CAN33_3200-T1, CAN33_3200-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_3200-T1
Unique Name	CAN33_3200-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2038924..2040242-
coding sequence from alignment at NKJJ01000004.1:2038924..2040242-

mRNA from alignment at NKJJ01000004.1:2038924..2040242-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_3200-T1 ID=CAN33_3200-T1|Name=CAN33_3200-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1319bp|location=Sequence derived from alignment at NKJJ01000004.1:2038924..2040242- (Aspergillus niger FDAARGOS_311)
ATGCATCGCACCTATTCTATGCGCCAGTCGCGCCTGCCGACGGCCTCGCA
GATTGAGAATCCTCCTCCGCCATTGTCTTCCACCAAGACAAACAGAATCT
TTGGAAAGGGCGGTTTTGGTGAGTCGTCTCCTGGAATGGTCGGGTCTTTG
TTCTGGATGGAGGCCAATGGCTCTGGTCACTCCCCTATGCTAGGGGTCTG
GACAACTGCTATTTGCTGAGAATAGGCTGGGCCTTGTATGGTGATTATAC
TGACATGTGTCAATCCAGGCCATGCCTTGCGCAAGAACACGGCTGGCGCC
TTCGGGCCTGACCTCGCCAGAAAACTCTCCCAATTGGTGAAGATGGAGAA
GAACGTCATGCGCAGCATGGAGATGGTCTCTAGGGAGCGTATGGAAACTG
CTGTATGTTCGCGTACTGGCCTCTACTTGTGAAGTACGACAACTAATTTA
TGGTGCTTGGCAGCAACAACTCTCCATCTGGGGTGAAAACTGCGACGAAG
ATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGGC
GAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCAT
CAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGTA
TGTGCTCTCTGTTCCAAGCTACGGAGTTTCAATACTAACGTGCATACGCT
TATAGGCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGG
ACCCCAACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCC
GAGGCCGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGA
GAAGCTCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATT
GCGAGAAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTG
GTTGATGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGG
CTATGACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCA
ACTGGGTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCG
CGCACCCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGT
CGATCTTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCG
CGGATCAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTG
GCCAGCACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCC
CGTCACGGTGTCTGTTTAA

Coding sequence (CDS) from alignment at NKJJ01000004.1:2038924..2040242-

>CAN33_3200-T1 ID=CAN33_3200-T1|Name=CAN33_3200-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4200bp|location=Sequence derived from alignment at NKJJ01000004.1:2038924..2040242- (Aspergillus niger FDAARGOS_311)
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PIL1	CAN33_3200	Aspergillus niger FDAARGOS_311	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_3200-T1	CAN33_3200-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_3200-T1.cds	CAN33_3200-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_3200-T1.exon4	CAN33_3200-T1.exon4	Aspergillus niger FDAARGOS_311	exon
CAN33_3200-T1.exon3	CAN33_3200-T1.exon3	Aspergillus niger FDAARGOS_311	exon
CAN33_3200-T1.exon2	CAN33_3200-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_3200-T1.exon1	CAN33_3200-T1.exon1	Aspergillus niger FDAARGOS_311	exon

Properties


Property Name	Value
Note	EggNog:ENOG41
DBxref	InterPro:IPR028245
DBxref	InterPro:IPR027267
DBxref	PFAM:PF13805
Product	Eisosome core component

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000004.1	supercontig	NKJJ01000004.1:2038924..2040242 -

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CAN33_3200-T1, CAN33_3200-T1 (mRNA) Aspergillus niger FDAARGOS_311