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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:508792..510843- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_30515-T1 ID=CAN33_30515-T1|Name=CAN33_30515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2052bp|location=Sequence derived from alignment at NKJJ01000003.1:508792..510843- (Aspergillus niger FDAARGOS_311)
ATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGGTAGTCCTGTGGTC
GAAATCGTACGCGCCCGTCGGGGCGCATATTGTTAACAGCCTTATCAATG
ATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAACGAACAATGCTGCC
CCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGAAAAGAGTGAAGGA
ATTCGACTTGATCTTTGTGGTATGCTGTTGTCTCCGACCGCGTCTCAGCT
CTTCTGTCTCTGACCGCAAATCGCTCTAGGCCGTCTATCAGTCTCTCTTA
CAGCTTGGTTGGATCGACAAACTCCTGGACAACATTTCCACCCTGTACAT
CGATTTGTACAAGGATCAATTACGAAGTACTCGCGCAAGGATAGCACAGT
ACCCCTTTGACAAATACTTTGACCAGCAAGTTCGGGAGCTTGAGGATAAG
TCGGGGCCTATCTCTTCGGAGGCATTCGTGGCTCATGCGGTCGATAAGAA
AGACCCGCTGGTATCGTCTGACAATGGCGGCCCCCCTCCGCCACCTGTGC
CTGGTCTTCTCAAAGGTATGCATCTAAATGGGCCTTATAAAATGTAACGA
TACTAACATTCCTAAAGCGCAGCATCAAGCTGCGCTAGCCGGGGCGACCT
CTGATGAGAGTACGCCACCGCACACCCCGGATACATCGCGGTCATCCACC
CCTGTTGCGAACCACATCATAACTGCCAAGGGGGGCCAGCTGGCCGAGTT
TCACGTCGTGCACGCAAGGCCGCTAACGCCAGCGCCAATGCTTCCTCAGG
CGACGAAAACCGCAAAGGAAAGACACCCAAGAGCGGAAAAAAGATGCGCA
AGTGGGATGCCGATGGATTTGCCGATGAAGATGATGGTCAGATCCTCGAC
TACTCAGCCCATGCTGACGGTGAAGAAGCCGCTGCTCCAGCTGTGGAAGG
CGTGTCGCAAGATTCTTGGGGACGCAGAACTGGCAAGGGCCAGTTCGTAC
TGAAAGATTTGGGAGACGAAGTTCACTCGATTTTGGAAAATGCAGAAAGC
GACAAAGCAAAGGATGTGTCCTCTGCTGGTTTCGTCGGTTCAGGTTTCAA
TGCCATTGGAGGTCTTCTACGTAATATCGTGGGCGGGAAGACCCTTACCG
AAGCAGATTTGGAGAAGCCCTTGAAGACCATGGAAGATCATTTGTTGAGG
AAGAACGTTGCACGCGAGGCCGCGGTCCGGCTGTGTGAGGGTGTCCAGCG
GGAGCTCGTGGGGAAAAAAACAGGCAATTTCCAAAGTGTGGATGCTGCTT
TGCGCTCGGCCATGGAGTCATCTCTTCGGAAAATACTGACGCCTACCTCC
TCTCTTGATCTGCTCCGTGAAATCGATGCGGTTACGTCTCCCACTAGCAA
GCAGCAATCTCCTCGTCCTTATGTTATTTCGATCGTTGGTGTCAACGGCG
TTGGAAAGTCGACGAACTTGGGAAAGATTTGCTATTTTCTACTGCAGAAC
AAATACCGTGTTCTCATCGCCGCATGCGATACTTTCCGATCTGGAGCTGT
GGAACAGCTACGTGTTCATGCACGGAACCTCAGGGAACTCAGTGCCCGCG
AGAACGTTGGCGAGGTTGAGCTGTACGAGAAGGGTTACGGAAAGGATGCA
GCAAACGTGGCGAAGGATGCTGTCGAATACGGAGCTGCCAACCACTTCGA
TGTCGTCCTTATCGATACTGCCGGCCGCCGACACAACGACCAGCGCCTCA
TGTCCTCGCTGGAGAAGTTTGCTAAATTTGCTAATCCAGACAAGATCTTC
ATGGTTGGCGAAGCCTTGGTTGGTACGGACAGTGTGATGCAGGCTCGCAA
TTTCAACCAGGCCTTCGGTACTGGGCGGAACCTTGACGGCTTCATCATCA
GCAAATGTGATACAGTTGGTGACATGGTGGGGACGCTGGTCAGCATGGTG
CATGCTACAGGTATTCCCATTGTCTTCTTGGGAGTTGGTCAGCATTATGG
TGACCTGAGAGGACTCAGTGTCCCTTGGGCTGTCAATTTGTTGATGAAGT
GA back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:508792..510843- >CAN33_30515-T1 ID=CAN33_30515-T1|Name=CAN33_30515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7476bp|location=Sequence derived from alignment at NKJJ01000003.1:508792..510843- (Aspergillus niger FDAARGOS_311)
GGGGGCCAGCTGGCCGAGTTTCACGTCGTGCACGCAAGGCCGCTAACGCC
AGCGCCAATGCTTCCTCAGGCGACGAAAACCGCAAAGGAAAGACACCCAA
GAGCGGAAAAAAGATGCGCAAGTGGGATGCCGATGGATTTGCCGATGAAG
ATGATGGTCAGATCCTCGACTACTCAGCCCATGCTGACGGTGAAGAAGCC
GCTGCTCCAGCTGTGGAAGGCGTGTCGCAAGATTCTTGGGGACGCAGAAC
TGGCAAGGGCCAGTTCGTACTGAAAGATTTGGGAGACGAAGTTCACTCGA
TTTTGGAAAATGCAGAAAGCGACAAAGCAAAGGATGTGTCCTCTGCTGGT
TTCGTCGGTTCAGGTTTCAATGCCATTGGAGGTCTTCTACGTAATATCGT
GGGCGGGAAGACCCTTACCGAAGCAGATTTGGAGAAGCCCTTGAAGACCA
TGGAAGATCATTTGTTGAGGAAGAACGTTGCACGCGAGGCCGCGGTCCGG
CTGTGTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAAAAAACAGGCAATTT
CCAAAGTGTGGATGCTGCTTTGCGCTCGGCCATGGAGTCATCTCTTCGGA
AAATACTGACGCCTACCTCCTCTCTTGATCTGCTCCGTGAAATCGATGCG
GTTACGTCTCCCACTAGCAAGCAGCAATCTCCTCGTCCTTATGTTATTTC
GATCGTTGGTGTCAACGGCGTTGGAAAGTCGACGAACTTGGGAAAGATTT
GCTATTTTCTACTGCAGAACAAATACCGTGTTCTCATCGCCGCATGCGAT
ACTTTCCGATCTGGAGCTGTGGAACAGCTACGTGTTCATGCACGGAACCT
CAGGGAACTCAGTGCCCGCGAGAACGTTGGCGAGGTTGAGCTGTACGAGA
AGGGTTACGGAAAGGATGCAGCAAACGTGGCGAAGGATGCTGTCGAATAC
GGAGCTGCCAACCACTTCGATGTCGTCCTTATCGATACTGCCGGCCGCCG
ACACAACGACCAGCGCCTCATGTCCTCGCTGGAGAAGTTTGCTAAATTTG
CTAATCCAGACAAGATCTTCATGGTTGGCGAAGCCTTGGTTGGTACGGAC
AGTGTGATGCAGGCTCGCAATTTCAACCAGGCCTTCGGTACTGGGCGGAA
CCTTGACGGCTTCATCATCAGCAAATGTGATACAGTTGGTGACATGGTGG
GGACGCTGGTCAGCATGGTGCATGCTACAGGTATTCCCATTGTCTTCTTG
GGAGTTGGTCAGCATTATGGTGACCTGAGAGGACTCAGTGTCCCTTGGGC
TGTCAATTTGTTGATGAAGTGACGCAGCATCAAGCTGCGCTAGCCGGGGC
GACCTCTGATGAGAGCCGTCTATCAGTCTCTCTTACAGCTTGGTTGGATC
GACAAACTCCTGGACAACATTTCCACCCTGTACATCGATTTGTACAAGGA
TCAATTACGAAGTACTCGCGCAAGGATAGCACAGTACCCCTTTGACAAAT
ACTTTGACCAGCAAGTTCGGGAGCTTGAGGATAAGTCGGGGCCTATCTCT
TCGGAGGCATTCGTGGCTCATGCGGTCGATAAGAAAGACCCGCTGGTATC
GTCTGACAATGGCGGCCCCCCTCCGCCACCTGTGCCTGGTCTTCTCAAAG
ATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGGTAGTCCTGTGGTC
GAAATCGTACGCGCCCGTCGGGGCGCATATTGTTAACAGCCTTATCAATG
ATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAACGAACAATGCTGCC
CCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGAAAAGAGTGAAGGA
ATTCGACTTGATCTTTGTGGGGGGCCAGCTGGCCGAGTTTCACGTCGTGC
ACGCAAGGCCGCTAACGCCAGCGCCAATGCTTCCTCAGGCGACGAAAACC
GCAAAGGAAAGACACCCAAGAGCGGAAAAAAGATGCGCAAGTGGGATGCC
GATGGATTTGCCGATGAAGATGATGGTCAGATCCTCGACTACTCAGCCCA
TGCTGACGGTGAAGAAGCCGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAG
ATTCTTGGGGACGCAGAACTGGCAAGGGCCAGTTCGTACTGAAAGATTTG
GGAGACGAAGTTCACTCGATTTTGGAAAATGCAGAAAGCGACAAAGCAAA
GGATGTGTCCTCTGCTGGTTTCGTCGGTTCAGGTTTCAATGCCATTGGAG
GTCTTCTACGTAATATCGTGGGCGGGAAGACCCTTACCGAAGCAGATTTG
GAGAAGCCCTTGAAGACCATGGAAGATCATTTGTTGAGGAAGAACGTTGC
ACGCGAGGCCGCGGTCCGGCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGG
GGAAAAAAACAGGCAATTTCCAAAGTGTGGATGCTGCTTTGCGCTCGGCC
ATGGAGTCATCTCTTCGGAAAATACTGACGCCTACCTCCTCTCTTGATCT
GCTCCGTGAAATCGATGCGGTTACGTCTCCCACTAGCAAGCAGCAATCTC
CTCGTCCTTATGTTATTTCGATCGTTGGTGTCAACGGCGTTGGAAAGTCG
ACGAACTTGGGAAAGATTTGCTATTTTCTACTGCAGAACAAATACCGTGT
TCTCATCGCCGCATGCGATACTTTCCGATCTGGAGCTGTGGAACAGCTAC
GTGTTCATGCACGGAACCTCAGGGAACTCAGTGCCCGCGAGAACGTTGGC
GAGGTTGAGCTGTACGAGAAGGGTTACGGAAAGGATGCAGCAAACGTGGC
GAAGGATGCTGTCGAATACGGAGCTGCCAACCACTTCGATGTCGTCCTTA
TCGATACTGCCGGCCGCCGACACAACGACCAGCGCCTCATGTCCTCGCTG
GAGAAGTTTGCTAAATTTGCTAATCCAGACAAGATCTTCATGGTTGGCGA
AGCCTTGGTTGGTACGGACAGTGTGATGCAGGCTCGCAATTTCAACCAGG
CCTTCGGTACTGGGCGGAACCTTGACGGCTTCATCATCAGCAAATGTGAT
ACAGTTGGTGACATGGTGGGGACGCTGGTCAGCATGGTGCATGCTACAGG
TATTCCCATTGTCTTCTTGGGAGTTGGTCAGCATTATGGTGACCTGAGAG
GACTCAGTGTCCCTTGGGCTGTCAATTTGTTGATGAAGTGACGCAGCATC
AAGCTGCGCTAGCCGGGGCGACCTCTGATGAGAGCCGTCTATCAGTCTCT
CTTACAGCTTGGTTGGATCGACAAACTCCTGGACAACATTTCCACCCTGT
ACATCGATTTGTACAAGGATCAATTACGAAGTACTCGCGCAAGGATAGCA
CAGTACCCCTTTGACAAATACTTTGACCAGCAAGTTCGGGAGCTTGAGGA
TAAGTCGGGGCCTATCTCTTCGGAGGCATTCGTGGCTCATGCGGTCGATA
AGAAAGACCCGCTGGTATCGTCTGACAATGGCGGCCCCCCTCCGCCACCT
GTGCCTGGTCTTCTCAAAGATGTTGGAAGCATTCGAGATCTTGACTGCCT
CAGGGGTAGTCCTGTGGTCGAAATCGTACGCGCCCGTCGGGGCGCATATT
GTTAACAGCCTTATCAATGATGTCTTCATCGAGGAGAAGGTCCAGCTTCA
GGCAACGAACAATGCTGCCCCTTCGTTCAAGAAAGAGAAGTACACTCTAA
AGTGGAAAAGAGTGAAGGAATTCGACTTGATCTTTGTGGGGGGCCAGCTG
GCCGAGTTTCACGTCGTGCACGCAAGGCCGCTAACGCCAGCGCCAATGCT
TCCTCAGGCGACGAAAACCGCAAAGGAAAGACACCCAAGAGCGGAAAAAA
GATGCGCAAGTGGGATGCCGATGGATTTGCCGATGAAGATGATGGTCAGA
TCCTCGACTACTCAGCCCATGCTGACGGTGAAGAAGCCGCTGCTCCAGCT
GTGGAAGGCGTGTCGCAAGATTCTTGGGGACGCAGAACTGGCAAGGGCCA
GTTCGTACTGAAAGATTTGGGAGACGAAGTTCACTCGATTTTGGAAAATG
CAGAAAGCGACAAAGCAAAGGATGTGTCCTCTGCTGGTTTCGTCGGTTCA
GGTTTCAATGCCATTGGAGGTCTTCTACGTAATATCGTGGGCGGGAAGAC
CCTTACCGAAGCAGATTTGGAGAAGCCCTTGAAGACCATGGAAGATCATT
TGTTGAGGAAGAACGTTGCACGCGAGGCCGCGGTCCGGCTGTGTGAGGGT
GTCCAGCGGGAGCTCGTGGGGAAAAAAACAGGCAATTTCCAAAGTGTGGA
TGCTGCTTTGCGCTCGGCCATGGAGTCATCTCTTCGGAAAATACTGACGC
CTACCTCCTCTCTTGATCTGCTCCGTGAAATCGATGCGGTTACGTCTCCC
ACTAGCAAGCAGCAATCTCCTCGTCCTTATGTTATTTCGATCGTTGGTGT
CAACGGCGTTGGAAAGTCGACGAACTTGGGAAAGATTTGCTATTTTCTAC
TGCAGAACAAATACCGTGTTCTCATCGCCGCATGCGATACTTTCCGATCT
GGAGCTGTGGAACAGCTACGTGTTCATGCACGGAACCTCAGGGAACTCAG
TGCCCGCGAGAACGTTGGCGAGGTTGAGCTGTACGAGAAGGGTTACGGAA
AGGATGCAGCAAACGTGGCGAAGGATGCTGTCGAATACGGAGCTGCCAAC
CACTTCGATGTCGTCCTTATCGATACTGCCGGCCGCCGACACAACGACCA
GCGCCTCATGTCCTCGCTGGAGAAGTTTGCTAAATTTGCTAATCCAGACA
AGATCTTCATGGTTGGCGAAGCCTTGGTTGGTACGGACAGTGTGATGCAG
GCTCGCAATTTCAACCAGGCCTTCGGTACTGGGCGGAACCTTGACGGCTT
CATCATCAGCAAATGTGATACAGTTGGTGACATGGTGGGGACGCTGGTCA
GCATGGTGCATGCTACAGGTATTCCCATTGTCTTCTTGGGAGTTGGTCAG
CATTATGGTGACCTGAGAGGACTCAGTGTCCCTTGGGCTGTCAATTTGTT
GATGAAGTGACGCAGCATCAAGCTGCGCTAGCCGGGGCGACCTCTGATGA
GAGCCGTCTATCAGTCTCTCTTACAGCTTGGTTGGATCGACAAACTCCTG
GACAACATTTCCACCCTGTACATCGATTTGTACAAGGATCAATTACGAAG
TACTCGCGCAAGGATAGCACAGTACCCCTTTGACAAATACTTTGACCAGC
AAGTTCGGGAGCTTGAGGATAAGTCGGGGCCTATCTCTTCGGAGGCATTC
GTGGCTCATGCGGTCGATAAGAAAGACCCGCTGGTATCGTCTGACAATGG
CGGCCCCCCTCCGCCACCTGTGCCTGGTCTTCTCAAAGATGTTGGAAGCA
TTCGAGATCTTGACTGCCTCAGGGGTAGTCCTGTGGTCGAAATCGTACGC
GCCCGTCGGGGCGCATATTGTTAACAGCCTTATCAATGATGTCTTCATCG
AGGAGAAGGTCCAGCTTCAGGCAACGAACAATGCTGCCCCTTCGTTCAAG
AAAGAGAAGTACACTCTAAAGTGGAAAAGAGTGAAGGAATTCGACTTGAT
CTTTGTGGGGGGCCAGCTGGCCGAGTTTCACGTCGTGCACGCAAGGCCGC
TAACGCCAGCGCCAATGCTTCCTCAGGCGACGAAAACCGCAAAGGAAAGA
CACCCAAGAGCGGAAAAAAGATGCGCAAGTGGGATGCCGATGGATTTGCC
GATGAAGATGATGGTCAGATCCTCGACTACTCAGCCCATGCTGACGGTGA
AGAAGCCGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAGATTCTTGGGGAC
GCAGAACTGGCAAGGGCCAGTTCGTACTGAAAGATTTGGGAGACGAAGTT
CACTCGATTTTGGAAAATGCAGAAAGCGACAAAGCAAAGGATGTGTCCTC
TGCTGGTTTCGTCGGTTCAGGTTTCAATGCCATTGGAGGTCTTCTACGTA
ATATCGTGGGCGGGAAGACCCTTACCGAAGCAGATTTGGAGAAGCCCTTG
AAGACCATGGAAGATCATTTGTTGAGGAAGAACGTTGCACGCGAGGCCGC
GGTCCGGCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAAAAAACAG
GCAATTTCCAAAGTGTGGATGCTGCTTTGCGCTCGGCCATGGAGTCATCT
CTTCGGAAAATACTGACGCCTACCTCCTCTCTTGATCTGCTCCGTGAAAT
CGATGCGGTTACGTCTCCCACTAGCAAGCAGCAATCTCCTCGTCCTTATG
TTATTTCGATCGTTGGTGTCAACGGCGTTGGAAAGTCGACGAACTTGGGA
AAGATTTGCTATTTTCTACTGCAGAACAAATACCGTGTTCTCATCGCCGC
ATGCGATACTTTCCGATCTGGAGCTGTGGAACAGCTACGTGTTCATGCAC
GGAACCTCAGGGAACTCAGTGCCCGCGAGAACGTTGGCGAGGTTGAGCTG
TACGAGAAGGGTTACGGAAAGGATGCAGCAAACGTGGCGAAGGATGCTGT
CGAATACGGAGCTGCCAACCACTTCGATGTCGTCCTTATCGATACTGCCG
GCCGCCGACACAACGACCAGCGCCTCATGTCCTCGCTGGAGAAGTTTGCT
AAATTTGCTAATCCAGACAAGATCTTCATGGTTGGCGAAGCCTTGGTTGG
TACGGACAGTGTGATGCAGGCTCGCAATTTCAACCAGGCCTTCGGTACTG
GGCGGAACCTTGACGGCTTCATCATCAGCAAATGTGATACAGTTGGTGAC
ATGGTGGGGACGCTGGTCAGCATGGTGCATGCTACAGGTATTCCCATTGT
CTTCTTGGGAGTTGGTCAGCATTATGGTGACCTGAGAGGACTCAGTGTCC
CTTGGGCTGTCAATTTGTTGATGAAGTGACGCAGCATCAAGCTGCGCTAG
CCGGGGCGACCTCTGATGAGAGCCGTCTATCAGTCTCTCTTACAGCTTGG
TTGGATCGACAAACTCCTGGACAACATTTCCACCCTGTACATCGATTTGT
ACAAGGATCAATTACGAAGTACTCGCGCAAGGATAGCACAGTACCCCTTT
GACAAATACTTTGACCAGCAAGTTCGGGAGCTTGAGGATAAGTCGGGGCC
TATCTCTTCGGAGGCATTCGTGGCTCATGCGGTCGATAAGAAAGACCCGC
TGGTATCGTCTGACAATGGCGGCCCCCCTCCGCCACCTGTGCCTGGTCTT
CTCAAAGATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGGTAGTCC
TGTGGTCGAAATCGTACGCGCCCGTCGGGGCGCATATTGTTAACAGCCTT
ATCAATGATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAACGAACAA
TGCTGCCCCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGAAAAGAG
TGAAGGAATTCGACTTGATCTTTGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005785 | signal recognition particle receptor complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005047 | signal recognition particle binding |
| GO:0005525 | GTP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006886 | intracellular protein transport |
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR036225 |
| DBxref | InterPro:IPR042101 |
| DBxref | InterPro:IPR007222 |
| DBxref | InterPro:IPR013822 |
| DBxref | InterPro:IPR000897 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF02881 |
| DBxref | PFAM:PF00448 |
| DBxref | PFAM:PF04086 |
| Product | Signal recognition particle alpha subunit N-terminal family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:508792..510843 - |
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