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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1521442..1522779- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_32180-T1 ID=CAN33_32180-T1|Name=CAN33_32180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1338bp|location=Sequence derived from alignment at NKJJ01000003.1:1521442..1522779- (Aspergillus niger FDAARGOS_311)
ATGGCCATCAACTCTGCCCCCGAGTCCTCCCTCCTTTCCCTCCTCTACCG
CTCCTACCCTACCGCCATCTCCCCCGACGCCACGGAGCCCGACCTTCACA
CGGCCACCCCCAAAATCTTTCCGCAGACTAGCTTTTCCGTCGCCGAAGAG
GCCGACGTCAAGCAATGGCTGGCCACCATCTCCGGTCTGCAGACCGCTCT
CAGCAAGGATGACAAGCCCGTCGTCTCGACCATCCTCTCCCAGCTGAACT
CTCACCTCGCCACCCGCACAACCCTGCTCGGTGCGAAGCCCTCCGTGGCT
GATATTGCCGTCTACGCTCTCGTCGCTCCTCTCGTCGAGAAATGGACCCC
CGAGGAGCGTACCGGCGAGCAGGGCTACCACCACATCGTCCGTCACGTCG
ACTTCGTCCAGAACAGCCGCATTTTCGCTCTACAGATCCCCGACGAGGAG
AAGGTCACCATTGACGTGAACGACGTTCGCTTCGTGCCCAAGCCCGTCGA
CCCCAAGGAGGAGAAGGAGCGCAAGAAGAAGGAGAAGGCCGCTGCCCAGA
AGCCCGAGGCTGCTGGCAAGCCCCTCGTTGTCGGTCAGGGCAAGCCCGAG
GCTGCGGCCAAGGCCGACGGTGCTAAGGGTGACGCCGCCGCCGCTGCTAA
GCCCGAGGGCAAGCCCAAGAAGGAGAAGAAGGAAAAGAAGGAGAAGCCGG
CCAAGGCTGCGCCCGCCCCTGCTGCTCCCCCGTCTCCCTCCGTCATTGAC
CTCCGTGTTGGTCACATTCTTCGTGCCGTCAACCACCCCAACGCCGACTC
CCTCTACGTCTCGACCATCGACTGCGGTGACGCCCCGGGCACCGAGAACA
CCTCTCTGGATGAGGCCACAGGCAAGACCGTCCGCACGGTGTGCTCCGGC
CTGAACGGTCTGATTCCCCTGGAGGAGATGCAGAACCGCAAGATTGTCGC
CGTCTGCAACCTGAAGCCCGTCACCATGCGTGGCATCAAGTCCTGCGCCA
TGGTTTTGGCTGCCTCTCCCCGCGTGGCTGAGGGCGAGGACTCGCACGCT
GGACCCGTCGAGCTCGTTTCGCCTCCTGCCGATGCCCCTGCCGGTGAGCG
CGTGTGCTTCGAGGGCTGGACCGAGGGTGAGCCCGAGAAGGTGCTCAACC
CTAAGAAGAAGGTCTGGGAGACCTACCAGCCTGGTTTCACCACCACCGAT
GACCTCGAGGTCGCCTTTGAGATGTCTGCCGTTCCGGCCGTGCAGGGCCA
GGAGGGCAAGCCCGCTCTGGGTAAGTTGAAGACGCAGTCCGGTGGACTTT
GCACAGTCAAGAGCCTGAAGGGAGCGGCTGTCCGGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1521442..1522779- >CAN33_32180-T1 ID=CAN33_32180-T1|Name=CAN33_32180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1338bp|location=Sequence derived from alignment at NKJJ01000003.1:1521442..1522779- (Aspergillus niger FDAARGOS_311)
ATGGCCATCAACTCTGCCCCCGAGTCCTCCCTCCTTTCCCTCCTCTACCG
CTCCTACCCTACCGCCATCTCCCCCGACGCCACGGAGCCCGACCTTCACA
CGGCCACCCCCAAAATCTTTCCGCAGACTAGCTTTTCCGTCGCCGAAGAG
GCCGACGTCAAGCAATGGCTGGCCACCATCTCCGGTCTGCAGACCGCTCT
CAGCAAGGATGACAAGCCCGTCGTCTCGACCATCCTCTCCCAGCTGAACT
CTCACCTCGCCACCCGCACAACCCTGCTCGGTGCGAAGCCCTCCGTGGCT
GATATTGCCGTCTACGCTCTCGTCGCTCCTCTCGTCGAGAAATGGACCCC
CGAGGAGCGTACCGGCGAGCAGGGCTACCACCACATCGTCCGTCACGTCG
ACTTCGTCCAGAACAGCCGCATTTTCGCTCTACAGATCCCCGACGAGGAG
AAGGTCACCATTGACGTGAACGACGTTCGCTTCGTGCCCAAGCCCGTCGA
CCCCAAGGAGGAGAAGGAGCGCAAGAAGAAGGAGAAGGCCGCTGCCCAGA
AGCCCGAGGCTGCTGGCAAGCCCCTCGTTGTCGGTCAGGGCAAGCCCGAG
GCTGCGGCCAAGGCCGACGGTGCTAAGGGTGACGCCGCCGCCGCTGCTAA
GCCCGAGGGCAAGCCCAAGAAGGAGAAGAAGGAAAAGAAGGAGAAGCCGG
CCAAGGCTGCGCCCGCCCCTGCTGCTCCCCCGTCTCCCTCCGTCATTGAC
CTCCGTGTTGGTCACATTCTTCGTGCCGTCAACCACCCCAACGCCGACTC
CCTCTACGTCTCGACCATCGACTGCGGTGACGCCCCGGGCACCGAGAACA
CCTCTCTGGATGAGGCCACAGGCAAGACCGTCCGCACGGTGTGCTCCGGC
CTGAACGGTCTGATTCCCCTGGAGGAGATGCAGAACCGCAAGATTGTCGC
CGTCTGCAACCTGAAGCCCGTCACCATGCGTGGCATCAAGTCCTGCGCCA
TGGTTTTGGCTGCCTCTCCCCGCGTGGCTGAGGGCGAGGACTCGCACGCT
GGACCCGTCGAGCTCGTTTCGCCTCCTGCCGATGCCCCTGCCGGTGAGCG
CGTGTGCTTCGAGGGCTGGACCGAGGGTGAGCCCGAGAAGGTGCTCAACC
CTAAGAAGAAGGTCTGGGAGACCTACCAGCCTGGTTTCACCACCACCGAT
GACCTCGAGGTCGCCTTTGAGATGTCTGCCGTTCCGGCCGTGCAGGGCCA
GGAGGGCAAGCCCGCTCTGGGTAAGTTGAAGACGCAGTCCGGTGGACTTT
GCACAGTCAAGAGCCTGAAGGGAGCGGCTGTCCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000049 | tRNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263JFQ |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR002547 |
| DBxref | PFAM:PF01588 |
| Product | putative tRNA binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1521442..1522779 - |
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