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CAN33_32355-T1, CAN33_32355-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_32355-T1
Unique NameCAN33_32355-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1644699..1646012-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_32355-T1 ID=CAN33_32355-T1|Name=CAN33_32355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1314bp|location=Sequence derived from alignment at NKJJ01000003.1:1644699..1646012- (Aspergillus niger FDAARGOS_311)
ATGCTTTTCGTCACGGCATCGGCTAACCAGGAGCTCAAGATCTGGGATCT
CTTCGAAGATCATCACCTATTTGACGGCAGGGGACTAGACGGTGGCCATT
CAGATGCACAGCTTCTGACTGAGATGGTAGTAGCGATGCTCGGGCCTCTA
CCAATGGAATTTCTTCGTGTATCACCTCGCAGCCTGGAATACTGGGACAC
ATCAGGTAGGTACGGATGGACTTCATCCATCAGACAATCAATAATAGGTC
AATAGAAAGCTTCTGACGAAATCCCATCCATCTTATTGGATGACTTGGAA
GAATACCGAGAGGGCGATAACAAGCAGATGTTCATACAATTTGTGAGGAA
GATGCTTCAATGAGACCCAGAAGAGAGACAGAGCGCCCGTGAACTAATTG
ACAGAACCTTGATTAGCAAGCCCTTAATACACTGTATCATCATTAGGTCA
AGTTATGTACAATAAATCAAACAATGAAAAAGTATGATCAAAGTAACGAA
CAATGCTTGAAGATTTCTGAAGCTAGACTTAGTTCACCAACCACTAAACG
CTAAGTACGTAGAATCCCACTAGGCGCGACCGCCCGACGAACGGCTCTCG
GGTGACCCTCTCACCCCGTGCAACAACGCCCCAGTTGCTCAGGGCGTTAA
CTATGCCTCGGCTCAACTCGGTAGCTCCAACCTTCCCATCCATCAGTCCA
TCCCCTCATCTACCATCTATACACATTGAACTTCACCAACCCAACTTTAA
CACCTACCATACCTCCAACCAATCCTACAATCCACCTATACACACGCCAA
CCCAACCCATAATGTCCACCTCAATAGCGCTCAAAAAGCGCCGCCTCCGA
AGCGACTACATCTATCACCAAACCCACCGAACAAGATGGTGAGCCTCCCC
TCCTTCCCTTCCCCCAATAACCCCCTCTAACAAACCCCCCAAAAAAACAG
GTTCGACAACGACATGTACGCCCACCTCAACAACACCGTCTATGCGATGC
TCTTCGACAGCATAATAAACACGTACCTGATCACCCACTGCGGAATGGAT
CCCTTCACGCACAACAACCCCACCCTTACGACACCCACGCCCTCCTCTTC
CTCTTCCACACCCTCCTCCTTTAAATCCTCTCAAGTGGGCATAATGGTCT
CCTCCTACTGCGACTACTTCTCATCGGTTTCATTTCCGGATATCTTGGAC
CTAGGGCTGCGAGTCACGAAGCTGGGGAATAGCAGCGTGACGTATGAAGT
TGGAGTGTTCAAGGAAGGGGAGGAAGAGGTGAAGGTTGTTGGGGGTATAC
GCATGTTTTTGTAG
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Coding sequence (CDS) from alignment at NKJJ01000003.1:1644699..1646012-

>CAN33_32355-T1 ID=CAN33_32355-T1|Name=CAN33_32355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1890bp|location=Sequence derived from alignment at NKJJ01000003.1:1644699..1646012- (Aspergillus niger FDAARGOS_311)
GTTCGACAACGACATGTACGCCCACCTCAACAACACCGTCTATGCGATGC
TCTTCGACAGCATAATAAACACGTACCTGATCACCCACTGCGGAATGGAT
CCCTTCACGCACAACAACCCCACCCTTACGACACCCACGCCCTCCTCTTC
CTCTTCCACACCCTCCTCCTTTAAATCCTCTCAAGTGGGCATAATGGTCT
CCTCCTACTGCGACTACTTCTCATCGGTTTCATTTCCGGATATCTTGGAC
CTAGGGCTGCGAGTCACGAAGCTGGGGAATAGCAGCGTGACGTATGAAGT
TGGAGTGTTCAAGGAAGGGGAGGAAGAGGTGAAGGTTGTTGGGGGTATAC
GCATGTTTTTGTAGCGCTCAAAAAGCGCCGCCTCCGAAGCGACTACATCT
ATCACCAAACCCACCGAACAAGATGATGCTTTTCGTCACGGCATCGGCTA
ACCAGGAGCTCAAGATCTGGGATCTCTTCGAAGATCATCACCTATTTGAC
GGCAGGGGACTAGACGGTGGCCATTCAGATGCACAGCTTCTGACTGAGAT
GGTAGTAGCGATGCTCGGGCCTCTACCAATGGAATTTCTTCGTGTATCAC
CTCGCAGCCTGGAATACTGGGACACATCAGGTTCGACAACGACATGTACG
CCCACCTCAACAACACCGTCTATGCGATGCTCTTCGACAGCATAATAAAC
ACGTACCTGATCACCCACTGCGGAATGGATCCCTTCACGCACAACAACCC
CACCCTTACGACACCCACGCCCTCCTCTTCCTCTTCCACACCCTCCTCCT
TTAAATCCTCTCAAGTGGGCATAATGGTCTCCTCCTACTGCGACTACTTC
TCATCGGTTTCATTTCCGGATATCTTGGACCTAGGGCTGCGAGTCACGAA
GCTGGGGAATAGCAGCGTGACGTATGAAGTTGGAGTGTTCAAGGAAGGGG
AGGAAGAGGTGAAGGTTGTTGGGGGTATACGCATGTTTTTGTAGCGCTCA
AAAAGCGCCGCCTCCGAAGCGACTACATCTATCACCAAACCCACCGAACA
AGATGATGCTTTTCGTCACGGCATCGGCTAACCAGGAGCTCAAGATCTGG
GATCTCTTCGAAGATCATCACCTATTTGACGGCAGGGGACTAGACGGTGG
CCATTCAGATGCACAGCTTCTGACTGAGATGGTAGTAGCGATGCTCGGGC
CTCTACCAATGGAATTTCTTCGTGTATCACCTCGCAGCCTGGAATACTGG
GACACATCAGGTTCGACAACGACATGTACGCCCACCTCAACAACACCGTC
TATGCGATGCTCTTCGACAGCATAATAAACACGTACCTGATCACCCACTG
CGGAATGGATCCCTTCACGCACAACAACCCCACCCTTACGACACCCACGC
CCTCCTCTTCCTCTTCCACACCCTCCTCCTTTAAATCCTCTCAAGTGGGC
ATAATGGTCTCCTCCTACTGCGACTACTTCTCATCGGTTTCATTTCCGGA
TATCTTGGACCTAGGGCTGCGAGTCACGAAGCTGGGGAATAGCAGCGTGA
CGTATGAAGTTGGAGTGTTCAAGGAAGGGGAGGAAGAGGTGAAGGTTGTT
GGGGGTATACGCATGTTTTTGTAGCGCTCAAAAAGCGCCGCCTCCGAAGC
GACTACATCTATCACCAAACCCACCGAACAAGATGATGCTTTTCGTCACG
GCATCGGCTAACCAGGAGCTCAAGATCTGGGATCTCTTCGAAGATCATCA
CCTATTTGACGGCAGGGGACTAGACGGTGGCCATTCAGATGCACAGCTTC
TGACTGAGATGGTAGTAGCGATGCTCGGGCCTCTACCAATGGAATTTCTT
CGTGTATCACCTCGCAGCCTGGAATACTGGGACACATCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_32355CAN33_32355Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32355-T1CAN33_32355-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32355-T1.cdsCAN33_32355-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32355-T1.exon3CAN33_32355-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_32355-T1.exon2CAN33_32355-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_32355-T1.exon1CAN33_32355-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR029069
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR006683
DBxrefPFAM:PF03061
ProductThioesterase superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1644699..1646012 -
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