|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:316010..316713- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_30240-T1 ID=CAN33_30240-T1|Name=CAN33_30240-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=704bp|location=Sequence derived from alignment at NKJJ01000003.1:316010..316713- (Aspergillus niger FDAARGOS_311)
ATGAAGGCTTACTGGTACGATAACAAGCCGGTGAGTCTATACAATCTATC
CCGCTTAGCCTTTGCCCCCCGCCTGCATGGCTTCATTACCCCTCAATTGG
TTACCATAATGGCATACTAACATCTCATCACTATCAGGGCGACCAGCGCG
AACCCCACGACGACGGTCGTCCCGTCGACGAAGCCTACCTCGCCTCCCTG
GGTGTCTTCTACAAGTACTGCCCGAGCATCGAGGACGTTGACGCCCTGGC
AGCCGAGCGCGGATACAAGAACCGCGATGAGGTCACCGTGTCCCCCAAGA
CCATGGGTGATGTGTACGAGGAGAAGGTGAAGATGTTCTTCCACGAACAT
CTCCACGAGGACGAGGAAATCCGCTACATCCGGGATGGTGAGGGATACTT
TGATGTCCGTGGCAAGGAGGACGAGTGGGTCCGCATTAAGTTGGTGAAGG
ATGATCTGATTATTCTCCCCGCGGGTATCTACCATCGCTTTACGACGGAT
GAAAAGAACGTAAGTACATGTGAACTGGGGATGTGGTGTTTTGATGGGTG
CTAACGGGTCTGGATTTAGTATGTCAAGGCTATGCGTCTCTTCCAGGAGG
AACCCAAGTGGACTCCCTTGAACCGTAGCAACGAACTGGATGAGAACCCG
CACCGCGTGTCTTACCTCGGTAGTCTGGGTAAGGCTGCTGTTGCTGCTGT
TTAA back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:316010..316713- >CAN33_30240-T1 ID=CAN33_30240-T1|Name=CAN33_30240-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1611bp|location=Sequence derived from alignment at NKJJ01000003.1:316010..316713- (Aspergillus niger FDAARGOS_311)
TATGTCAAGGCTATGCGTCTCTTCCAGGAGGAACCCAAGTGGACTCCCTT
GAACCGTAGCAACGAACTGGATGAGAACCCGCACCGCGTGTCTTACCTCG
GTAGTCTGGGTAAGGCTGCTGTTGCTGCTGTTTAAGGCGACCAGCGCGAA
CCCCACGACGACGGTCGTCCCGTCGACGAAGCCTACCTCGCCTCCCTGGG
TGTCTTCTACAAGTACTGCCCGAGCATCGAGGACGTTGACGCCCTGGCAG
CCGAGCGCGGATACAAGAACCGCGATGAGGTCACCGTGTCCCCCAAGACC
ATGGGTGATGTGTACGAGGAGAAGGTGAAGATGTTCTTCCACGAACATCT
CCACGAGGACGAGGAAATCCGCTACATCCGGGATGGTGAGGGATACTTTG
ATGTCCGTGGCAAGGAGGACGAGTGGGTCCGCATTAAGTTGGTGAAGGAT
GATCTGATTATTCTCCCCGCGGGTATCTACCATCGCTTTACGACGGATGA
AAAGAACATGAAGGCTTACTGGTACGATAACAAGCCGTATGTCAAGGCTA
TGCGTCTCTTCCAGGAGGAACCCAAGTGGACTCCCTTGAACCGTAGCAAC
GAACTGGATGAGAACCCGCACCGCGTGTCTTACCTCGGTAGTCTGGGTAA
GGCTGCTGTTGCTGCTGTTTAAGGCGACCAGCGCGAACCCCACGACGACG
GTCGTCCCGTCGACGAAGCCTACCTCGCCTCCCTGGGTGTCTTCTACAAG
TACTGCCCGAGCATCGAGGACGTTGACGCCCTGGCAGCCGAGCGCGGATA
CAAGAACCGCGATGAGGTCACCGTGTCCCCCAAGACCATGGGTGATGTGT
ACGAGGAGAAGGTGAAGATGTTCTTCCACGAACATCTCCACGAGGACGAG
GAAATCCGCTACATCCGGGATGGTGAGGGATACTTTGATGTCCGTGGCAA
GGAGGACGAGTGGGTCCGCATTAAGTTGGTGAAGGATGATCTGATTATTC
TCCCCGCGGGTATCTACCATCGCTTTACGACGGATGAAAAGAACATGAAG
GCTTACTGGTACGATAACAAGCCGTATGTCAAGGCTATGCGTCTCTTCCA
GGAGGAACCCAAGTGGACTCCCTTGAACCGTAGCAACGAACTGGATGAGA
ACCCGCACCGCGTGTCTTACCTCGGTAGTCTGGGTAAGGCTGCTGTTGCT
GCTGTTTAAGGCGACCAGCGCGAACCCCACGACGACGGTCGTCCCGTCGA
CGAAGCCTACCTCGCCTCCCTGGGTGTCTTCTACAAGTACTGCCCGAGCA
TCGAGGACGTTGACGCCCTGGCAGCCGAGCGCGGATACAAGAACCGCGAT
GAGGTCACCGTGTCCCCCAAGACCATGGGTGATGTGTACGAGGAGAAGGT
GAAGATGTTCTTCCACGAACATCTCCACGAGGACGAGGAAATCCGCTACA
TCCGGGATGGTGAGGGATACTTTGATGTCCGTGGCAAGGAGGACGAGTGG
GTCCGCATTAAGTTGGTGAAGGATGATCTGATTATTCTCCCCGCGGGTAT
CTACCATCGCTTTACGACGGATGAAAAGAACATGAAGGCTTACTGGTACG
ATAACAAGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019509 | L-methionine salvage from methylthioadenosine |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
| GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR027496 |
| DBxref | InterPro:IPR014710 |
| DBxref | InterPro:IPR004313 |
| DBxref | PFAM:PF07883 |
| DBxref | PFAM:PF03079 |
| Product | 2-dihydroxy-3-keto-5-methylthiopentene dioxygenase |
| Product | 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:316010..316713 - |
|
