You are here

Home

CAN33_31560-T1, CAN33_31560-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_31560-T1
Unique NameCAN33_31560-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1150914..1152211+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_31560-T1 ID=CAN33_31560-T1|Name=CAN33_31560-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1298bp|location=Sequence derived from alignment at NKJJ01000003.1:1150914..1152211+ (Aspergillus niger FDAARGOS_311)
ATGGGCGAAGCACCTCCCGTCAAAGAGCATCTGCTCATCGCCTACGGCCG
CGATCTTCCGCAATGGCTGATCGACGAGACGCAGGCCAAATTCCCCGAAG
CCGAACTTTCCATCCTGCAGCTGCCCAATTTCGCGCCAATTCCAGCTGGT
CAGTGCTGGCTTCTCGAATCCCTGCTCGCTCTGTGGCCATCATTAATTAA
TCAAATTCACCAGAAATCGCGCGCAAGACCACTCTCCTCGTCACCTTCAG
CAACCTCCCCGCGCCGGAAGATGCATCCAAGTAATTCCTCCCCCTGTCAC
CTCAAATTTCAGCTACAGAAATAGAACACAGTTAATATAAATTCATTTAA
ATCAATCTAGAATCAAAATCATCCACTCCCTCTCCTCCGGCCTCGACCAC
CTCCTCTCCCACCCCATCGTCAAAGAAACCTCCATCCCTCTCACCTCCAG
CTCGGGCATCCACGGGCCCCCAATCGCCGAATGGACCATCATGAACTGGC
TCGTCGCCTCGCGACGCTTCGTCTACACCCACGAAAACCAACAAAAACAC
AACTGGGCGAAAAACGTCGACTTCATGAACACCGTCCATGACCAAGTCGG
CAGGAAAGTCGGAATTCTCGGATACGGAAGTATCGGACGACAAAGTATTT
CCTTCTCCCCTTACAAATTCCCCTGTATCCTGGTCTCCAAGAAAAAGCAC
TAACTATGGAAAAGTTGGCCGCGTCGCCTCCGCTCTAGGCATGCAAGTGC
ATGCCTACACAGCCTCGCCGCGCCCGACCCCGTCCTCCAAGAAAGACAAC
GGCTACATCGTCCCCGGCACCGGCGACCGCGACGGCACCATCCCTGTATC
CTGGCACCATGGGACTGACAAGGCCTCTATCCACGAATTCCTATCCCTGG
GTCTAGATCACCTTGTGATTGCGTTGCCGCTGACACCGCAGACAACCCGT
ATGCTTGGGACTGAGGAATTCGAGATCCTGAGTCGTGGTGTGTCTGCAGA
ACGGCCACGTCCGTACCTTACGAATATCTCTCGGGGGAAGGTCCTCAATC
AGGATGCATTGATTGAGGCGCTGAAAGGAGGAGTGCTGGGCGGAGCGGCG
CTGGATGTGGCGGATCCGGAACCGTTGCCGGAGGATAGCCCGTTGTGGGA
GGTGCCGAATGTGCAGATCAGTCCGCATGTCAGTTCGGCGGGGAGGGAAT
ATATTCCGCGGTCGTTGGATATTATGAGGGAGAATGTGGGGAGGTTGGAG
AGGGGGGAGGAATTGTTGAATGGGTTTAAGAGAGGGAAGGGGTATTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:1150914..1152211+

>CAN33_31560-T1 ID=CAN33_31560-T1|Name=CAN33_31560-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4332bp|location=Sequence derived from alignment at NKJJ01000003.1:1150914..1152211+ (Aspergillus niger FDAARGOS_311)
ATGGGCGAAGCACCTCCCGTCAAAGAGCATCTGCTCATCGCCTACGGCCG
CGATCTTCCGCAATGGCTGATCGACGAGACGCAGGCCAAATTCCCCGAAG
CCGAACTTTCCATCCTGCAGCTGCCCAATTTCGCGCCAATTCCAGCTGAA
ATCGCGCGCAAGACCACTCTCCTCGTCACCTTCAGCAACCTCCCCGCGCC
GGAAGATGCATCCAAAATCAAAATCATCCACTCCCTCTCCTCCGGCCTCG
ACCACCTCCTCTCCCACCCCATCGTCAAAGAAACCTCCATCCCTCTCACC
TCCAGCTCGGGCATCCACGGGCCCCCAATCGCCGAATGGACCATCATGAA
CTGGCTCGTCGCCTCGCGACGCTTCGTCTACACCCACGAAAACCAACAAA
AACACAACTGGGCGAAAAACGTCGACTTCATGAACACCGTCCATGACCAA
GTCGGCAGGAAAGTCGGAATTCTCGGATACGGAAGTATCGGACGACAAAT
TGGCCGCGTCGCCTCCGCTCTAGGCATGCAAGTGCATGCCTACACAGCCT
CGCCGCGCCCGACCCCGTCCTCCAAGAAAGACAACGGCTACATCGTCCCC
GGCACCGGCGACCGCGACGGCACCATCCCTGTATCCTGGCACCATGGGAC
TGACAAGGCCTCTATCCACGAATTCCTATCCCTGGGTCTAGATCACCTTG
TGATTGCGTTGCCGCTGACACCGCAGACAACCCGTATGCTTGGGACTGAG
GAATTCGAGATCCTGAGTCGTGGTGTGTCTGCAGAACGGCCACGTCCGTA
CCTTACGAATATCTCTCGGGGGAAGGTCCTCAATCAGGATGCATTGATTG
AGGCGCTGAAAGGAGGAGTGCTGGGCGGAGCGGCGCTGGATGTGGCGGAT
CCGGAACCGTTGCCGGAGGATAGCCCGTTGTGGGAGGTGCCGAATGTGCA
GATCAGTCCGCATGTCAGTTCGGCGGGGAGGGAATATATTCCGCGGTCGT
TGGATATTATGAGGGAGAATGTGGGGAGGTTGGAGAGGGGGGAGGAATTG
TTGAATGGGTTTAAGAGAGGGAAGGGGTATTGAATGGGCGAAGCACCTCC
CGTCAAAGAGCATCTGCTCATCGCCTACGGCCGCGATCTTCCGCAATGGC
TGATCGACGAGACGCAGGCCAAATTCCCCGAAGCCGAACTTTCCATCCTG
CAGCTGCCCAATTTCGCGCCAATTCCAGCTGAAATCGCGCGCAAGACCAC
TCTCCTCGTCACCTTCAGCAACCTCCCCGCGCCGGAAGATGCATCCAAAA
TCAAAATCATCCACTCCCTCTCCTCCGGCCTCGACCACCTCCTCTCCCAC
CCCATCGTCAAAGAAACCTCCATCCCTCTCACCTCCAGCTCGGGCATCCA
CGGGCCCCCAATCGCCGAATGGACCATCATGAACTGGCTCGTCGCCTCGC
GACGCTTCGTCTACACCCACGAAAACCAACAAAAACACAACTGGGCGAAA
AACGTCGACTTCATGAACACCGTCCATGACCAAGTCGGCAGGAAAGTCGG
AATTCTCGGATACGGAAGTATCGGACGACAAATTGGCCGCGTCGCCTCCG
CTCTAGGCATGCAAGTGCATGCCTACACAGCCTCGCCGCGCCCGACCCCG
TCCTCCAAGAAAGACAACGGCTACATCGTCCCCGGCACCGGCGACCGCGA
CGGCACCATCCCTGTATCCTGGCACCATGGGACTGACAAGGCCTCTATCC
ACGAATTCCTATCCCTGGGTCTAGATCACCTTGTGATTGCGTTGCCGCTG
ACACCGCAGACAACCCGTATGCTTGGGACTGAGGAATTCGAGATCCTGAG
TCGTGGTGTGTCTGCAGAACGGCCACGTCCGTACCTTACGAATATCTCTC
GGGGGAAGGTCCTCAATCAGGATGCATTGATTGAGGCGCTGAAAGGAGGA
GTGCTGGGCGGAGCGGCGCTGGATGTGGCGGATCCGGAACCGTTGCCGGA
GGATAGCCCGTTGTGGGAGGTGCCGAATGTGCAGATCAGTCCGCATGTCA
GTTCGGCGGGGAGGGAATATATTCCGCGGTCGTTGGATATTATGAGGGAG
AATGTGGGGAGGTTGGAGAGGGGGGAGGAATTGTTGAATGGGTTTAAGAG
AGGGAAGGGGTATTGAATGGGCGAAGCACCTCCCGTCAAAGAGCATCTGC
TCATCGCCTACGGCCGCGATCTTCCGCAATGGCTGATCGACGAGACGCAG
GCCAAATTCCCCGAAGCCGAACTTTCCATCCTGCAGCTGCCCAATTTCGC
GCCAATTCCAGCTGAAATCGCGCGCAAGACCACTCTCCTCGTCACCTTCA
GCAACCTCCCCGCGCCGGAAGATGCATCCAAAATCAAAATCATCCACTCC
CTCTCCTCCGGCCTCGACCACCTCCTCTCCCACCCCATCGTCAAAGAAAC
CTCCATCCCTCTCACCTCCAGCTCGGGCATCCACGGGCCCCCAATCGCCG
AATGGACCATCATGAACTGGCTCGTCGCCTCGCGACGCTTCGTCTACACC
CACGAAAACCAACAAAAACACAACTGGGCGAAAAACGTCGACTTCATGAA
CACCGTCCATGACCAAGTCGGCAGGAAAGTCGGAATTCTCGGATACGGAA
GTATCGGACGACAAATTGGCCGCGTCGCCTCCGCTCTAGGCATGCAAGTG
CATGCCTACACAGCCTCGCCGCGCCCGACCCCGTCCTCCAAGAAAGACAA
CGGCTACATCGTCCCCGGCACCGGCGACCGCGACGGCACCATCCCTGTAT
CCTGGCACCATGGGACTGACAAGGCCTCTATCCACGAATTCCTATCCCTG
GGTCTAGATCACCTTGTGATTGCGTTGCCGCTGACACCGCAGACAACCCG
TATGCTTGGGACTGAGGAATTCGAGATCCTGAGTCGTGGTGTGTCTGCAG
AACGGCCACGTCCGTACCTTACGAATATCTCTCGGGGGAAGGTCCTCAAT
CAGGATGCATTGATTGAGGCGCTGAAAGGAGGAGTGCTGGGCGGAGCGGC
GCTGGATGTGGCGGATCCGGAACCGTTGCCGGAGGATAGCCCGTTGTGGG
AGGTGCCGAATGTGCAGATCAGTCCGCATGTCAGTTCGGCGGGGAGGGAA
TATATTCCGCGGTCGTTGGATATTATGAGGGAGAATGTGGGGAGGTTGGA
GAGGGGGGAGGAATTGTTGAATGGGTTTAAGAGAGGGAAGGGGTATTGAA
TGGGCGAAGCACCTCCCGTCAAAGAGCATCTGCTCATCGCCTACGGCCGC
GATCTTCCGCAATGGCTGATCGACGAGACGCAGGCCAAATTCCCCGAAGC
CGAACTTTCCATCCTGCAGCTGCCCAATTTCGCGCCAATTCCAGCTGAAA
TCGCGCGCAAGACCACTCTCCTCGTCACCTTCAGCAACCTCCCCGCGCCG
GAAGATGCATCCAAAATCAAAATCATCCACTCCCTCTCCTCCGGCCTCGA
CCACCTCCTCTCCCACCCCATCGTCAAAGAAACCTCCATCCCTCTCACCT
CCAGCTCGGGCATCCACGGGCCCCCAATCGCCGAATGGACCATCATGAAC
TGGCTCGTCGCCTCGCGACGCTTCGTCTACACCCACGAAAACCAACAAAA
ACACAACTGGGCGAAAAACGTCGACTTCATGAACACCGTCCATGACCAAG
TCGGCAGGAAAGTCGGAATTCTCGGATACGGAAGTATCGGACGACAAATT
GGCCGCGTCGCCTCCGCTCTAGGCATGCAAGTGCATGCCTACACAGCCTC
GCCGCGCCCGACCCCGTCCTCCAAGAAAGACAACGGCTACATCGTCCCCG
GCACCGGCGACCGCGACGGCACCATCCCTGTATCCTGGCACCATGGGACT
GACAAGGCCTCTATCCACGAATTCCTATCCCTGGGTCTAGATCACCTTGT
GATTGCGTTGCCGCTGACACCGCAGACAACCCGTATGCTTGGGACTGAGG
AATTCGAGATCCTGAGTCGTGGTGTGTCTGCAGAACGGCCACGTCCGTAC
CTTACGAATATCTCTCGGGGGAAGGTCCTCAATCAGGATGCATTGATTGA
GGCGCTGAAAGGAGGAGTGCTGGGCGGAGCGGCGCTGGATGTGGCGGATC
CGGAACCGTTGCCGGAGGATAGCCCGTTGTGGGAGGTGCCGAATGTGCAG
ATCAGTCCGCATGTCAGTTCGGCGGGGAGGGAATATATTCCGCGGTCGTT
GGATATTATGAGGGAGAATGTGGGGAGGTTGGAGAGGGGGGAGGAATTGT
TGAATGGGTTTAAGAGAGGGAAGGGGTATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_31560CAN33_31560Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31560-T1.exon1CAN33_31560-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_31560-T1.exon2CAN33_31560-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_31560-T1.exon3CAN33_31560-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_31560-T1.exon4CAN33_31560-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31560-T1.cdsCAN33_31560-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31560-T1CAN33_31560-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR029752
DBxrefInterPro:IPR006140
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1150914..1152211 +
Powered by Drupal