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CAN33_32270-T1, CAN33_32270-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_32270-T1
Unique NameCAN33_32270-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1579097..1580016+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_32270-T1 ID=CAN33_32270-T1|Name=CAN33_32270-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=920bp|location=Sequence derived from alignment at NKJJ01000003.1:1579097..1580016+ (Aspergillus niger FDAARGOS_311)
ATGGGTCGCTTTGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTT
GATTGGCGGCAGTCTCGCGGCGGTACGTTCCCTCTCGCGTGACTCCCATC
GTCCCACTGTCAATTGAGTTGCTGACGCGATGTCGCATGTTACTAGGATG
CTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTGCTTTCTGTCACGGCC
CACGCCTCCTTCCCTGCCTCCGAGATCTTTGGTGTCAAGCTTGTCAATGG
CTACCCGACCGAGGCGCTGATCACTTTCGCCAATGAGGAGGAATCTCCCG
TGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCAGTTGAAGGAGAAAGC
AGCCAGATTGTTCGCAACCTGACTGCGCACCGTTACAGCGTTGAGATCCC
GGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCGCCACCGAAATGCACC
CCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATCTCTGATACCGATGGC
AACCTCTTCACTCTCTACGCCTACAACGGCACTGTCAGCGTTGTTGAGCC
GGAGACCAGCATCTTTGACCCTCAGATGTAAGGCACTTTTCTCACAGCTC
GCCGATAAGGCCAAGCTAACCCTATTGTTATTAGCCTCTTCCTGTACTTC
TTCCTCCTGGCTTGCTTCTCTGGCGTCGTCTACTTCTTCTACACCGTCTG
GATCGCTCCCTACTTCCCCCAGAAGCGCCGCGCTGGAAAGGGCCCCGAGT
ACAAGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTGAGGCTCCC
AGCAGCCCTGCTGTCTCGTCTGCCACTACCTACAACGCCGAGTGGATCCC
CGCTCACCACATCAACCGTCCTGAGGCCAGGAAGGTCAAGGGTAGCGCCA
AGGCTAAGAACCGTGCCTAA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:1579097..1580016+

>CAN33_32270-T1 ID=CAN33_32270-T1|Name=CAN33_32270-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2367bp|location=Sequence derived from alignment at NKJJ01000003.1:1579097..1580016+ (Aspergillus niger FDAARGOS_311)
ATGGGTCGCTTTGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTT
GATTGGCGGCAGTCTCGCGGCGGATGCTGCTGAGAAGGAGGATCTCCCTG
AAACCCAATTGCTTTCTGTCACGGCCCACGCCTCCTTCCCTGCCTCCGAG
ATCTTTGGTGTCAAGCTTGTCAATGGCTACCCGACCGAGGCGCTGATCAC
TTTCGCCAATGAGGAGGAATCTCCCGTGACTGTGAACTTCATTGGTGGTT
CCTTGTCGGCAGTTGAAGGAGAAAGCAGCCAGATTGTTCGCAACCTGACT
GCGCACCGTTACAGCGTTGAGATCCCGGCCGGTCAGCAGGAGAGCGTCAG
CTACAGCTTCGCCACCGAAATGCACCCCCAGGATTTGCTGCTCACCCTCG
CTTCCGTCATCTCTGATACCGATGGCAACCTCTTCACTCTCTACGCCTAC
AACGGCACTGTCAGCGTTGTTGAGCCGGAGACCAGCATCTTTGACCCTCA
GATCCTCTTCCTGTACTTCTTCCTCCTGGCTTGCTTCTCTGGCGTCGTCT
ACTTCTTCTACACCGTCTGGATCGCTCCCTACTTCCCCCAGAAGCGCCGC
GCTGGAAAGGGCCCCGAGTACAAGAAGTCCGCTGGTGCCTCCAAGAAGGA
GGCCCCCGTTGAGGCTCCCAGCAGCCCTGCTGTCTCGTCTGCCACTACCT
ACAACGCCGAGTGGATCCCCGCTCACCACATCAACCGTCCTGAGGCCAGG
AAGGTCAAGGGTAGCGCCAAGGCTAAGAACCGTGCCTAAATGGGTCGCTT
TGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTTGATTGGCGGCA
GTCTCGCGGCGGATGCTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTG
CTTTCTGTCACGGCCCACGCCTCCTTCCCTGCCTCCGAGATCTTTGGTGT
CAAGCTTGTCAATGGCTACCCGACCGAGGCGCTGATCACTTTCGCCAATG
AGGAGGAATCTCCCGTGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCA
GTTGAAGGAGAAAGCAGCCAGATTGTTCGCAACCTGACTGCGCACCGTTA
CAGCGTTGAGATCCCGGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCG
CCACCGAAATGCACCCCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATC
TCTGATACCGATGGCAACCTCTTCACTCTCTACGCCTACAACGGCACTGT
CAGCGTTGTTGAGCCGGAGACCAGCATCTTTGACCCTCAGATCCTCTTCC
TGTACTTCTTCCTCCTGGCTTGCTTCTCTGGCGTCGTCTACTTCTTCTAC
ACCGTCTGGATCGCTCCCTACTTCCCCCAGAAGCGCCGCGCTGGAAAGGG
CCCCGAGTACAAGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTG
AGGCTCCCAGCAGCCCTGCTGTCTCGTCTGCCACTACCTACAACGCCGAG
TGGATCCCCGCTCACCACATCAACCGTCCTGAGGCCAGGAAGGTCAAGGG
TAGCGCCAAGGCTAAGAACCGTGCCTAAATGGGTCGCTTTGGTTTCTTGT
CCCTGGCTCTCCTTTCTGTCCAGGCCTTGATTGGCGGCAGTCTCGCGGCG
GATGCTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTGCTTTCTGTCAC
GGCCCACGCCTCCTTCCCTGCCTCCGAGATCTTTGGTGTCAAGCTTGTCA
ATGGCTACCCGACCGAGGCGCTGATCACTTTCGCCAATGAGGAGGAATCT
CCCGTGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCAGTTGAAGGAGA
AAGCAGCCAGATTGTTCGCAACCTGACTGCGCACCGTTACAGCGTTGAGA
TCCCGGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCGCCACCGAAATG
CACCCCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATCTCTGATACCGA
TGGCAACCTCTTCACTCTCTACGCCTACAACGGCACTGTCAGCGTTGTTG
AGCCGGAGACCAGCATCTTTGACCCTCAGATCCTCTTCCTGTACTTCTTC
CTCCTGGCTTGCTTCTCTGGCGTCGTCTACTTCTTCTACACCGTCTGGAT
CGCTCCCTACTTCCCCCAGAAGCGCCGCGCTGGAAAGGGCCCCGAGTACA
AGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTGAGGCTCCCAGC
AGCCCTGCTGTCTCGTCTGCCACTACCTACAACGCCGAGTGGATCCCCGC
TCACCACATCAACCGTCCTGAGGCCAGGAAGGTCAAGGGTAGCGCCAAGG
CTAAGAACCGTGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_32270CAN33_32270Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32270-T1.exon1CAN33_32270-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_32270-T1.exon2CAN33_32270-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_32270-T1.exon3CAN33_32270-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32270-T1.cdsCAN33_32270-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32270-T1CAN33_32270-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-23)
DBxrefInterPro:IPR005595
DBxrefPFAM:PF03896
ProductTranslocon-associated protein (TRAP) alpha subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1579097..1580016 +
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