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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:934086..935204+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_31195-T1 ID=CAN33_31195-T1|Name=CAN33_31195-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1119bp|location=Sequence derived from alignment at NKJJ01000003.1:934086..935204+ (Aspergillus niger FDAARGOS_311)
ATGGAATACCCGCCGCAGTATCAACAGCCTCATGGCCAGCATCCCCACGC
CTCCTCTCACATCACTGCCCCGTATCAGACAGCTCCCCAAAATGCTGGGT
CGACGGTGGGGTCAATGACTTCTCCCACCAACCCCCAAGCGCACATGCAA
CAAGCTCACGCGACACATCAAGCGTCTCCCATTGTTCCCTCACAATCTCA
TTATCAGCCTGCTCAAAATGCCCCGGGCTCTGTACATCAGCAAATGAATT
TCCCCCAGTCGTATGGAGTTACCACGGCGATGCCACAGACATATGGTATC
TCCCCTACGCAGGCAGCCGCAATGGCCACCGCTGCAGCATCGGGTCAATT
TTATCCTCTCCATCAAGACTCGATGGCTGGCCAGATGGCTCCGGGTCCCC
GCGGATCACCGCGCATGGCTGGGGTGCAGGTCAAGAGTGACCGCAATCCT
CGTTCACCACCCCAGATTCCCGGCCAGATGCCCTCAATGGGATCCCAGGT
ACAGATGTCCCAGAACGCCCAGATGCAGCAACGTCGCATGAGCCATGTCA
GTAGTCCACATGTTCAAAATGCGCAACCACTTATCAACCATGCTGGACGG
CCTTCGGTGCCCCCATCTATGCCGCCACCACCACAGCCGCCTGTTCAGCA
GAGCCAGCCTTCGCCGGATATGGTCGCCGGCGCCGCTGAGGAGTCACCTT
TATACGTGAACGCGAAGCAGTTTCATCGCATTTTGAAACGACGAGTGGCT
CGCCAGAAACTGGAGGAACAGTTGCGGCTTACTTCCAAGGGTCGCAAGCC
ATATCTGCACGAATCGCGTCATAACCATGCCATGCGCCGCCCTCGTGGTC
CTGGCGGGCGGTTCTTAACGGCTGACGAAGTGGCTGCTATGGAGAAGAAG
CAAGCATCGGGGTCTACGACCGCTGGACTCGAAGGCGCTGACGATAATGC
GGTGAAACCACCTGGCGATAACCCGCCATCCGCACAGAAACGAAAATCAA
GTGATGTCAACGATGACACCATCAATTCGTCTAAAAAGACGAAAACTAGC
GCCAAGCCAAGCACCAGTGCGGATGAAAGCGAGAATGAATCTGCTGAGCT
GTCCGACGAGGATGGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:934086..935204+ >CAN33_31195-T1 ID=CAN33_31195-T1|Name=CAN33_31195-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1119bp|location=Sequence derived from alignment at NKJJ01000003.1:934086..935204+ (Aspergillus niger FDAARGOS_311)
ATGGAATACCCGCCGCAGTATCAACAGCCTCATGGCCAGCATCCCCACGC
CTCCTCTCACATCACTGCCCCGTATCAGACAGCTCCCCAAAATGCTGGGT
CGACGGTGGGGTCAATGACTTCTCCCACCAACCCCCAAGCGCACATGCAA
CAAGCTCACGCGACACATCAAGCGTCTCCCATTGTTCCCTCACAATCTCA
TTATCAGCCTGCTCAAAATGCCCCGGGCTCTGTACATCAGCAAATGAATT
TCCCCCAGTCGTATGGAGTTACCACGGCGATGCCACAGACATATGGTATC
TCCCCTACGCAGGCAGCCGCAATGGCCACCGCTGCAGCATCGGGTCAATT
TTATCCTCTCCATCAAGACTCGATGGCTGGCCAGATGGCTCCGGGTCCCC
GCGGATCACCGCGCATGGCTGGGGTGCAGGTCAAGAGTGACCGCAATCCT
CGTTCACCACCCCAGATTCCCGGCCAGATGCCCTCAATGGGATCCCAGGT
ACAGATGTCCCAGAACGCCCAGATGCAGCAACGTCGCATGAGCCATGTCA
GTAGTCCACATGTTCAAAATGCGCAACCACTTATCAACCATGCTGGACGG
CCTTCGGTGCCCCCATCTATGCCGCCACCACCACAGCCGCCTGTTCAGCA
GAGCCAGCCTTCGCCGGATATGGTCGCCGGCGCCGCTGAGGAGTCACCTT
TATACGTGAACGCGAAGCAGTTTCATCGCATTTTGAAACGACGAGTGGCT
CGCCAGAAACTGGAGGAACAGTTGCGGCTTACTTCCAAGGGTCGCAAGCC
ATATCTGCACGAATCGCGTCATAACCATGCCATGCGCCGCCCTCGTGGTC
CTGGCGGGCGGTTCTTAACGGCTGACGAAGTGGCTGCTATGGAGAAGAAG
CAAGCATCGGGGTCTACGACCGCTGGACTCGAAGGCGCTGACGATAATGC
GGTGAAACCACCTGGCGATAACCCGCCATCCGCACAGAAACGAAAATCAA
GTGATGTCAACGATGACACCATCAATTCGTCTAAAAAGACGAAAACTAGC
GCCAAGCCAAGCACCAGTGCGGATGAAAGCGAGAATGAATCTGCTGAGCT
GTCCGACGAGGATGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263KEE |
| DBxref | InterPro:IPR001289 |
| DBxref | PFAM:PF02045 |
| Product | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:934086..935204 + |
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