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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:912448..913494- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_31175-T1 ID=CAN33_31175-T1|Name=CAN33_31175-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1047bp|location=Sequence derived from alignment at NKJJ01000003.1:912448..913494- (Aspergillus niger FDAARGOS_311)
ATGTGGACCCATCTACCATCCCTCTGTGCCCTAGGCCTCACGCTAATCAC
ATGTGTGATAACCTCACCCATTGAAATCCGAGCCACCGGACCCTGGCTAG
CCCTCGACACGGACTTCCCAGACCCCGGCTTCGTCCAAGCCGACGACGGC
ACCTGGTACGCCTTCGGGACGAACGGCAACAACCGCACGGTGCAAGTAGC
CAAGTCCGCAGACTTCAAAACATGGACCCTCCTCGACAAAGAAGCCCTCC
CCACTTTAGCAGGCTGGGAGACCCAAATTGACCACTGGGCCCCAGACGTA
GTCCGCCGTGTACATTCCCCATCCCATCCCGTCCCATCCCCTTCCCCCAA
ATACAAAACTAACCACCACCACCACCCCCAGAACGACGGCAAATACGTCC
TCTACTACAGCGGCGAAGCACAACAAATGCTCCGCCACCACTGCATCGGC
ACCGCAGTCTCAGAATCCACCGATCCCAGCGGGCCCTACATCCCAAACCC
GACGCCCCTCTCCTGTCGACTCGACCAAGGCGGCAGCATCGACGCGTCCG
GCTTCCTAGACAAAGACGGCTCACGCTACGTCGTGTTCAAAGTGGACGGC
AACAGCATCGGCAACGGCGGGGACTGCAACAACGGCATTGCGCCATTGAA
ACCCACCCCGGTTCTTCTTCAAAAGGTAGATACGGACGGGTTTACCCCCG
TCGGCGACGCGGTGCAGATCCTGGACCGCGATGATAGCGACGGGCCTTTG
GTAGAGGCCCCGAATTTGATCCTCCATGGGGACACGTACTTTTTGTTTTA
CTCGACGCATTGCTATACGGATGAGAAGTATGATGTGCGGTGGGCGACGG
CGAGTGAGATTACGGGTCCGTATACGAAGACGGGGAGGCAGTTGGTGAAA
TCTGGGGATTATGGGCTTGTTTCGCCGGGGGGTGGGACGGTTTGTGGGTG
TGGGGATCGCATGCTGTTTCATGGGTTTTGTGGTGATAATAGGTGTATGT
ATGCGGCTGAGGTGAGGATTACGGGGACGGAGGTGGAGTTTGTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:912448..913494- >CAN33_31175-T1 ID=CAN33_31175-T1|Name=CAN33_31175-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1872bp|location=Sequence derived from alignment at NKJJ01000003.1:912448..913494- (Aspergillus niger FDAARGOS_311)
CACAACAAATGCTCCGCCACCACTGCATCGGCACCGCAGTCTCAGAATCC
ACCGATCCCAGCGGGCCCTACATCCCAAACCCGACGCCCCTCTCCTGTCG
ACTCGACCAAGGCGGCAGCATCGACGCGTCCGGCTTCCTAGACAAAGACG
GCTCACGCTACGTCGTGTTCAAAGTGGACGGCAACAGCATCGGCAACGGC
GGGGACTGCAACAACGGCATTGCGCCATTGAAACCCACCCCGGTTCTTCT
TCAAAAGGTAGATACGGACGGGTTTACCCCCGTCGGCGACGCGGTGCAGA
TCCTGGACCGCGATGATAGCGACGGGCCTTTGGTAGAGGCCCCGAATTTG
ATCCTCCATGGGGACACGTACTTTTTGTTTTACTCGACGCATTGCTATAC
GGATGAGAAGTATGATGTGCGGTGGGCGACGGCGAGTGAGATTACGGGTC
CGTATACGAAGACGGGGAGGCAGTTGGTGAAATCTGGGGATTATGGGCTT
GTTTCGCCGGGGGGTGGGACGGTTTGTGGGTGTGGGGATCGCATGCTGTT
TCATGGGTTTTGTGGTGATAATAGGTGTATGTATGCGGCTGAGGTGAGGA
TTACGGGGACGGAGGTGGAGTTTGTTTAGATGTGGACCCATCTACCATCC
CTCTGTGCCCTAGGCCTCACGCTAATCACATGTGTGATAACCTCACCCAT
TGAAATCCGAGCCACCGGACCCTGGCTAGCCCTCGACACGGACTTCCCAG
ACCCCGGCTTCGTCCAAGCCGACGACGGCACCTGGTACGCCTTCGGGACG
AACGGCAACAACCGCACGGTGCAAGTAGCCAAGTCCGCAGACTTCAAAAC
ATGGACCCTCCTCGACAAAGAAGCCCTCCCCACTTTAGCAGGCTGGGAGA
CCCAAATTGACCACTGGGCCCCAGACGTAGTCCGCCCACAACAAATGCTC
CGCCACCACTGCATCGGCACCGCAGTCTCAGAATCCACCGATCCCAGCGG
GCCCTACATCCCAAACCCGACGCCCCTCTCCTGTCGACTCGACCAAGGCG
GCAGCATCGACGCGTCCGGCTTCCTAGACAAAGACGGCTCACGCTACGTC
GTGTTCAAAGTGGACGGCAACAGCATCGGCAACGGCGGGGACTGCAACAA
CGGCATTGCGCCATTGAAACCCACCCCGGTTCTTCTTCAAAAGGTAGATA
CGGACGGGTTTACCCCCGTCGGCGACGCGGTGCAGATCCTGGACCGCGAT
GATAGCGACGGGCCTTTGGTAGAGGCCCCGAATTTGATCCTCCATGGGGA
CACGTACTTTTTGTTTTACTCGACGCATTGCTATACGGATGAGAAGTATG
ATGTGCGGTGGGCGACGGCGAGTGAGATTACGGGTCCGTATACGAAGACG
GGGAGGCAGTTGGTGAAATCTGGGGATTATGGGCTTGTTTCGCCGGGGGG
TGGGACGGTTTGTGGGTGTGGGGATCGCATGCTGTTTCATGGGTTTTGTG
GTGATAATAGGTGTATGTATGCGGCTGAGGTGAGGATTACGGGGACGGAG
GTGGAGTTTGTTTAGATGTGGACCCATCTACCATCCCTCTGTGCCCTAGG
CCTCACGCTAATCACATGTGTGATAACCTCACCCATTGAAATCCGAGCCA
CCGGACCCTGGCTAGCCCTCGACACGGACTTCCCAGACCCCGGCTTCGTC
CAAGCCGACGACGGCACCTGGTACGCCTTCGGGACGAACGGCAACAACCG
CACGGTGCAAGTAGCCAAGTCCGCAGACTTCAAAACATGGACCCTCCTCG
ACAAAGAAGCCCTCCCCACTTTAGCAGGCTGGGAGACCCAAATTGACCAC
TGGGCCCCAGACGTAGTCCGCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-21) |
| Note | CAZy:GH43_5 |
| Note | CAZy:GH43_31 |
| Note | CAZy:GH43_8 |
| Note | CAZy:GH43_3 |
| Note | CAZy:GH43 |
| Note | CAZy:GH43_30 |
| DBxref | InterPro:IPR006710 |
| DBxref | InterPro:IPR023296 |
| DBxref | PFAM:PF04616 |
| Product | Glycosyl hydrolases family 43 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:912448..913494 - |
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