You are here

Home

CAN33_31235-T1, CAN33_31235-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_31235-T1
Unique NameCAN33_31235-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:959529..961423-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_31235-T1 ID=CAN33_31235-T1|Name=CAN33_31235-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1895bp|location=Sequence derived from alignment at NKJJ01000003.1:959529..961423- (Aspergillus niger FDAARGOS_311)
ATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCTCTGCCGGCCGAAGA
CACCTGGGGCCCCGCTACCGCCAGCGACAACATGCTGCAGGGCGTCCCCT
ACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTATGGCTGACTGGACT
GCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAGGCCTACAACCGCAA
CTACAGAGGTATACCTTTATCCTAAATATATCCTAGCCAAGCCAAGACCA
AGCAACTAACTGTTTCCCTCCAGACCAGCAAGTCTACGGTGCCGGTTCCT
CCAGCCTCTTCGCCGTCCAGGTCGCCGAAGACGAATCTTCCTTCTCCGTT
GTCGACAACACCCGCAGCTCCGCTAAGCGTACCTTCGGCCGTGGCGGTGG
TACCGTCTTCCGTGGCCGCGCCCAGCGCGGTGGTGCCCAGCGCGGTGGTC
GTGCCGGCTTCCAGCGCGTGGGCGCTGGCCGTGGCCAGGGTGGTGACCGC
TACTACGACAACCGTTCTGGTGGCCGCGGCAACCGTGGCCGTCGCTTCGG
CTGGAAGGACTACGACAAGCCCCAGCGCACCCGTGAGCCTTCGGTCAACG
TCCGCCCCGACTGGAACATGCTGGAGGAGGTTGACTTCAGCCGTCTGTCC
AAGCTGAACCTCGAGGCCCCCGAGGGTGAGGACGTCGACTCGTATGGTTT
CCTCTACCACTACGACCGGTCCTACGACAAGGCGCCCGTCAAGAACGCCG
AGCGCCGTCTCCAGTCCCTCGACCGTGCCGCCTACAACGTCACCACCACC
CAGGACCCCGTCATCCAGGAACTGGCCGAGAAGAACGAGGCCACCATCTT
CGCCACCTCGGACATCCTGTCCATGCTCATGTGCGCCCCCCGCAGTGTCT
ACTCCTGGGATATCGTCATCGTCCACCAGGGCAACAAGATCTACTTCGAC
AAGCGCGAAGGCGCCTCCCTGGACCTGGTCACCGTTAACGAGAACGCCGC
CGACGCTCCCCTCGAGCTGGCCGACTCCGCCAACAAGCAGGATGCCATCA
ACACCCCCAGCGCCCTGGCCATGGAAGCAACCTTCATCAACCACAACTTC
GCCCTGCAGACCGTTGTCGAGTCCGAGGACAGCAAGGTCTCCCTGGCCCA
CCCTAACCCCTTCTACAACGCCGCCGAGGAGACCGAGCCCCTCGCCTCCA
AGGCCTACAAGTACCGTCGCTTCGATCTCTCCCTGGAGCGCGACGACGAG
CCCGTCAACATGATCGTTCGTACCGAAGTCGACGCCATCATGAAGAACCC
CGTCAACGGCGAGGACCAGCAGCTGCTCGTCAAGGCCCTCAACGAGTTCG
ACAGCAAGGCCCAGGGCTCCGGCGGTGCCCTCGACTGGCGCAGCAAGCTC
TGGTCCCAGCGCGGTGCCGTTGTTGCTACTGAGATGAAGAACAACAGCGT
CAAGCTCGCCCGCTGGACCACCCAGGCCATCCTCGCCAAGGCTGACGGCA
TGAAGCTGGGTTTCGTCTCTCGTGCTAACCCCCGCTCGGCCGCTGGTCAC
GTCGTCCTCGGTGTTGTCGGCTACAAGCCCCGTGATCTGGCTGCCCAGAT
GAACCTGAACCTCGGCAACGGTTGGGGTATCGTGCGTACTATCGTCGACC
GCATCCGTGCCCTCGATGCCGATGAGGATGAGGACAAGGTCACCAAGTAC
GTCCTTATCAAGGACCCCAACCGTCCTGTGCTGCGTCTGTACAGCGTCCC
TGCTACTACCTTTGAGGAGGAAGAGGAGGTCGCTGCTGAGGAGCAGGAGG
CTGCTGAGGAGGAGGCTGAGGAGTAAAGAGAAGCTATTTTTCTTCTATCT
TCTATCTCATGTGCATATTGATTGTCCTTGCTTTTTAAAAGTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:959529..961423-

>CAN33_31235-T1 ID=CAN33_31235-T1|Name=CAN33_31235-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5031bp|location=Sequence derived from alignment at NKJJ01000003.1:959529..961423- (Aspergillus niger FDAARGOS_311)
TTAGACCAGCAAGTCTACGGTGCCGGTTCCTCCAGCCTCTTCGCCGTCCA
GGTCGCCGAAGACGAATCTTCCTTCTCCGTTGTCGACAACACCCGCAGCT
CCGCTAAGCGTACCTTCGGCCGTGGCGGTGGTACCGTCTTCCGTGGCCGC
GCCCAGCGCGGTGGTGCCCAGCGCGGTGGTCGTGCCGGCTTCCAGCGCGT
GGGCGCTGGCCGTGGCCAGGGTGGTGACCGCTACTACGACAACCGTTCTG
GTGGCCGCGGCAACCGTGGCCGTCGCTTCGGCTGGAAGGACTACGACAAG
CCCCAGCGCACCCGTGAGCCTTCGGTCAACGTCCGCCCCGACTGGAACAT
GCTGGAGGAGGTTGACTTCAGCCGTCTGTCCAAGCTGAACCTCGAGGCCC
CCGAGGGTGAGGACGTCGACTCGTATGGTTTCCTCTACCACTACGACCGG
TCCTACGACAAGGCGCCCGTCAAGAACGCCGAGCGCCGTCTCCAGTCCCT
CGACCGTGCCGCCTACAACGTCACCACCACCCAGGACCCCGTCATCCAGG
AACTGGCCGAGAAGAACGAGGCCACCATCTTCGCCACCTCGGACATCCTG
TCCATGCTCATGTGCGCCCCCCGCAGTGTCTACTCCTGGGATATCGTCAT
CGTCCACCAGGGCAACAAGATCTACTTCGACAAGCGCGAAGGCGCCTCCC
TGGACCTGGTCACCGTTAACGAGAACGCCGCCGACGCTCCCCTCGAGCTG
GCCGACTCCGCCAACAAGCAGGATGCCATCAACACCCCCAGCGCCCTGGC
CATGGAAGCAACCTTCATCAACCACAACTTCGCCCTGCAGACCGTTGTCG
AGTCCGAGGACAGCAAGGTCTCCCTGGCCCACCCTAACCCCTTCTACAAC
GCCGCCGAGGAGACCGAGCCCCTCGCCTCCAAGGCCTACAAGTACCGTCG
CTTCGATCTCTCCCTGGAGCGCGACGACGAGCCCGTCAACATGATCGTTC
GTACCGAAGTCGACGCCATCATGAAGAACCCCGTCAACGGCGAGGACCAG
CAGCTGCTCGTCAAGGCCCTCAACGAGTTCGACAGCAAGGCCCAGGGCTC
CGGCGGTGCCCTCGACTGGCGCAGCAAGCTCTGGTCCCAGCGCGGTGCCG
TTGTTGCTACTGAGATGAAGAACAACAGCGTCAAGCTCGCCCGCTGGACC
ACCCAGGCCATCCTCGCCAAGGCTGACGGCATGAAGCTGGGTTTCGTCTC
TCGTGCTAACCCCCGCTCGGCCGCTGGTCACGTCGTCCTCGGTGTTGTCG
GCTACAAGCCCCGTGATCTGGCTGCCCAGATGAACCTGAACCTCGGCAAC
GGTTGGGGTATCGTGCGTACTATCGTCGACCGCATCCGTGCCCTCGATGC
CGATGAGGATGAGGACAAGGTCACCAAGTACGTCCTTATCAAGGACCCCA
ACCGTCCTGTGCTGCGTCTATGGCTCCCATCTCTATCGCAGACATCGTCG
CCGCTCTGCCGGCCGAAGACACCTGGGGCCCCGCTACCGCCAGCGACAAC
ATGCTGCAGGGCGTCCCCTACGCTCCCTTCTCCAAGGGTGACAAGCTGGG
TCGTATGGCTGACTGGACTGCCGAGTCCAAGGACCCTAACCGTGCCGGTC
GCCAGGCCTACAACCGCAACTACAGAGTTAGACCAGCAAGTCTACGGTGC
CGGTTCCTCCAGCCTCTTCGCCGTCCAGGTCGCCGAAGACGAATCTTCCT
TCTCCGTTGTCGACAACACCCGCAGCTCCGCTAAGCGTACCTTCGGCCGT
GGCGGTGGTACCGTCTTCCGTGGCCGCGCCCAGCGCGGTGGTGCCCAGCG
CGGTGGTCGTGCCGGCTTCCAGCGCGTGGGCGCTGGCCGTGGCCAGGGTG
GTGACCGCTACTACGACAACCGTTCTGGTGGCCGCGGCAACCGTGGCCGT
CGCTTCGGCTGGAAGGACTACGACAAGCCCCAGCGCACCCGTGAGCCTTC
GGTCAACGTCCGCCCCGACTGGAACATGCTGGAGGAGGTTGACTTCAGCC
GTCTGTCCAAGCTGAACCTCGAGGCCCCCGAGGGTGAGGACGTCGACTCG
TATGGTTTCCTCTACCACTACGACCGGTCCTACGACAAGGCGCCCGTCAA
GAACGCCGAGCGCCGTCTCCAGTCCCTCGACCGTGCCGCCTACAACGTCA
CCACCACCCAGGACCCCGTCATCCAGGAACTGGCCGAGAAGAACGAGGCC
ACCATCTTCGCCACCTCGGACATCCTGTCCATGCTCATGTGCGCCCCCCG
CAGTGTCTACTCCTGGGATATCGTCATCGTCCACCAGGGCAACAAGATCT
ACTTCGACAAGCGCGAAGGCGCCTCCCTGGACCTGGTCACCGTTAACGAG
AACGCCGCCGACGCTCCCCTCGAGCTGGCCGACTCCGCCAACAAGCAGGA
TGCCATCAACACCCCCAGCGCCCTGGCCATGGAAGCAACCTTCATCAACC
ACAACTTCGCCCTGCAGACCGTTGTCGAGTCCGAGGACAGCAAGGTCTCC
CTGGCCCACCCTAACCCCTTCTACAACGCCGCCGAGGAGACCGAGCCCCT
CGCCTCCAAGGCCTACAAGTACCGTCGCTTCGATCTCTCCCTGGAGCGCG
ACGACGAGCCCGTCAACATGATCGTTCGTACCGAAGTCGACGCCATCATG
AAGAACCCCGTCAACGGCGAGGACCAGCAGCTGCTCGTCAAGGCCCTCAA
CGAGTTCGACAGCAAGGCCCAGGGCTCCGGCGGTGCCCTCGACTGGCGCA
GCAAGCTCTGGTCCCAGCGCGGTGCCGTTGTTGCTACTGAGATGAAGAAC
AACAGCGTCAAGCTCGCCCGCTGGACCACCCAGGCCATCCTCGCCAAGGC
TGACGGCATGAAGCTGGGTTTCGTCTCTCGTGCTAACCCCCGCTCGGCCG
CTGGTCACGTCGTCCTCGGTGTTGTCGGCTACAAGCCCCGTGATCTGGCT
GCCCAGATGAACCTGAACCTCGGCAACGGTTGGGGTATCGTGCGTACTAT
CGTCGACCGCATCCGTGCCCTCGATGCCGATGAGGATGAGGACAAGGTCA
CCAAGTACGTCCTTATCAAGGACCCCAACCGTCCTGTGCTGCGTCTATGG
CTCCCATCTCTATCGCAGACATCGTCGCCGCTCTGCCGGCCGAAGACACC
TGGGGCCCCGCTACCGCCAGCGACAACATGCTGCAGGGCGTCCCCTACGC
TCCCTTCTCCAAGGGTGACAAGCTGGGTCGTATGGCTGACTGGACTGCCG
AGTCCAAGGACCCTAACCGTGCCGGTCGCCAGGCCTACAACCGCAACTAC
AGAGTTAGACCAGCAAGTCTACGGTGCCGGTTCCTCCAGCCTCTTCGCCG
TCCAGGTCGCCGAAGACGAATCTTCCTTCTCCGTTGTCGACAACACCCGC
AGCTCCGCTAAGCGTACCTTCGGCCGTGGCGGTGGTACCGTCTTCCGTGG
CCGCGCCCAGCGCGGTGGTGCCCAGCGCGGTGGTCGTGCCGGCTTCCAGC
GCGTGGGCGCTGGCCGTGGCCAGGGTGGTGACCGCTACTACGACAACCGT
TCTGGTGGCCGCGGCAACCGTGGCCGTCGCTTCGGCTGGAAGGACTACGA
CAAGCCCCAGCGCACCCGTGAGCCTTCGGTCAACGTCCGCCCCGACTGGA
ACATGCTGGAGGAGGTTGACTTCAGCCGTCTGTCCAAGCTGAACCTCGAG
GCCCCCGAGGGTGAGGACGTCGACTCGTATGGTTTCCTCTACCACTACGA
CCGGTCCTACGACAAGGCGCCCGTCAAGAACGCCGAGCGCCGTCTCCAGT
CCCTCGACCGTGCCGCCTACAACGTCACCACCACCCAGGACCCCGTCATC
CAGGAACTGGCCGAGAAGAACGAGGCCACCATCTTCGCCACCTCGGACAT
CCTGTCCATGCTCATGTGCGCCCCCCGCAGTGTCTACTCCTGGGATATCG
TCATCGTCCACCAGGGCAACAAGATCTACTTCGACAAGCGCGAAGGCGCC
TCCCTGGACCTGGTCACCGTTAACGAGAACGCCGCCGACGCTCCCCTCGA
GCTGGCCGACTCCGCCAACAAGCAGGATGCCATCAACACCCCCAGCGCCC
TGGCCATGGAAGCAACCTTCATCAACCACAACTTCGCCCTGCAGACCGTT
GTCGAGTCCGAGGACAGCAAGGTCTCCCTGGCCCACCCTAACCCCTTCTA
CAACGCCGCCGAGGAGACCGAGCCCCTCGCCTCCAAGGCCTACAAGTACC
GTCGCTTCGATCTCTCCCTGGAGCGCGACGACGAGCCCGTCAACATGATC
GTTCGTACCGAAGTCGACGCCATCATGAAGAACCCCGTCAACGGCGAGGA
CCAGCAGCTGCTCGTCAAGGCCCTCAACGAGTTCGACAGCAAGGCCCAGG
GCTCCGGCGGTGCCCTCGACTGGCGCAGCAAGCTCTGGTCCCAGCGCGGT
GCCGTTGTTGCTACTGAGATGAAGAACAACAGCGTCAAGCTCGCCCGCTG
GACCACCCAGGCCATCCTCGCCAAGGCTGACGGCATGAAGCTGGGTTTCG
TCTCTCGTGCTAACCCCCGCTCGGCCGCTGGTCACGTCGTCCTCGGTGTT
GTCGGCTACAAGCCCCGTGATCTGGCTGCCCAGATGAACCTGAACCTCGG
CAACGGTTGGGGTATCGTGCGTACTATCGTCGACCGCATCCGTGCCCTCG
ATGCCGATGAGGATGAGGACAAGGTCACCAAGTACGTCCTTATCAAGGAC
CCCAACCGTCCTGTGCTGCGTCTATGGCTCCCATCTCTATCGCAGACATC
GTCGCCGCTCTGCCGGCCGAAGACACCTGGGGCCCCGCTACCGCCAGCGA
CAACATGCTGCAGGGCGTCCCCTACGCTCCCTTCTCCAAGGGTGACAAGC
TGGGTCGTATGGCTGACTGGACTGCCGAGTCCAAGGACCCTAACCGTGCC
GGTCGCCAGGCCTACAACCGCAACTACAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_31235CAN33_31235Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31235-T1CAN33_31235-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31235-T1.cdsCAN33_31235-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31235-T1.exon3CAN33_31235-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_31235-T1.exon2CAN33_31235-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_31235-T1.exon1CAN33_31235-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR007783
DBxrefPFAM:PF05091
ProductEukaryotic translation initiation factor 3 subunit 7 (eIF-3) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:959529..961423 -
Powered by Drupal