You are here

Home

CAN33_32170-T1, CAN33_32170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_32170-T1
Unique NameCAN33_32170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1514081..1516210-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_32170-T1 ID=CAN33_32170-T1|Name=CAN33_32170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2130bp|location=Sequence derived from alignment at NKJJ01000003.1:1514081..1516210- (Aspergillus niger FDAARGOS_311)
ATGGGAACTCCACTTGTTGGTACCGCTATTATCACCGGGGCGAATGGATT
GCTCGGGTCGGAGATAGCTGTCTCGATTGCCAAAGCACAGCCGTTTGTTC
ACTTGCTGCTGGTGGCCCGCGATATCAGATCCGACAGCGTCAAGGATGTG
ACGGACAGGATCCGTCTCATCGGACCCCGCTCCGTCGAGGTGGTTAAAGC
AGACCTTGCCTGCTTTAACTCCGTCGTGAGCTTTTCCCAATACACCGTCG
AGAGGGTACGAAGTAAAGAGATCCCTCCCGTGATCTTGTTGATCAACTCC
GCCGCAACTTCGTCATACGTTACCGATCAAGTCACACGAGATGGGTACGA
TCCCGTCTACCAGACCAACTGCATCGCGCCGTTCCTGTTGACTGTGAGCC
TGCTCGAGGCCTTCCGCGCAGGCGACGGTACACCGAACGGTGGTGCTCGA
GTAATCAATATCGGGTGCTCCTCCATGTCCAAGGGATCCCTGGACTATTT
TGACAGCGAAGACCCGGAGAGCGCTGCCCAGCCGCCAGGAACACCAATTG
GCGCCAAGGAAGCGACCAGTCGCTTCGGAAGTAGTAAGTTGTTAATGAGC
GCTGCTATGTATGCCTTGCGTCGAAGTCTGGTACTTGTGAGTTGTCCTCC
CCTACGGTCCCCTCTGTCCCAAAGTACCCCACTAACAAAAGCCGAATGGG
GGTAGACGGGCAACATCTCGCTCAATGTATACACAATGGATCCCGGCGGT
ATGACCGGAGAGAGCCACCTAACGACCGATGCCCCGTTATCGGTCCGAAT
GGCACACCAGACGCGGTCTGGACTCCGGCCATTCCTGCGGGTGTTTTCCA
AGAGTGCGATAAACAAGGCTAGCGTTCCAGCCAAGGTCATTGCAAGAGTC
GCATTTCAAAAGGAGACGGTGGAGAACTGGGGAAGGGAACGATATTATAT
CTTGGATAGCGAATACGAGGCTGCATCCGTCATTCCGGCCTTGCGGGATG
TGCCGCGCATGGATGGGCTGCTGCAGAAGGTTATGCGACAGATCGAGATA
GGCGTCAAAGGCATGGGATCGCCTCAATCAAGAGTATCGCGGCTGACTGC
TCGTTAGTGGGGGATTCTACAAGCATTTCTGACATCGTCTCTTTCTGTTC
TGTTCTGTGTCTTTTGCGCGGTACCATCCCAAAATTAGGAGCATTTCTGG
GGCGTTACTTTGAACTATCGGTTGAACCTGGGTTTGCAGATAAGGAGTTG
ATTTTTCTTTGGGTCATAAAAAGCCACTATTGCTGTATTTAGAAAATGAA
CTGTACAGGAGCGATGAGCCGCCAATCAAGATGGACAACCACCGCAGTTG
ATCAAAAGATAATGGAACCGAGAAAAACGTGGAGTAAGGGAGGAGAGAGA
CGAGCCAGAAGGAGGTTGCATGGCTGCAAACGGAGAAGGCCTGATGCCGG
ATTCGGTTCTGGACCCGGAAGGCGGGCTATGCTTGGCACCTCTTGCTCGA
CGCCGCCTTGAGCCTACGTTCGGTCGACGCAATCAATGCTACCGTCAGAC
CTCGTTGTTCAATTCTCACGCTCGTTCGGCCCCTTGAAGCCTTTTCGGTA
CCTTTTTATTAATCTCCTGGATCTGCGATCCGCTAACATTCTTCATCGTC
TGTGCCCGCGTCGGTGTTGTTTTCTACCCCCCGTAAGCGCATTCCAGGGA
TTCTTGAAGCTGGTGGTCATCGCTCCGGGATCTAGGAGCCCCGGAGGTTC
TTTGCTTCAGGACCTGTTTCCTAGCTACATGCAATTGTAGGAGAGATGAA
CCGGCATCACGCCTTCTCGAATGGCTATGCTGCCTACCCCCGCGGCAAAG
CCAGTCACAACAACACCTTTTCAATTTCCCCCCACCGGTAAGCGGCCCCT
GCAACTGTCGAAGATCATCGCATATCATCACCACCTTCACATGGATTAGA
CCTCGCTGGAGGCCAATCGGTGGCCTGACATATCAGTCATCAAACTAGCA
GTGCAAGAGGATCGTTTGGACTGACATTGGTTTGCTAGCTTTCAACCGCG
CCCACAACCGGCTTTGCGACGTCGAAGACAGCTCCTTCAACGACTCTGCC
TTATTGCCGCCATTTCAACGCTGCTGTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:1514081..1516210-

>CAN33_32170-T1 ID=CAN33_32170-T1|Name=CAN33_32170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3375bp|location=Sequence derived from alignment at NKJJ01000003.1:1514081..1516210- (Aspergillus niger FDAARGOS_311)
CTTTCAACCGCGCCCACAACCGGCTTTGCGACGTCGAAGACAGCTCCTTC
AACGACTCTGCCTTATTGCCGCCATTTCAACGCTGCTGTTGAACGGGCAA
CATCTCGCTCAATGTATACACAATGGATCCCGGCGGTATGACCGGAGAGA
GCCACCTAACGACCGATGCCCCGTTATCGGTCCGAATGGCACACCAGACG
CGGTCTGGACTCCGGCCATTCCTGCGGGTGTTTTCCAAGAGTGCGATAAA
CAAGGCTAGCGTTCCAGCCAAGGTCATTGCAAGAGTCGCATTTCAAAAGG
AGACGGTGGAGAACTGGGGAAGGGAACGATATTATATCTTGGATAGCGAA
TACGAGGCTGCATCCGTCATTCCGGCCTTGCGGGATGTGCCGCGCATGGA
TGGGCTGCTGCAGAAGGTTATGCGACAGATCGAGATAGGCGTCAAAGGCA
TGGGATCGCCTCAATCAAGAGTATCGCGGCTGACTGCTCATGGGAACTCC
ACTTGTTGGTACCGCTATTATCACCGGGGCGAATGGATTGCTCGGGTCGG
AGATAGCTGTCTCGATTGCCAAAGCACAGCCGTTTGTTCACTTGCTGCTG
GTGGCCCGCGATATCAGATCCGACAGCGTCAAGGATGTGACGGACAGGAT
CCGTCTCATCGGACCCCGCTCCGTCGAGGTGGTTAAAGCAGACCTTGCCT
GCTTTAACTCCGTCGTGAGCTTTTCCCAATACACCGTCGAGAGGGTACGA
AGTAAAGAGATCCCTCCCGTGATCTTGTTGATCAACTCCGCCGCAACTTC
GTCATACGTTACCGATCAAGTCACACGAGATGGGTACGATCCCGTCTACC
AGACCAACTGCATCGCGCCGTTCCTGTTGACTGTGAGCCTGCTCGAGGCC
TTCCGCGCAGGCGACGGTACACCGAACGGTGGTGCTCGAGTAATCAATAT
CGGGTGCTCCTCCATGTCCAAGGGATCCCTGGACTATTTTGACAGCGAAG
ACCCGGAGAGCGCTGCCCAGCCGCCAGGAACACCAATTGGCGCCAAGGAA
GCGACCAGTCGCTTCGGAAGTAGTAAGTTGTTAATGAGCGCTGCTATGTA
TGCCTTGCGTCGAAGTCTGGTACTTCTTTCAACCGCGCCCACAACCGGCT
TTGCGACGTCGAAGACAGCTCCTTCAACGACTCTGCCTTATTGCCGCCAT
TTCAACGCTGCTGTTGAACGGGCAACATCTCGCTCAATGTATACACAATG
GATCCCGGCGGTATGACCGGAGAGAGCCACCTAACGACCGATGCCCCGTT
ATCGGTCCGAATGGCACACCAGACGCGGTCTGGACTCCGGCCATTCCTGC
GGGTGTTTTCCAAGAGTGCGATAAACAAGGCTAGCGTTCCAGCCAAGGTC
ATTGCAAGAGTCGCATTTCAAAAGGAGACGGTGGAGAACTGGGGAAGGGA
ACGATATTATATCTTGGATAGCGAATACGAGGCTGCATCCGTCATTCCGG
CCTTGCGGGATGTGCCGCGCATGGATGGGCTGCTGCAGAAGGTTATGCGA
CAGATCGAGATAGGCGTCAAAGGCATGGGATCGCCTCAATCAAGAGTATC
GCGGCTGACTGCTCATGGGAACTCCACTTGTTGGTACCGCTATTATCACC
GGGGCGAATGGATTGCTCGGGTCGGAGATAGCTGTCTCGATTGCCAAAGC
ACAGCCGTTTGTTCACTTGCTGCTGGTGGCCCGCGATATCAGATCCGACA
GCGTCAAGGATGTGACGGACAGGATCCGTCTCATCGGACCCCGCTCCGTC
GAGGTGGTTAAAGCAGACCTTGCCTGCTTTAACTCCGTCGTGAGCTTTTC
CCAATACACCGTCGAGAGGGTACGAAGTAAAGAGATCCCTCCCGTGATCT
TGTTGATCAACTCCGCCGCAACTTCGTCATACGTTACCGATCAAGTCACA
CGAGATGGGTACGATCCCGTCTACCAGACCAACTGCATCGCGCCGTTCCT
GTTGACTGTGAGCCTGCTCGAGGCCTTCCGCGCAGGCGACGGTACACCGA
ACGGTGGTGCTCGAGTAATCAATATCGGGTGCTCCTCCATGTCCAAGGGA
TCCCTGGACTATTTTGACAGCGAAGACCCGGAGAGCGCTGCCCAGCCGCC
AGGAACACCAATTGGCGCCAAGGAAGCGACCAGTCGCTTCGGAAGTAGTA
AGTTGTTAATGAGCGCTGCTATGTATGCCTTGCGTCGAAGTCTGGTACTT
CTTTCAACCGCGCCCACAACCGGCTTTGCGACGTCGAAGACAGCTCCTTC
AACGACTCTGCCTTATTGCCGCCATTTCAACGCTGCTGTTGAACGGGCAA
CATCTCGCTCAATGTATACACAATGGATCCCGGCGGTATGACCGGAGAGA
GCCACCTAACGACCGATGCCCCGTTATCGGTCCGAATGGCACACCAGACG
CGGTCTGGACTCCGGCCATTCCTGCGGGTGTTTTCCAAGAGTGCGATAAA
CAAGGCTAGCGTTCCAGCCAAGGTCATTGCAAGAGTCGCATTTCAAAAGG
AGACGGTGGAGAACTGGGGAAGGGAACGATATTATATCTTGGATAGCGAA
TACGAGGCTGCATCCGTCATTCCGGCCTTGCGGGATGTGCCGCGCATGGA
TGGGCTGCTGCAGAAGGTTATGCGACAGATCGAGATAGGCGTCAAAGGCA
TGGGATCGCCTCAATCAAGAGTATCGCGGCTGACTGCTCATGGGAACTCC
ACTTGTTGGTACCGCTATTATCACCGGGGCGAATGGATTGCTCGGGTCGG
AGATAGCTGTCTCGATTGCCAAAGCACAGCCGTTTGTTCACTTGCTGCTG
GTGGCCCGCGATATCAGATCCGACAGCGTCAAGGATGTGACGGACAGGAT
CCGTCTCATCGGACCCCGCTCCGTCGAGGTGGTTAAAGCAGACCTTGCCT
GCTTTAACTCCGTCGTGAGCTTTTCCCAATACACCGTCGAGAGGGTACGA
AGTAAAGAGATCCCTCCCGTGATCTTGTTGATCAACTCCGCCGCAACTTC
GTCATACGTTACCGATCAAGTCACACGAGATGGGTACGATCCCGTCTACC
AGACCAACTGCATCGCGCCGTTCCTGTTGACTGTGAGCCTGCTCGAGGCC
TTCCGCGCAGGCGACGGTACACCGAACGGTGGTGCTCGAGTAATCAATAT
CGGGTGCTCCTCCATGTCCAAGGGATCCCTGGACTATTTTGACAGCGAAG
ACCCGGAGAGCGCTGCCCAGCCGCCAGGAACACCAATTGGCGCCAAGGAA
GCGACCAGTCGCTTCGGAAGTAGTAAGTTGTTAATGAGCGCTGCTATGTA
TGCCTTGCGTCGAAGTCTGGTACTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_32170CAN33_32170Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32170-T1CAN33_32170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32170-T1.cdsCAN33_32170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32170-T1.exon3CAN33_32170-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_32170-T1.exon2CAN33_32170-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_32170-T1.exon1CAN33_32170-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1514081..1516210 -
Powered by Drupal