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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1877970..1878700- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_3000-T1 ID=CAN33_3000-T1|Name=CAN33_3000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=731bp|location=Sequence derived from alignment at NKJJ01000004.1:1877970..1878700- (Aspergillus niger FDAARGOS_311)
ATGGATATGACTTCATCAACCATTGACATCAGCATGGACTCACCCAGCTG
CAAGATCTCGGTACAACCTCCATCACCTCATACCAAACCCGAGGCTATCT
ACTAACCATGTCCAGATGCTCTGGAACTGGAACACCGTGGATGCATGTAA
GTCCAGTCCAACACCACCAAACATCAAACCACCTACCTAAGCACTAACAA
CACTCAACAGGCTTCATCTCTGAATCCTGGCACATCACATCATCATGCAT
GTTCGCCGGTTCCTGCATCGGCATCGTCTTTCTCGTCATTTGTCTCGAAC
TCCTCCGTCGCATGGCCAGCGAATACGACGCGTTCATCATCAACCGCGCC
AGGCTTAAAGCCGATACCGGGGACGGTCGACCCGGCGTCACTTCCATAGA
CGACACATTTGCTGCCAGAAAACCAACGCCATGGACACCATCAGGTTCAC
TTTCAGCTCTGCCTCCAGTTCCAGAGGCACCACGGGCGTCTGAGCCAACG
CCGGCTGCGCCAGCCTCAGCTACAAAACAGGACCAGACCCAATTCATCTT
CCGGCCCAGCCAGGGTGAGCGGATCATCCGGGCCACCTTGCATGTGTTGC
AGTTTGCAGTGGCTTATTTCGTGATGCTTCTGGGGATGTACTACAATGGG
TACATTATCGTTTGTATCTTTGTTGGGGCGTTCGTGGGGTTTCTGCTCTT
TTCGTCCGGGAAGGTGGTTGGTGATGAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1877970..1878700- >CAN33_3000-T1 ID=CAN33_3000-T1|Name=CAN33_3000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1836bp|location=Sequence derived from alignment at NKJJ01000004.1:1877970..1878700- (Aspergillus niger FDAARGOS_311)
GCTTCATCTCTGAATCCTGGCACATCACATCATCATGCATGTTCGCCGGT
TCCTGCATCGGCATCGTCTTTCTCGTCATTTGTCTCGAACTCCTCCGTCG
CATGGCCAGCGAATACGACGCGTTCATCATCAACCGCGCCAGGCTTAAAG
CCGATACCGGGGACGGTCGACCCGGCGTCACTTCCATAGACGACACATTT
GCTGCCAGAAAACCAACGCCATGGACACCATCAGGTTCACTTTCAGCTCT
GCCTCCAGTTCCAGAGGCACCACGGGCGTCTGAGCCAACGCCGGCTGCGC
CAGCCTCAGCTACAAAACAGGACCAGACCCAATTCATCTTCCGGCCCAGC
CAGGGTGAGCGGATCATCCGGGCCACCTTGCATGTGTTGCAGTTTGCAGT
GGCTTATTTCGTGATGCTTCTGGGGATGTACTACAATGGGTACATTATCG
TTTGTATCTTTGTTGGGGCGTTCGTGGGGTTTCTGCTCTTTTCGTCCGGG
AAGGTGGTTGGTGATGAGTGAATGCTCTGGAACTGGAACACCGTGGATGC
ATATGGATATGACTTCATCAACCATTGACATCAGCATGGACTCACCCAGC
TGCAAGATCTCGGCTTCATCTCTGAATCCTGGCACATCACATCATCATGC
ATGTTCGCCGGTTCCTGCATCGGCATCGTCTTTCTCGTCATTTGTCTCGA
ACTCCTCCGTCGCATGGCCAGCGAATACGACGCGTTCATCATCAACCGCG
CCAGGCTTAAAGCCGATACCGGGGACGGTCGACCCGGCGTCACTTCCATA
GACGACACATTTGCTGCCAGAAAACCAACGCCATGGACACCATCAGGTTC
ACTTTCAGCTCTGCCTCCAGTTCCAGAGGCACCACGGGCGTCTGAGCCAA
CGCCGGCTGCGCCAGCCTCAGCTACAAAACAGGACCAGACCCAATTCATC
TTCCGGCCCAGCCAGGGTGAGCGGATCATCCGGGCCACCTTGCATGTGTT
GCAGTTTGCAGTGGCTTATTTCGTGATGCTTCTGGGGATGTACTACAATG
GGTACATTATCGTTTGTATCTTTGTTGGGGCGTTCGTGGGGTTTCTGCTC
TTTTCGTCCGGGAAGGTGGTTGGTGATGAGTGAATGCTCTGGAACTGGAA
CACCGTGGATGCATATGGATATGACTTCATCAACCATTGACATCAGCATG
GACTCACCCAGCTGCAAGATCTCGGCTTCATCTCTGAATCCTGGCACATC
ACATCATCATGCATGTTCGCCGGTTCCTGCATCGGCATCGTCTTTCTCGT
CATTTGTCTCGAACTCCTCCGTCGCATGGCCAGCGAATACGACGCGTTCA
TCATCAACCGCGCCAGGCTTAAAGCCGATACCGGGGACGGTCGACCCGGC
GTCACTTCCATAGACGACACATTTGCTGCCAGAAAACCAACGCCATGGAC
ACCATCAGGTTCACTTTCAGCTCTGCCTCCAGTTCCAGAGGCACCACGGG
CGTCTGAGCCAACGCCGGCTGCGCCAGCCTCAGCTACAAAACAGGACCAG
ACCCAATTCATCTTCCGGCCCAGCCAGGGTGAGCGGATCATCCGGGCCAC
CTTGCATGTGTTGCAGTTTGCAGTGGCTTATTTCGTGATGCTTCTGGGGA
TGTACTACAATGGGTACATTATCGTTTGTATCTTTGTTGGGGCGTTCGTG
GGGTTTCTGCTCTTTTCGTCCGGGAAGGTGGTTGGTGATGAGTGAATGCT
CTGGAACTGGAACACCGTGGATGCATATGGATATGACTTCATCAACCATT
GACATCAGCATGGACTCACCCAGCTGCAAGATCTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0035434 | copper ion transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005375 | copper ion transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007274 |
| DBxref | PFAM:PF04145 |
| Product | Ctr copper transporter family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1877970..1878700 - |
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