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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1580380..1581329- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_32275-T1 ID=CAN33_32275-T1|Name=CAN33_32275-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=950bp|location=Sequence derived from alignment at NKJJ01000003.1:1580380..1581329- (Aspergillus niger FDAARGOS_311)
ATGGCTGACTCTCCAACTCTGGAGCTCGACAGCCCCACAGAACAGGATGT
CGCGCCCGCAGAAGCGCAGCAGCCACCGCCCAAGCCAGCGAAAAGAGACG
CCTGTACGCTCCGAACACAAACACCGATTCACCCCTCTCCCTCCCCTTGC
ATACCAGACGCAGGAACCACTAACTGATTATTCCTATCTCAGTTACAGAA
CTACTTGCTCCGAAACCTAAACATCCCAAACATGGCGATCCTAGCACCTC
CAAACACACTCCTACTACCTCGAAAAGGCGAGCCATCGGTGGCCCCCGAG
ACGGCCTAGGCGTCTACATCGCGAAACCAGAAACCTTCCCCTCCAACGTA
GTAGTATACTACGACGATGATTTCGTCGTCATTCACGACATGTTCCCCAA
GGCAACCCTCCACCTCCTACTTCTCCCACGAGATCCTCAGAAAACGCGCC
TCCATCCATTCGAAGCCTTCGAGGACGCCGACTTCCTGGCAAAAGTGAAA
AGGGAAACGCAGAAGCTCCGCAAACTCGCGGCTGGTGAGCTCAGACGAAT
ACATGGGAAATACTCGGCGCAGGATAAGGAAAGACAGGAGGCCCTGAATG
TAGAACCACCGCTGGAGGAGCTGCCGCCGGGGAGGAACTGGGAGCAAGAG
ATCATGTGTGGAATTCATGCGCATCCCTCCATGAATCACTTGCATGTGCA
CGTTATCTCCGTGGATCGGTTCAGCGATCGTCTCAAGCATAGGAAACATT
ACAATAGCTTTTCTACACCGTTTTTCGTCAAAATTGATGATTTCCCACTG
GCGCCGGATGATGTGCGGAGGCATCCCGATGAACAAGGCTACCTGCGCAG
GGATTTTGTCTGTTGGCGCTGTGGGAAGCAATTTGGGAACAAATTCGCCG
AGTTGAAGCTACATTTAAAGGAGGAGTTTGATGCATGGAGAAAGCTGTGA
back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1580380..1581329- >CAN33_32275-T1 ID=CAN33_32275-T1|Name=CAN33_32275-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1722bp|location=Sequence derived from alignment at NKJJ01000003.1:1580380..1581329- (Aspergillus niger FDAARGOS_311)
TTACAGAACTACTTGCTCCGAAACCTAAACATCCCAAACATGGCGATCCT
AGCACCTCCAAACACACTCCTACTACCTCGAAAAGGCGAGCCATCGGTGG
CCCCCGAGACGGCCTAGGCGTCTACATCGCGAAACCAGAAACCTTCCCCT
CCAACGTAGTAGTATACTACGACGATGATTTCGTCGTCATTCACGACATG
TTCCCCAAGGCAACCCTCCACCTCCTACTTCTCCCACGAGATCCTCAGAA
AACGCGCCTCCATCCATTCGAAGCCTTCGAGGACGCCGACTTCCTGGCAA
AAGTGAAAAGGGAAACGCAGAAGCTCCGCAAACTCGCGGCTGGTGAGCTC
AGACGAATACATGGGAAATACTCGGCGCAGGATAAGGAAAGACAGGAGGC
CCTGAATGTAGAACCACCGCTGGAGGAGCTGCCGCCGGGGAGGAACTGGG
AGCAAGAGATCATGTGTGGAATTCATGCGCATCCCTCCATGAATCACTTG
CATGTGCACGTTATCTCCGTGGATCGGTTCAGCGATCGTCTCAAGCATAG
GAAACATTACAATAGCTTTTCTACACCGTTTTTCGTCAAAATTGATGATT
TCCCACTGGCGCCGGATGATGTGCGGAGGCATCCCGATGAACAAGGCTAC
CTGCGCAGGGATTTTGTCTGTTGGCGCTGTGGGAAGCAATTTGGGAACAA
ATTCGCCGAGTTGAAGCTACATTTAAAGGAGGAGTTTGATGCATGGAGAA
AGCTGTGAATGGCTGACTCTCCAACTCTGGAGCTCGACAGCCCCACAGAA
CAGGATGTCGCGCCCGCAGAAGCGCAGCAGCCACCGCCCAAGCCAGCGAA
AAGAGACGCCTTTACAGAACTACTTGCTCCGAAACCTAAACATCCCAAAC
ATGGCGATCCTAGCACCTCCAAACACACTCCTACTACCTCGAAAAGGCGA
GCCATCGGTGGCCCCCGAGACGGCCTAGGCGTCTACATCGCGAAACCAGA
AACCTTCCCCTCCAACGTAGTAGTATACTACGACGATGATTTCGTCGTCA
TTCACGACATGTTCCCCAAGGCAACCCTCCACCTCCTACTTCTCCCACGA
GATCCTCAGAAAACGCGCCTCCATCCATTCGAAGCCTTCGAGGACGCCGA
CTTCCTGGCAAAAGTGAAAAGGGAAACGCAGAAGCTCCGCAAACTCGCGG
CTGGTGAGCTCAGACGAATACATGGGAAATACTCGGCGCAGGATAAGGAA
AGACAGGAGGCCCTGAATGTAGAACCACCGCTGGAGGAGCTGCCGCCGGG
GAGGAACTGGGAGCAAGAGATCATGTGTGGAATTCATGCGCATCCCTCCA
TGAATCACTTGCATGTGCACGTTATCTCCGTGGATCGGTTCAGCGATCGT
CTCAAGCATAGGAAACATTACAATAGCTTTTCTACACCGTTTTTCGTCAA
AATTGATGATTTCCCACTGGCGCCGGATGATGTGCGGAGGCATCCCGATG
AACAAGGCTACCTGCGCAGGGATTTTGTCTGTTGGCGCTGTGGGAAGCAA
TTTGGGAACAAATTCGCCGAGTTGAAGCTACATTTAAAGGAGGAGTTTGA
TGCATGGAGAAAGCTGTGAATGGCTGACTCTCCAACTCTGGAGCTCGACA
GCCCCACAGAACAGGATGTCGCGCCCGCAGAAGCGCAGCAGCCACCGCCC
AAGCCAGCGAAAAGAGACGCCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001310 |
| DBxref | InterPro:IPR036265 |
| DBxref | InterPro:IPR032566 |
| DBxref | PFAM:PF16278 |
| DBxref | PFAM:PF01230 |
| DBxref | PFAM:PF11969 |
| Product | HIT domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1580380..1581329 - |
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