CAN33_32260-T1, CAN33_32260-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_32260-T1
Unique Name	CAN33_32260-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1574319..1575928+
coding sequence from alignment at NKJJ01000003.1:1574319..1575928+

mRNA from alignment at NKJJ01000003.1:1574319..1575928+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_32260-T1 ID=CAN33_32260-T1|Name=CAN33_32260-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1610bp|location=Sequence derived from alignment at NKJJ01000003.1:1574319..1575928+ (Aspergillus niger FDAARGOS_311)
ATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTC
TACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCG
GAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAG
GACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATA
TTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGA
TCCTGATACGAGATCTGTGGGTTCGTGAGGCAAGACTTGACCCCTTCCTC
GGTGACAGACTGACGCTTTGACTGCAGATAAGGAACTTCAAAGGAGACCC
GTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCC
TGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCAC
TTTGAGCCATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAG
CCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCAC
GTGGCTCCTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCG
CACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGA
CCTCGTGGGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCG
TCCTCTATTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAA
ATAAACGATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACGG
TTACCAAAAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGA
CCCTCACAATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACAT
CTGAAGGATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAG
TCGCATCAATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAATC
CAAATTCAGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTC
GAACAATTTCTGCAGCGTAAGACGGAATACTGGAAAGCGAATCCTCGGAA
GCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGA
AACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAATA
GCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAACAGTAAGTCATGCCG
TCTTAGTAATAACCACTGGGGCATCTTACAGTTGATTGACAGTCTATGAT
AGTCATAGCAGGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCC
TTTCCAACAAACTTCATGACAACATCTCATATGACAACATACAGTACCGC
TTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGTGTGGTCGATTT
CTTCCCCCCACGACTGGAAGACTTCTCCGTCCCGAAGACTCCTCGGGTGA
GGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGCT
TCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAAA
GAACAGATGA

Coding sequence (CDS) from alignment at NKJJ01000003.1:1574319..1575928+

>CAN33_32260-T1 ID=CAN33_32260-T1|Name=CAN33_32260-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4464bp|location=Sequence derived from alignment at NKJJ01000003.1:1574319..1575928+ (Aspergillus niger FDAARGOS_311)
ATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTC
TACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCG
GAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAG
GACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATA
TTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGA
TCCTGATACGAGATCTGTGGATAAGGAACTTCAAAGGAGACCCGTTGGGA
GTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCC
GGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGC
CATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACT
GCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTC
CTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGA
GGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTG
GGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTA
TTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACG
ATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAA
AAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGACCCTCAC
AATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGG
ATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATC
AATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAATCCAAATTC
AGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAAT
TTCTGCAGCGTAAGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAA
CTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCG
AAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAATAGCAGCAA
GCAGCAAGCGATATGCGCCAAATGAAAACATCATAGCAGGCAGCCCGTCC
GTCCCTACAATGTCCCTGGAAGCGATCCTTTCCAACAAACTTCATGACAA
CATCTCATATGACAACATACAGTACCGCTTCCCCTTTCAAAACTTCTGCT
ACCGAACCACAGTCCGTGTGGTCGATTTCTTCCCCCCACGACTGGAAGAC
TTCTCCGTCCCGAAGACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCC
GATCGTTTCATTAGATGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGT
CCCTCCTCCACCCGCAGGTCAAGCGAAAGAACAGATGAATGTCAGGCGGC
TATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTCTACGCAGGGCAA
AGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCGGAATATGGAAGT
CTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAGGACTCAGGTCTT
GACAACGGACATACATGGGACGGGTTGAAAATCAAATATTTCAAAGACAA
TGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGATCCTGATACGAG
ATCTGTGGATAAGGAACTTCAAAGGAGACCCGTTGGGAGTCGCTGCCCAG
GACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCCGGATCCCACGTC
TAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGCCATCTCCTTCAG
AGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACTGCAGTCGATGGT
TTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTCCTATATTGTCCA
GGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGAGGCTTTCTCTTG
TCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTGGGGCAAATTGTC
AAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTATTTCACCGATTA
CACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACGATGCCGGTGACA
ATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAAAAACGACCCAAG
AAGAAATGGACAGGACCAGTTGGACGGATGACCCTCACAATCACACTCTG
GGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGGATAACGATCTCA
TCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATCAATGGGATATTA
GAAGCCAGTATCCACACAAACCGCACGAATCCAAATTCAGTCAATGTACA
CACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAATTTCTGCAGCGTA
AGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAACTCGAAAACGAA
GGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCGAAAGAAAGCCGA
AAAGGTGGAAGAAGGCCAAGTTCCCATAATAGCAGCAAGCAGCAAGCGAT
ATGCGCCAAATGAAAACATCATAGCAGGCAGCCCGTCCGTCCCTACAATG
TCCCTGGAAGCGATCCTTTCCAACAAACTTCATGACAACATCTCATATGA
CAACATACAGTACCGCTTCCCCTTTCAAAACTTCTGCTACCGAACCACAG
TCCGTGTGGTCGATTTCTTCCCCCCACGACTGGAAGACTTCTCCGTCCCG
AAGACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCCGATCGTTTCATT
AGATGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACC
CGCAGGTCAAGCGAAAGAACAGATGAATGTCAGGCGGCTATGCCTCCCGG
TTCGTGGATGTGTCCACCGCACTCTCTACGCAGGGCAAAGTAAGTGTCAT
TGGCGTCGTAGTCGACGTCTTCGGCGGAATATGGAAGTCTAGAGGCTCGT
CCAGCTGTATTACCTTCACCATCAAGGACTCAGGTCTTGACAACGGACAT
ACATGGGACGGGTTGAAAATCAAATATTTCAAAGACAATGAGAGCCATTT
ACCTCCCGTCCAACTACGCGACGTGATCCTGATACGAGATCTGTGGATAA
GGAACTTCAAAGGAGACCCGTTGGGAGTCGCTGCCCAGGACAGAGAAGTA
CCATGGGCAATCTTTCGCCTGGACCCGGATCCCACGTCTAGCCCTGCGCC
CCTTTGTGGCCCTACGCACTTTGAGCCATCTCCTTCAGAGAAGATACATG
CTTTGAATTTGTTGAATAGCCTCACTGCAGTCGATGGTTTTCGCAAAGCT
CCAGCACAAGATACTCCACGTGGCTCCTATATTGTCCAGGCTGCAATTCC
AAATTCCAAACCTTACCCGCACAAGAGGCTTTCTCTTGTCAAGGATATTG
TAGAGCGAAATTATGTTGACCTCGTGGGGCAAATTGTCAAGGTCTATACC
AACGACAGTGAAAAGGTCGTCCTCTATTTCACCGATTACACGGCCAACGA
TGGTCTCGAAGACCGCCAAATAAACGATGCCGGTGACAATGACTTTGGCA
CTGAAGGAGATATCTACGGTTACCAAAAACGACCCAAGAAGAAATGGACA
GGACCAGTTGGACGGATGACCCTCACAATCACACTCTGGGAACCCCATGC
ATCCTATGCGCGCCAACATCTGAAGGATAACGATCTCATCCAGCTATACA
ATGTGCATGTCAAGCGCAGTCGCATCAATGGGATATTAGAAGCCAGTATC
CACACAAACCGCACGAATCCAAATTCAGTCAATGTACACACCCTGGATCG
TCGCAAAGACACGTTTGTCGAACAATTTCTGCAGCGTAAGACGGAATACT
GGAAAGCGAATCCTCGGAAGCGGGAACTCGAAAACGAAGGCCAGCAGGTT
TCGAAGAAAAGCACCAAGAAACAGCGAAAGAAAGCCGAAAAGGTGGAAGA
AGGCCAAGTTCCCATAATAGCAGCAAGCAGCAAGCGATATGCGCCAAATG
AAAACATCATAGCAGGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCG
ATCCTTTCCAACAAACTTCATGACAACATCTCATATGACAACATACAGTA
CCGCTTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGTGTGGTCG
ATTTCTTCCCCCCACGACTGGAAGACTTCTCCGTCCCGAAGACTCCTCGG
GTGAGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGG
CGCTTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGC
GAAAGAACAGATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000784	nuclear chromosome, telomeric region

Vocabulary: **Molecular Function**
Term	Definition
GO:0043047	single-stranded telomeric DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0000723	telomere maintenance

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_32260	CAN33_32260	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_32260-T1.exon1	CAN33_32260-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_32260-T1.exon2	CAN33_32260-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_32260-T1.exon3	CAN33_32260-T1.exon3	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_32260-T1.cds	CAN33_32260-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_32260-T1	CAN33_32260-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
Note	EggNog:ENOG41
DBxref	InterPro:IPR012340
DBxref	InterPro:IPR032042
DBxref	InterPro:IPR011564
DBxref	PFAM:PF16686
DBxref	PFAM:PF02765
Product	Telomeric single stranded DNA binding POT1/CDC13 family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000003.1	supercontig	NKJJ01000003.1:1574319..1575928 +

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CAN33_32260-T1, CAN33_32260-T1 (mRNA) Aspergillus niger FDAARGOS_311