCATGGAGTAGGTGCTTCACCGTGGCC
CGGCAGGGCGCTGGTCCAGCTCTCCATGCCCGGAGCTCGTCTCCGCGTGT
GCCTCCGCGTCGATACTTCTCAGTATCCTCACCAGCTCAATCCATATTCG
ATGCCGATTCCACCATATATGCGCTTTCGACAGCATCTGGACGGGCTGCC
ATTGCCGTTGTGCGGGCATCGGGACCTGCATGTGTGCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006400 | tRNA modification |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005515 | protein binding |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR031168 |
| DBxref | InterPro:IPR004520 |
| DBxref | InterPro:IPR005225 |
| DBxref | InterPro:IPR027266 |
| DBxref | InterPro:IPR025867 |
| DBxref | InterPro:IPR018948 |
| DBxref | InterPro:IPR006073 |
| DBxref | PFAM:PF10396 |
| DBxref | PFAM:PF12631 |
| DBxref | PFAM:PF01926 |
| Product | GTP-binding protein TrmE N-terminus family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:148670..150693 - |
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