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CAN33_29975-T1, CAN33_29975-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29975-T1
Unique NameCAN33_29975-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:159423..160837-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29975-T1 ID=CAN33_29975-T1|Name=CAN33_29975-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1415bp|location=Sequence derived from alignment at NKJJ01000003.1:159423..160837- (Aspergillus niger FDAARGOS_311)
ATGGTATTTATGCGCTCTTTCTCCCGCCAACTCCGGCGACCTGCCACTTC
TCTCCTCTCCACCAAGGGAGCCTTCGCGCCTGCGGCCAGCAGCCCATTCC
GGGCTGCTCCTTTGGCTAACTCGATCGCTGGTGCACGTACGCTAACCGCC
TCCGCGAATCTACAGGGCAAGATTCTTATGGTCCTCTATGACGTAAGTAC
CCGAATAGCATCACTTTCTTTTCTCGTAAATCACCAGAAACTAACCATCT
CCAAATAGGGCGGTGAGCACGCCAAGCAGCAGCCCGGTCTACTGGGTACC
ACTGAGAACGAGCTCGGCTTGAGGAAGTGGCTCGAGGAGCAGGGTCACAC
CCTGGTCACCACTTCCGACAAGGAGGGCGAGAACTCGACTTTCGACAAGG
AGCTCGTCGACGCTGAAGTCATCATCACCACTCCGTATGTGACCCACTCC
ACTACCCACAGTTATCCGCTCTGGGAACTTGGCAACTACGGGACCTAATT
AGCTGACTGCTTGCCCGCAACAGCTTCCACCCCGGTTACCTCACTGCTGA
GCGTCTGGCTAAGGCCAAGAACCTCAAGATCGCCGTCACTGCTGGTGTCG
GTTCCGACCACGTCGACCTGAACGCTGCCAACAAGACCAATGGCGGTATC
ACCGTTGCCGAGGTCACCGGCTGCAATGTCGTCTCCGTCGCTGAGCACGT
TGTCATGACCATCCTGACCCTGGTCCGCAACTTCGTTCCCGCCCACGAGC
AGATCCGCCGCGGCGAGTGGGACGTTGCTGCTGTCGCTAAGAACGAGTTC
GACCTCGAGGGCAAGGTCGTCGGTACCGTTGCCGTTGGCCGTATCGGTGA
GCGTGTCCTCCGCCGTCTCAAGCCCTTCGACTGCAAGGAGCTCCTCTACT
ACGACTACCAGCCCCTTGCCCCTGAGGTTGAGAAGGAGATCGGCTGCCGC
CGTGTCGACAACCTCGAGGAGATGCTCGCCCAGTGTGATGTTGTCACCAT
CAACTGCCCTCTGCACGAGAAGACCCGCGGTCTGTTCAACAAGGAGCTCA
TCTCCAAGATGAAGAAGGGCTCTTGGCTCGTCAACACCGCTCGTGGTGCC
ATCGTCGTCAAGGAGGATGTCGCCGAGGCCGTCAAGTCTGGCCACCTCCG
CGGCTACGGTGGTGATGTCTGGTTCCCTCAGCCCGCCCCCGCCGACCACC
CTCTGCGTACTGTCCAGGGCCCCTGGGGCGGCGGCAACGCCATGGTTCCT
CACATGTCCGGTACCTCCATCGATGCCCAGATCCGCTACGCCAACGGTAC
CAAGGCCATCCTCGAGAGCTACTTCTCCGGCCGCCACGACTACCGCCCCG
AGGACCTCATCGTCCACGGCGGTGACTACGTTACCAAGGCCTACGGTCAG
CGCAACAAGGCCTAA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:159423..160837-

>CAN33_29975-T1 ID=CAN33_29975-T1|Name=CAN33_29975-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3780bp|location=Sequence derived from alignment at NKJJ01000003.1:159423..160837- (Aspergillus niger FDAARGOS_311)
CTTCCACCCCGGTTACCTCACTGCTGAGCGTCTGGCTAAGGCCAAGAACC
TCAAGATCGCCGTCACTGCTGGTGTCGGTTCCGACCACGTCGACCTGAAC
GCTGCCAACAAGACCAATGGCGGTATCACCGTTGCCGAGGTCACCGGCTG
CAATGTCGTCTCCGTCGCTGAGCACGTTGTCATGACCATCCTGACCCTGG
TCCGCAACTTCGTTCCCGCCCACGAGCAGATCCGCCGCGGCGAGTGGGAC
GTTGCTGCTGTCGCTAAGAACGAGTTCGACCTCGAGGGCAAGGTCGTCGG
TACCGTTGCCGTTGGCCGTATCGGTGAGCGTGTCCTCCGCCGTCTCAAGC
CCTTCGACTGCAAGGAGCTCCTCTACTACGACTACCAGCCCCTTGCCCCT
GAGGTTGAGAAGGAGATCGGCTGCCGCCGTGTCGACAACCTCGAGGAGAT
GCTCGCCCAGTGTGATGTTGTCACCATCAACTGCCCTCTGCACGAGAAGA
CCCGCGGTCTGTTCAACAAGGAGCTCATCTCCAAGATGAAGAAGGGCTCT
TGGCTCGTCAACACCGCTCGTGGTGCCATCGTCGTCAAGGAGGATGTCGC
CGAGGCCGTCAAGTCTGGCCACCTCCGCGGCTACGGTGGTGATGTCTGGT
TCCCTCAGCCCGCCCCCGCCGACCACCCTCTGCGTACTGTCCAGGGCCCC
TGGGGCGGCGGCAACGCCATGGTTCCTCACATGTCCGGTACCTCCATCGA
TGCCCAGATCCGCTACGCCAACGGTACCAAGGCCATCCTCGAGAGCTACT
TCTCCGGCCGCCACGACTACCGCCCCGAGGACCTCATCGTCCACGGCGGT
GACTACGTTACCAAGGCCTACGGTCAGCGCAACAAGGCCTAAGGCGGTGA
GCACGCCAAGCAGCAGCCCGGTCTACTGGGTACCACTGAGAACGAGCTCG
GCTTGAGGAAGTGGCTCGAGGAGCAGGGTCACACCCTGGTCACCACTTCC
GACAAGGAGGGCGAGAACTCGACTTTCGACAAGGAGCTCGTCGACGCTGA
AGTCATCATCACCACTCCATGGTATTTATGCGCTCTTTCTCCCGCCAACT
CCGGCGACCTGCCACTTCTCTCCTCTCCACCAAGGGAGCCTTCGCGCCTG
CGGCCAGCAGCCCATTCCGGGCTGCTCCTTTGGCTAACTCGATCGCTGGT
GCACGTACGCTAACCGCCTCCGCGAATCTACAGGGCAAGATTCTTATGGT
CCTCTATGACCTTCCACCCCGGTTACCTCACTGCTGAGCGTCTGGCTAAG
GCCAAGAACCTCAAGATCGCCGTCACTGCTGGTGTCGGTTCCGACCACGT
CGACCTGAACGCTGCCAACAAGACCAATGGCGGTATCACCGTTGCCGAGG
TCACCGGCTGCAATGTCGTCTCCGTCGCTGAGCACGTTGTCATGACCATC
CTGACCCTGGTCCGCAACTTCGTTCCCGCCCACGAGCAGATCCGCCGCGG
CGAGTGGGACGTTGCTGCTGTCGCTAAGAACGAGTTCGACCTCGAGGGCA
AGGTCGTCGGTACCGTTGCCGTTGGCCGTATCGGTGAGCGTGTCCTCCGC
CGTCTCAAGCCCTTCGACTGCAAGGAGCTCCTCTACTACGACTACCAGCC
CCTTGCCCCTGAGGTTGAGAAGGAGATCGGCTGCCGCCGTGTCGACAACC
TCGAGGAGATGCTCGCCCAGTGTGATGTTGTCACCATCAACTGCCCTCTG
CACGAGAAGACCCGCGGTCTGTTCAACAAGGAGCTCATCTCCAAGATGAA
GAAGGGCTCTTGGCTCGTCAACACCGCTCGTGGTGCCATCGTCGTCAAGG
AGGATGTCGCCGAGGCCGTCAAGTCTGGCCACCTCCGCGGCTACGGTGGT
GATGTCTGGTTCCCTCAGCCCGCCCCCGCCGACCACCCTCTGCGTACTGT
CCAGGGCCCCTGGGGCGGCGGCAACGCCATGGTTCCTCACATGTCCGGTA
CCTCCATCGATGCCCAGATCCGCTACGCCAACGGTACCAAGGCCATCCTC
GAGAGCTACTTCTCCGGCCGCCACGACTACCGCCCCGAGGACCTCATCGT
CCACGGCGGTGACTACGTTACCAAGGCCTACGGTCAGCGCAACAAGGCCT
AAGGCGGTGAGCACGCCAAGCAGCAGCCCGGTCTACTGGGTACCACTGAG
AACGAGCTCGGCTTGAGGAAGTGGCTCGAGGAGCAGGGTCACACCCTGGT
CACCACTTCCGACAAGGAGGGCGAGAACTCGACTTTCGACAAGGAGCTCG
TCGACGCTGAAGTCATCATCACCACTCCATGGTATTTATGCGCTCTTTCT
CCCGCCAACTCCGGCGACCTGCCACTTCTCTCCTCTCCACCAAGGGAGCC
TTCGCGCCTGCGGCCAGCAGCCCATTCCGGGCTGCTCCTTTGGCTAACTC
GATCGCTGGTGCACGTACGCTAACCGCCTCCGCGAATCTACAGGGCAAGA
TTCTTATGGTCCTCTATGACCTTCCACCCCGGTTACCTCACTGCTGAGCG
TCTGGCTAAGGCCAAGAACCTCAAGATCGCCGTCACTGCTGGTGTCGGTT
CCGACCACGTCGACCTGAACGCTGCCAACAAGACCAATGGCGGTATCACC
GTTGCCGAGGTCACCGGCTGCAATGTCGTCTCCGTCGCTGAGCACGTTGT
CATGACCATCCTGACCCTGGTCCGCAACTTCGTTCCCGCCCACGAGCAGA
TCCGCCGCGGCGAGTGGGACGTTGCTGCTGTCGCTAAGAACGAGTTCGAC
CTCGAGGGCAAGGTCGTCGGTACCGTTGCCGTTGGCCGTATCGGTGAGCG
TGTCCTCCGCCGTCTCAAGCCCTTCGACTGCAAGGAGCTCCTCTACTACG
ACTACCAGCCCCTTGCCCCTGAGGTTGAGAAGGAGATCGGCTGCCGCCGT
GTCGACAACCTCGAGGAGATGCTCGCCCAGTGTGATGTTGTCACCATCAA
CTGCCCTCTGCACGAGAAGACCCGCGGTCTGTTCAACAAGGAGCTCATCT
CCAAGATGAAGAAGGGCTCTTGGCTCGTCAACACCGCTCGTGGTGCCATC
GTCGTCAAGGAGGATGTCGCCGAGGCCGTCAAGTCTGGCCACCTCCGCGG
CTACGGTGGTGATGTCTGGTTCCCTCAGCCCGCCCCCGCCGACCACCCTC
TGCGTACTGTCCAGGGCCCCTGGGGCGGCGGCAACGCCATGGTTCCTCAC
ATGTCCGGTACCTCCATCGATGCCCAGATCCGCTACGCCAACGGTACCAA
GGCCATCCTCGAGAGCTACTTCTCCGGCCGCCACGACTACCGCCCCGAGG
ACCTCATCGTCCACGGCGGTGACTACGTTACCAAGGCCTACGGTCAGCGC
AACAAGGCCTAAGGCGGTGAGCACGCCAAGCAGCAGCCCGGTCTACTGGG
TACCACTGAGAACGAGCTCGGCTTGAGGAAGTGGCTCGAGGAGCAGGGTC
ACACCCTGGTCACCACTTCCGACAAGGAGGGCGAGAACTCGACTTTCGAC
AAGGAGCTCGTCGACGCTGAAGTCATCATCACCACTCCATGGTATTTATG
CGCTCTTTCTCCCGCCAACTCCGGCGACCTGCCACTTCTCTCCTCTCCAC
CAAGGGAGCCTTCGCGCCTGCGGCCAGCAGCCCATTCCGGGCTGCTCCTT
TGGCTAACTCGATCGCTGGTGCACGTACGCTAACCGCCTCCGCGAATCTA
CAGGGCAAGATTCTTATGGTCCTCTATGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008863formate dehydrogenase (NAD+) activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29975CAN33_29975Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29975-T1CAN33_29975-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29975-T1.cdsCAN33_29975-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29975-T1.exon3CAN33_29975-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_29975-T1.exon2CAN33_29975-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29975-T1.exon1CAN33_29975-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR033689
DBxrefInterPro:IPR029752
DBxrefInterPro:IPR029753
DBxrefInterPro:IPR006139
DBxrefInterPro:IPR006140
DBxrefPFAM:PF02826
DBxrefPFAM:PF00389
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:159423..160837 -
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