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CAN33_3165-T1, CAN33_3165-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3165-T1
Unique NameCAN33_3165-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2004230..2005209+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3165-T1 ID=CAN33_3165-T1|Name=CAN33_3165-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=980bp|location=Sequence derived from alignment at NKJJ01000004.1:2004230..2005209+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCTGAACACCCTATTGAGAAGGATATGGCTCCTGAGAACGGCAG
CAATGGCAGTGCTCCCTTGACCCACGAGTTGACCGCTGAGGAAACCGCCA
GAGCTGCTGCGCGTTTCGGCTACGGACCCATGGCTCACGTCAACACCAAG
GAGGCCAACCTGCGCCCCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAA
GTCGGTCGAGCAGCGCAAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCG
CTTTCGCCCTCACCACTTTCCTCCTGAGTTTGATCAACATGGGAACCCGT
GGTATCTCTGCGAACAACATTGTCGTTGGTCTGGCTTTCGGATATGGTGG
TCTCGTTCAGTTGCTTGCTGGCATGTGGTAGGTACACCCCGTTACCACAA
CTCCCAAGATGAATTATGCTGATCGTTATTGATAGGGAAATGGCTGTCGG
AAACACCTTCGGTGCCACTGCTCTGTCCTCCTACGGAGGTTTCTGGATCT
CTTTCGCCATTGTCTTGACCCCCGGTGGGTTCGAGATCGAGTCGTCGATT
GAATCCGCCGGTGGCGCCACCATGTTCTACAACTCAATGGGACTGTACCT
GCTGGTAAGTTTTGAGCAATGGCTGGGAGAGTGAGCATCGCGCTAACTGT
CCTCCTTAGGGCTGGTTCATCTTCACCACTATCCTGCTGTTCTGCACCTT
GAGGTCCACTGTCGCCTTCTTCTGCCTCTTCCTGTTCCTGGACCTGACCT
TCTTGCTGCTTGGTGTTGGTTACCTGCAGCGGAACTCTGCTGGCGAGCCC
AACACTCCCGTCATCAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTGCATT
CGCCGCTTGGTACAACGCCCTGGCTGGTATTGCCGACAGCAGCAACAGCT
TCTTCATCATCCCTGTTGCTCACTTCCCCTGGTCTCCCACTGCCCGTAGC
CGTGCTAAGACCCCTCGTGAGACCGTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2004230..2005209+

>CAN33_3165-T1 ID=CAN33_3165-T1|Name=CAN33_3165-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2601bp|location=Sequence derived from alignment at NKJJ01000004.1:2004230..2005209+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCTGAACACCCTATTGAGAAGGATATGGCTCCTGAGAACGGCAG
CAATGGCAGTGCTCCCTTGACCCACGAGTTGACCGCTGAGGAAACCGCCA
GAGCTGCTGCGCGTTTCGGCTACGGACCCATGGCTCACGTCAACACCAAG
GAGGCCAACCTGCGCCCCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAA
GTCGGTCGAGCAGCGCAAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCG
CTTTCGCCCTCACCACTTTCCTCCTGAGTTTGATCAACATGGGAACCCGT
GGTATCTCTGCGAACAACATTGTCGTTGGTCTGGCTTTCGGATATGGTGG
TCTCGTTCAGTTGCTTGCTGGCATGTGGGAAATGGCTGTCGGAAACACCT
TCGGTGCCACTGCTCTGTCCTCCTACGGAGGTTTCTGGATCTCTTTCGCC
ATTGTCTTGACCCCCGGTGGGTTCGAGATCGAGTCGTCGATTGAATCCGC
CGGTGGCGCCACCATGTTCTACAACTCAATGGGACTGTACCTGCTGGGCT
GGTTCATCTTCACCACTATCCTGCTGTTCTGCACCTTGAGGTCCACTGTC
GCCTTCTTCTGCCTCTTCCTGTTCCTGGACCTGACCTTCTTGCTGCTTGG
TGTTGGTTACCTGCAGCGGAACTCTGCTGGCGAGCCCAACACTCCCGTCA
TCAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTGCATTCGCCGCTTGGTAC
AACGCCCTGGCTGGTATTGCCGACAGCAGCAACAGCTTCTTCATCATCCC
TGTTGCTCACTTCCCCTGGTCTCCCACTGCCCGTAGCCGTGCTAAGACCC
CTCGTGAGACCGTCTAAATGTCTGCTGAACACCCTATTGAGAAGGATATG
GCTCCTGAGAACGGCAGCAATGGCAGTGCTCCCTTGACCCACGAGTTGAC
CGCTGAGGAAACCGCCAGAGCTGCTGCGCGTTTCGGCTACGGACCCATGG
CTCACGTCAACACCAAGGAGGCCAACCTGCGCCCCTTCGGAGGTGAATTC
CAGCCTGGTCTGTACAAGTCGGTCGAGCAGCGCAAGTTCGCCAACCCGGC
GCCTCTGGGTCTCTGCGCTTTCGCCCTCACCACTTTCCTCCTGAGTTTGA
TCAACATGGGAACCCGTGGTATCTCTGCGAACAACATTGTCGTTGGTCTG
GCTTTCGGATATGGTGGTCTCGTTCAGTTGCTTGCTGGCATGTGGGAAAT
GGCTGTCGGAAACACCTTCGGTGCCACTGCTCTGTCCTCCTACGGAGGTT
TCTGGATCTCTTTCGCCATTGTCTTGACCCCCGGTGGGTTCGAGATCGAG
TCGTCGATTGAATCCGCCGGTGGCGCCACCATGTTCTACAACTCAATGGG
ACTGTACCTGCTGGGCTGGTTCATCTTCACCACTATCCTGCTGTTCTGCA
CCTTGAGGTCCACTGTCGCCTTCTTCTGCCTCTTCCTGTTCCTGGACCTG
ACCTTCTTGCTGCTTGGTGTTGGTTACCTGCAGCGGAACTCTGCTGGCGA
GCCCAACACTCCCGTCATCAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTG
CATTCGCCGCTTGGTACAACGCCCTGGCTGGTATTGCCGACAGCAGCAAC
AGCTTCTTCATCATCCCTGTTGCTCACTTCCCCTGGTCTCCCACTGCCCG
TAGCCGTGCTAAGACCCCTCGTGAGACCGTCTAAATGTCTGCTGAACACC
CTATTGAGAAGGATATGGCTCCTGAGAACGGCAGCAATGGCAGTGCTCCC
TTGACCCACGAGTTGACCGCTGAGGAAACCGCCAGAGCTGCTGCGCGTTT
CGGCTACGGACCCATGGCTCACGTCAACACCAAGGAGGCCAACCTGCGCC
CCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAAGTCGGTCGAGCAGCGC
AAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCGCTTTCGCCCTCACCAC
TTTCCTCCTGAGTTTGATCAACATGGGAACCCGTGGTATCTCTGCGAACA
ACATTGTCGTTGGTCTGGCTTTCGGATATGGTGGTCTCGTTCAGTTGCTT
GCTGGCATGTGGGAAATGGCTGTCGGAAACACCTTCGGTGCCACTGCTCT
GTCCTCCTACGGAGGTTTCTGGATCTCTTTCGCCATTGTCTTGACCCCCG
GTGGGTTCGAGATCGAGTCGTCGATTGAATCCGCCGGTGGCGCCACCATG
TTCTACAACTCAATGGGACTGTACCTGCTGGGCTGGTTCATCTTCACCAC
TATCCTGCTGTTCTGCACCTTGAGGTCCACTGTCGCCTTCTTCTGCCTCT
TCCTGTTCCTGGACCTGACCTTCTTGCTGCTTGGTGTTGGTTACCTGCAG
CGGAACTCTGCTGGCGAGCCCAACACTCCCGTCATCAAGGCGGGTGGTTT
CTTCGGTCTCCTGGCTGCATTCGCCGCTTGGTACAACGCCCTGGCTGGTA
TTGCCGACAGCAGCAACAGCTTCTTCATCATCCCTGTTGCTCACTTCCCC
TGGTCTCCCACTGCCCGTAGCCGTGCTAAGACCCCTCGTGAGACCGTCTA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3165CAN33_3165Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3165-T1.exon1CAN33_3165-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_3165-T1.exon2CAN33_3165-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3165-T1.exon3CAN33_3165-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3165-T1.cdsCAN33_3165-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3165-T1CAN33_3165-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000791
DBxrefPFAM:PF01184
ProductGPR1/FUN34/yaaH family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2004230..2005209 +
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